RNA–Protein interactions for RNA: YPL174C

NIP100, Transcript of Large subunit of the dynactin complex, yeastyeast

Gene NIP100, Length 2,607 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NIP100YPL174C CDC26P14724 124 aa1.96□□□□□ -2.1
NIP100YPL174C MF(ALPHA)2P32435 120 aa1.96□□□□□ -2.1
NIP100YPL174C SDS22P36047 338 aa1.96□□□□□ -2.1
NIP100YPL174C TAF5P38129 798 aa1.96□□□□□ -2.1
NIP100YPL174C CDS1P38221 457 aa1.96□□□□□ -2.1
NIP100YPL174C STB5P38699 743 aa1.96□□□□□ -2.1
NIP100YPL174C BPL1P48445 690 aaPredicted RBP1.96□□□□□ -2.1
NIP100YPL174C PIP2P52960 996 aa1.96□□□□□ -2.1
NIP100YPL174C YML053CQ04978 212 aa1.96□□□□□ -2.1
NIP100YPL174C YOR378WQ08902 515 aa1.96□□□□□ -2.1
NIP100YPL174C PSF3Q12146 194 aa1.96□□□□□ -2.1
NIP100YPL174C CBP3P21560 335 aa1.96□□□□□ -2.1
NIP100YPL174C CWH43P25618 953 aa1.96□□□□□ -2.1
NIP100YPL174C SWC3P31376 625 aa1.96□□□□□ -2.1
NIP100YPL174C TFC4P33339 1025 aa1.96□□□□□ -2.1
NIP100YPL174C EAF5P39995 279 aa1.96□□□□□ -2.1
NIP100YPL174C MNT3P40549 630 aa1.96□□□□□ -2.1
NIP100YPL174C YIR016WP40572 265 aa1.96□□□□□ -2.1
NIP100YPL174C TAN1P53072 289 aaPredicted RBP1.96□□□□□ -2.1
NIP100YPL174C YNL058CP53947 316 aa1.96□□□□□ -2.1
NIP100YPL174C YNL034WP53963 612 aa1.96□□□□□ -2.1
NIP100YPL174C PHM6Q05637 104 aa1.96□□□□□ -2.1
NIP100YPL174C ECM38Q05902 660 aaPredicted RBP1.96□□□□□ -2.1
NIP100YPL174C PEX15Q08215 383 aa1.96□□□□□ -2.1
NIP100YPL174C NUR1Q12066 484 aa1.96□□□□□ -2.1
NIP100YPL174C YER175W-AQ8TGU4 54 aa1.96□□□□□ -2.1
NIP100YPL174C YAP1P19880 650 aaKnown RBP1.95□□□□□ -2.1
NIP100YPL174C ATP12P22135 325 aa1.95□□□□□ -2.1
NIP100YPL174C STL1P39932 569 aa1.95□□□□□ -2.1
NIP100YPL174C PEX14P53112 341 aa1.95□□□□□ -2.1
NIP100YPL174C YNL018CP53976 612 aa1.95□□□□□ -2.1
NIP100YPL174C CRC1Q12289 327 aa1.95□□□□□ -2.1
NIP100YPL174C AAC1P04710 309 aa1.95□□□□□ -2.1
NIP100YPL174C RPS7AP26786 190 aaKnown RBP1.95□□□□□ -2.1
NIP100YPL174C PET309P32522 965 aaPredicted RBP1.95□□□□□ -2.1
NIP100YPL174C GDA1P32621 518 aa1.95□□□□□ -2.1
NIP100YPL174C FLO5P38894 1075 aa1.95□□□□□ -2.1
NIP100YPL174C VFA1P40080 203 aa1.95□□□□□ -2.1
NIP100YPL174C RDL1Q12305 139 aaKnown RBP1.95□□□□□ -2.1
NIP100YPL174C URA3P03962 267 aa1.94□□□□□ -2.1
NIP100YPL174C PHO3P24031 467 aa1.94□□□□□ -2.1
NIP100YPL174C MSS51P32335 436 aa1.94□□□□□ -2.1
NIP100YPL174C YMR124WP39523 943 aaKnown RBP1.94□□□□□ -2.1
NIP100YPL174C UBP12P39538 1254 aa1.94□□□□□ -2.1
NIP100YPL174C MAM1P40065 302 aa1.94□□□□□ -2.1
NIP100YPL174C GPP2P40106 250 aaKnown RBP1.94□□□□□ -2.1
NIP100YPL174C PEF1P53238 335 aa1.94□□□□□ -2.1
NIP100YPL174C IDP3P53982 420 aaKnown RBP1.94□□□□□ -2.1
NIP100YPL174C SNU56Q03782 492 aaKnown RBP1.94□□□□□ -2.1
NIP100YPL174C PCL8Q08966 492 aa1.94□□□□□ -2.1
NIP100YPL174C ARG1P22768 420 aa1.94□□□□□ -2.1
NIP100YPL174C MBR1P23493 339 aa1.94□□□□□ -2.1
NIP100YPL174C MTC7P32633 139 aa1.94□□□□□ -2.1
NIP100YPL174C SPC97P38863 823 aa1.94□□□□□ -2.1
NIP100YPL174C RAD26P40352 1085 aa1.94□□□□□ -2.1
NIP100YPL174C CIR1P42940 261 aa1.94□□□□□ -2.1
NIP100YPL174C NMD5P46970 1048 aa1.94□□□□□ -2.1
NIP100YPL174C YNL144CP53907 740 aa1.94□□□□□ -2.1
NIP100YPL174C UBP16Q02863 499 aa1.94□□□□□ -2.1
NIP100YPL174C CYK3Q07533 885 aa1.94□□□□□ -2.1
NIP100YPL174C GCD7P32502 381 aaPredicted RBP1.93□□□□□ -2.1
NIP100YPL174C FUN12P39730 1002 aaKnown RBP1.93□□□□□ -2.1
NIP100YPL174C SAP1P39955 897 aaKnown RBP1.93□□□□□ -2.1
NIP100YPL174C NIT2P47016 307 aa1.93□□□□□ -2.1
NIP100YPL174C UBX6P47049 396 aa1.93□□□□□ -2.1
NIP100YPL174C SCW4P53334 386 aaKnown RBP1.93□□□□□ -2.1
NIP100YPL174C CRF1Q04930 467 aa1.93□□□□□ -2.1
NIP100YPL174C ARR3Q06598 404 aa1.93□□□□□ -2.1
NIP100YPL174C RTC1Q08281 1341 aa1.93□□□□□ -2.1
NIP100YPL174C SDH8P38345 138 aa1.93□□□□□ -2.1
NIP100YPL174C EXO1P39875 702 aa1.93□□□□□ -2.1
NIP100YPL174C SCS2P40075 244 aaKnown RBP1.93□□□□□ -2.1
NIP100YPL174C PCI8P40512 444 aa1.93□□□□□ -2.1
NIP100YPL174C IRC7P43623 340 aa1.93□□□□□ -2.1
NIP100YPL174C YJR120WP47157 116 aa1.93□□□□□ -2.1
NIP100YPL174C YDL183CP48569 320 aa1.93□□□□□ -2.1
NIP100YPL174C MNT2P53059 558 aa1.93□□□□□ -2.1
NIP100YPL174C RSC9Q03124 581 aa1.93□□□□□ -2.1
NIP100YPL174C VPS64Q03944 604 aa1.93□□□□□ -2.1
NIP100YPL174C HER1Q12276 1246 aa1.93□□□□□ -2.1
NIP100YPL174C FRE7Q12333 620 aa1.93□□□□□ -2.1
NIP100YPL174C CDC5P32562 705 aa1.92□□□□□ -2.1
NIP100YPL174C YBR071WP38243 211 aa1.92□□□□□ -2.1
NIP100YPL174C SSP120P39931 234 aaKnown RBP1.92□□□□□ -2.1
NIP100YPL174C IRC5P43610 853 aa1.92□□□□□ -2.1
NIP100YPL174C RPS15Q01855 142 aaKnown RBP1.92□□□□□ -2.1
NIP100YPL174C PLM2Q04383 521 aa1.92□□□□□ -2.1
NIP100YPL174C PLC1P32383 869 aa1.92□□□□□ -2.1
NIP100YPL174C RPT3P33298 428 aaKnown RBP1.92□□□□□ -2.1
NIP100YPL174C TGL1P34163 548 aa1.92□□□□□ -2.1
NIP100YPL174C YIL024CP40543 189 aa1.92□□□□□ -2.1
NIP100YPL174C FAF1P40546 346 aaPredicted RBP1.92□□□□□ -2.1
NIP100YPL174C SKP2P42843 763 aa1.92□□□□□ -2.1
NIP100YPL174C MRPL1Q04599 285 aa1.92□□□□□ -2.1
NIP100YPL174C PNO1Q99216 274 aaKnown RBP1.92□□□□□ -2.1
NIP100YPL174C LEU2P04173 364 aaPredicted RBP1.91□□□□□ -2.1
NIP100YPL174C GSY2P27472 705 aa1.91□□□□□ -2.1
NIP100YPL174C COQ3P27680 312 aa1.91□□□□□ -2.1
NIP100YPL174C RPF2P36160 344 aaKnown RBP1.91□□□□□ -2.1
NIP100YPL174C FTH1P38310 465 aa1.91□□□□□ -2.1
Retrieved 100 of 5,963 RNA–protein pairs in 9.9 ms