RNA–Protein interactions for RNA: YPL054W

LEE1, Transcript of Zinc-finger protein of unknown function, yeast

Gene LEE1, Length 906 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
LEE1	YPL054W	DID4	P36108	232 aa		3.34	□□□□□ -1.87
LEE1	YPL054W	TYS1	P36421	394 aa	Known RBP	3.34	□□□□□ -1.87
LEE1	YPL054W	FLO5	P38894	1075 aa		3.34	□□□□□ -1.87
LEE1	YPL054W	FPR4	Q06205	392 aa	Predicted RBP	3.34	□□□□□ -1.87
LEE1	YPL054W	CYK3	Q07533	885 aa		3.34	□□□□□ -1.87
LEE1	YPL054W	SNA4	Q07549	140 aa		3.34	□□□□□ -1.87
LEE1	YPL054W	YTM1	Q12024	460 aa	Predicted RBP	3.34	□□□□□ -1.87
LEE1	YPL054W	CET1	O13297	549 aa	Predicted RBP	3.33	□□□□□ -1.88
LEE1	YPL054W	YEL076C-A	P0CX16	216 aa		3.33	□□□□□ -1.88
LEE1	YPL054W	YLR464W	P0CX17	216 aa		3.33	□□□□□ -1.88
LEE1	YPL054W	AEP2	P22136	580 aa		3.33	□□□□□ -1.88
LEE1	YPL054W	YCP4	P25349	247 aa	Known RBP	3.33	□□□□□ -1.88
LEE1	YPL054W	FAT1	P38225	669 aa		3.33	□□□□□ -1.88
LEE1	YPL054W	YEL076C	P39971	216 aa		3.33	□□□□□ -1.88
LEE1	YPL054W	MNN11	P46985	422 aa	Known RBP	3.33	□□□□□ -1.88
LEE1	YPL054W	MDV1	P47025	714 aa		3.33	□□□□□ -1.88
LEE1	YPL054W	HLJ1	P48353	224 aa		3.33	□□□□□ -1.88
LEE1	YPL054W	GIS2	P53849	153 aa	Known RBP RIP-Chip data	3.33	□□□□□ -1.88	not detected
LEE1	YPL054W	MTD1	Q02046	320 aa	Known RBP	3.33	□□□□□ -1.88
LEE1	YPL054W	MTQ2	Q03920	221 aa	Predicted RBP	3.33	□□□□□ -1.88
LEE1	YPL054W	PNO1	Q99216	274 aa	Known RBP	3.33	□□□□□ -1.88
LEE1	YPL054W	PCK1	P10963	549 aa		3.32	□□□□□ -1.88
LEE1	YPL054W	AIM17	P23180	465 aa	Known RBP	3.32	□□□□□ -1.88
LEE1	YPL054W	MTG2	P38860	518 aa		3.32	□□□□□ -1.88
LEE1	YPL054W	RRP8	P38961	392 aa	Known RBP	3.32	□□□□□ -1.88
LEE1	YPL054W	YIR016W	P40572	265 aa		3.32	□□□□□ -1.88
LEE1	YPL054W	CIR1	P42940	261 aa		3.32	□□□□□ -1.88
LEE1	YPL054W	LYS20	P48570	428 aa	Known RBP	3.32	□□□□□ -1.88
LEE1	YPL054W	BOP3	P53958	396 aa		3.32	□□□□□ -1.88
LEE1	YPL054W	RPL15B	P54780	204 aa	Predicted RBP	3.32	□□□□□ -1.88
LEE1	YPL054W	THI73	Q07904	523 aa		3.32	□□□□□ -1.88
LEE1	YPL054W	ILS1	P09436	1072 aa	Known RBP	3.31	□□□□□ -1.88
LEE1	YPL054W	RPS21A	P0C0V8	87 aa	Known RBP	3.31	□□□□□ -1.88
LEE1	YPL054W	CDC5	P32562	705 aa		3.31	□□□□□ -1.88
LEE1	YPL054W	RMA1	P36001	430 aa	Known RBP	3.31	□□□□□ -1.88
LEE1	YPL054W	FTH1	P38310	465 aa		3.31	□□□□□ -1.88
LEE1	YPL054W	PEF1	P53238	335 aa		3.31	□□□□□ -1.88
LEE1	YPL054W	SNU56	Q03782	492 aa	Known RBP	3.31	□□□□□ -1.88
LEE1	YPL054W	RAD33	Q04231	177 aa		3.31	□□□□□ -1.88
LEE1	YPL054W	CBP3	P21560	335 aa		3.3	□□□□□ -1.88
LEE1	YPL054W	PPG1	P32838	368 aa		3.3	□□□□□ -1.88
LEE1	YPL054W	RPT3	P33298	428 aa	Known RBP	3.3	□□□□□ -1.88
LEE1	YPL054W	LAS21	P40367	830 aa		3.3	□□□□□ -1.88
LEE1	YPL054W	COG2	P53271	262 aa		3.3	□□□□□ -1.88
LEE1	YPL054W	VTC3	Q02725	835 aa		3.3	□□□□□ -1.88
LEE1	YPL054W	UTP14	Q04500	899 aa	Known RBP	3.3	□□□□□ -1.88
LEE1	YPL054W	ATX2	Q12067	313 aa		3.3	□□□□□ -1.88
LEE1	YPL054W	UBX3	Q12229	455 aa		3.3	□□□□□ -1.88
LEE1	YPL054W	ADR1	P07248	1323 aa		3.29	□□□□□ -1.88
LEE1	YPL054W	GDA1	P32621	518 aa		3.29	□□□□□ -1.88
LEE1	YPL054W	SDH8	P38345	138 aa		3.29	□□□□□ -1.88
LEE1	YPL054W	TOM71	P38825	639 aa	Known RBP	3.29	□□□□□ -1.88
LEE1	YPL054W	MNN1	P39106	762 aa		3.29	□□□□□ -1.88
LEE1	YPL054W	RAD26	P40352	1085 aa		3.29	□□□□□ -1.88
LEE1	YPL054W	ALG12	P53730	551 aa		3.29	□□□□□ -1.88
LEE1	YPL054W	GRS2	Q06817	618 aa		3.29	□□□□□ -1.88
LEE1	YPL054W	NDD1	Q08887	554 aa		3.29	□□□□□ -1.88
LEE1	YPL054W	PUF2	Q12221	1075 aa	Known RBP RIP-Chip data	3.29	□□□□□ -1.88	not detected
LEE1	YPL054W	YTA7	P40340	1379 aa		3.28	□□□□□ -1.88
LEE1	YPL054W	YPT1	P01123	206 aa	Known RBP	3.28	□□□□□ -1.88
LEE1	YPL054W	MAK32	P23060	363 aa		3.28	□□□□□ -1.88
LEE1	YPL054W	SCO2	P38072	301 aa		3.28	□□□□□ -1.88
LEE1	YPL054W	IMD2	P38697	523 aa	Known RBP	3.28	□□□□□ -1.88
LEE1	YPL054W	PMT3	P47190	753 aa		3.28	□□□□□ -1.88
LEE1	YPL054W	RNR4	P49723	345 aa	Known RBP	3.28	□□□□□ -1.88
LEE1	YPL054W	IMD3	P50095	523 aa	Known RBP	3.28	□□□□□ -1.88
LEE1	YPL054W	MDR1	P53258	950 aa		3.28	□□□□□ -1.88
LEE1	YPL054W	YNL092W	P53934	400 aa		3.28	□□□□□ -1.88
LEE1	YPL054W	DNM1	P54861	757 aa		3.28	□□□□□ -1.88
LEE1	YPL054W	CWH43	P25618	953 aa		3.27	□□□□□ -1.89
LEE1	YPL054W	HXT4	P32467	576 aa		3.27	□□□□□ -1.89
LEE1	YPL054W	MAM1	P40065	302 aa		3.27	□□□□□ -1.89
LEE1	YPL054W	CIN1	P40987	1014 aa		3.27	□□□□□ -1.89
LEE1	YPL054W	UME1	Q03010	460 aa		3.27	□□□□□ -1.89
LEE1	YPL054W	NGL1	Q08213	363 aa	Known RBP	3.27	□□□□□ -1.89
LEE1	YPL054W	YOR389W	Q08912	624 aa		3.27	□□□□□ -1.89
LEE1	YPL054W	NOP56	Q12460	504 aa	Known RBP RIP-Chip data	3.27	□□□□□ -1.89	not detected
LEE1	YPL054W	CHO2	P05374	869 aa	Known RBP	3.26	□□□□□ -1.89
LEE1	YPL054W	NOP1	P15646	327 aa	Known RBP	3.26	□□□□□ -1.89
LEE1	YPL054W	SRP68	P38687	599 aa	Known RBP	3.26	□□□□□ -1.89
LEE1	YPL054W	GND1	P38720	489 aa	Known RBP	3.26	□□□□□ -1.89
LEE1	YPL054W	NOP2	P40991	618 aa	Known RBP	3.26	□□□□□ -1.89
LEE1	YPL054W	AAT1	Q01802	451 aa		3.26	□□□□□ -1.89
LEE1	YPL054W	SCW10	Q04951	389 aa		3.26	□□□□□ -1.89
LEE1	YPL054W	DSE3	Q08729	430 aa		3.26	□□□□□ -1.89
LEE1	YPL054W	VPS5	Q92331	675 aa		3.26	□□□□□ -1.89
LEE1	YPL054W	PLC1	P32383	869 aa		3.25	□□□□□ -1.89
LEE1	YPL054W	RTT107	P38850	1070 aa		3.25	□□□□□ -1.89
LEE1	YPL054W	PEA2	P40091	420 aa		3.25	□□□□□ -1.89
LEE1	YPL054W	YIL152W	P40455	235 aa		3.25	□□□□□ -1.89
LEE1	YPL054W	RNH70	P53331	553 aa		3.25	□□□□□ -1.89
LEE1	YPL054W	GET3	Q12154	354 aa	Known RBP	3.25	□□□□□ -1.89
LEE1	YPL054W	NUP145	P49687	1317 aa		3.24	□□□□□ -1.89
LEE1	YPL054W	KES1	P35844	434 aa	Known RBP	3.24	□□□□□ -1.89
LEE1	YPL054W	YTH1	Q06102	208 aa	Predicted RBP	3.24	□□□□□ -1.89
LEE1	YPL054W	LYS21	Q12122	440 aa	Known RBP	3.24	□□□□□ -1.89
LEE1	YPL054W	RTC1	Q08281	1341 aa		3.23	□□□□□ -1.89
LEE1	YPL054W	GAL4	P04386	881 aa		3.23	□□□□□ -1.89
LEE1	YPL054W	PHO2	P07269	559 aa		3.23	□□□□□ -1.89
LEE1	YPL054W	RRP43	P25359	394 aa	Predicted RBP	3.23	□□□□□ -1.89

Retrieved 100 of 5,963 RNA–protein pairs in 55.5 ms