RNA–Protein interactions for RNA: YOR098C

NUP1, Transcript of FG-nucleoporin component of central core of the nuclear pore complex, yeast

Gene NUP1, Length 3,231 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
NUP1	YOR098C	RFA1	P22336	621 aa	Known RBP	5.74	□□□□□ -1.49
NUP1	YOR098C	SWC3	P31376	625 aa		5.74	□□□□□ -1.49
NUP1	YOR098C	MGM1	P32266	881 aa		5.74	□□□□□ -1.49
NUP1	YOR098C	YKR075C	P36155	307 aa		5.74	□□□□□ -1.49
NUP1	YOR098C	MSC7	P38694	644 aa		5.74	□□□□□ -1.49
NUP1	YOR098C	ALT1	P52893	592 aa		5.74	□□□□□ -1.49
NUP1	YOR098C	HDA1	P53973	706 aa		5.74	□□□□□ -1.49
NUP1	YOR098C	YPS7	Q06325	596 aa		5.74	□□□□□ -1.49
NUP1	YOR098C	YPR196W	Q06595	470 aa		5.74	□□□□□ -1.49
NUP1	YOR098C	YLL032C	Q07834	825 aa	Known RBP RIP-Chip data	5.74	□□□□□ -1.49	not detected
NUP1	YOR098C	YOR022C	Q12204	715 aa		5.74	□□□□□ -1.49
NUP1	YOR098C	GRX6	Q12438	231 aa		5.74	□□□□□ -1.49
NUP1	YOR098C	SIF2	P38262	535 aa		5.74	□□□□□ -1.49
NUP1	YOR098C	RFC1	P38630	861 aa	Known RBP	5.74	□□□□□ -1.49
NUP1	YOR098C	SSP120	P39931	234 aa	Known RBP	5.74	□□□□□ -1.49
NUP1	YOR098C	NAS2	P40555	220 aa		5.74	□□□□□ -1.49
NUP1	YOR098C	YNR068C	P53754	272 aa		5.74	□□□□□ -1.49
NUP1	YOR098C	BNI5	P53890	448 aa	Known RBP	5.74	□□□□□ -1.49
NUP1	YOR098C	HED1	Q03937	162 aa		5.74	□□□□□ -1.49
NUP1	YOR098C	AVO1	Q08236	1176 aa		5.74	□□□□□ -1.49
NUP1	YOR098C	YOR111W	Q99210	232 aa		5.74	□□□□□ -1.49
NUP1	YOR098C	MET5	P47169	1442 aa		5.73	□□□□□ -1.49
NUP1	YOR098C	CEP3	P40969	608 aa		5.73	□□□□□ -1.49
NUP1	YOR098C	UBP15	P50101	1230 aa		5.73	□□□□□ -1.49
NUP1	YOR098C	RSB1	Q08417	382 aa		5.73	□□□□□ -1.49
NUP1	YOR098C	THI21	Q08975	551 aa		5.73	□□□□□ -1.49
NUP1	YOR098C	APL4	Q12028	832 aa		5.73	□□□□□ -1.49
NUP1	YOR098C	COX17	Q12287	69 aa		5.73	□□□□□ -1.49
NUP1	YOR098C	TY3B-I	Q7LHG5	1498 aa	Known RBP	5.73	□□□□□ -1.49
NUP1	YOR098C	DAL80	P26343	269 aa		5.73	□□□□□ -1.49
NUP1	YOR098C	HFM1	P51979	1187 aa		5.73	□□□□□ -1.49
NUP1	YOR098C	ERV25	P54837	211 aa	Known RBP	5.73	□□□□□ -1.49
NUP1	YOR098C	YDL144C	Q07589	356 aa		5.73	□□□□□ -1.49
NUP1	YOR098C	ENT4	Q07872	247 aa		5.73	□□□□□ -1.49
NUP1	YOR098C	CAT8	P39113	1433 aa		5.73	□□□□□ -1.49
NUP1	YOR098C	PRC1	P00729	532 aa		5.72	□□□□□ -1.49
NUP1	YOR098C	CLB1	P24868	471 aa		5.72	□□□□□ -1.49
NUP1	YOR098C	EFT1	P32324	842 aa	Known RBP	5.72	□□□□□ -1.49
NUP1	YOR098C	SRO77	P38163	1010 aa		5.72	□□□□□ -1.49
NUP1	YOR098C	EFM4	P40516	257 aa		5.72	□□□□□ -1.49
NUP1	YOR098C	THI6	P41835	540 aa		5.72	□□□□□ -1.49
NUP1	YOR098C	BRE2	P43132	505 aa		5.72	□□□□□ -1.49
NUP1	YOR098C	ACS1	Q01574	713 aa		5.72	□□□□□ -1.49
NUP1	YOR098C	MLH2	Q07980	695 aa		5.72	□□□□□ -1.49
NUP1	YOR098C	RAD51	P25454	400 aa		5.72	□□□□□ -1.49
NUP1	YOR098C	IMG2	P25642	146 aa	Predicted RBP	5.72	□□□□□ -1.49
NUP1	YOR098C	CAP1	P28495	268 aa	Known RBP	5.72	□□□□□ -1.49
NUP1	YOR098C	AKL1	P38080	1108 aa	Known RBP	5.72	□□□□□ -1.49
NUP1	YOR098C	RPN3	P40016	523 aa	Known RBP	5.72	□□□□□ -1.49
NUP1	YOR098C	TOF1	P53840	1238 aa		5.72	□□□□□ -1.49
NUP1	YOR098C	FDC1	Q03034	503 aa		5.72	□□□□□ -1.49
NUP1	YOR098C	ECM22	Q05958	814 aa	Predicted RBP	5.72	□□□□□ -1.49
NUP1	YOR098C	PHO92	Q06390	306 aa		5.72	□□□□□ -1.49
NUP1	YOR098C	APE3	P37302	537 aa	Known RBP	5.72	□□□□□ -1.49
NUP1	YOR098C	YEL057C	P39983	233 aa		5.72	□□□□□ -1.49
NUP1	YOR098C	YIL161W	P40449	235 aa	Known RBP	5.72	□□□□□ -1.49
NUP1	YOR098C	ZIM17	P42844	174 aa		5.72	□□□□□ -1.49
NUP1	YOR098C	OGG1	P53397	376 aa	Predicted RBP	5.72	□□□□□ -1.49
NUP1	YOR098C	GPD1	Q00055	391 aa	Known RBP	5.72	□□□□□ -1.49
NUP1	YOR098C	GAD1	Q04792	585 aa		5.72	□□□□□ -1.49
NUP1	YOR098C	TY1B-JR2	P47100	1755 aa	Known RBP	5.72	□□□□□ -1.49
NUP1	YOR098C	TY1B-ER2	Q03619	1755 aa		5.72	□□□□□ -1.49
NUP1	YOR098C	TY1B-MR1	Q04214	1755 aa		5.72	□□□□□ -1.49
NUP1	YOR098C	TY1B-MR2	Q04670	1755 aa	Known RBP	5.72	□□□□□ -1.49
NUP1	YOR098C	TY1B-LR1	Q12088	1755 aa	Known RBP	5.72	□□□□□ -1.49
NUP1	YOR098C	TY1B-NL1	Q12112	1755 aa		5.72	□□□□□ -1.49
NUP1	YOR098C	TY1B-GR1	Q12141	1755 aa		5.72	□□□□□ -1.49
NUP1	YOR098C	TY1B-BL	Q12490	1755 aa		5.72	□□□□□ -1.49
NUP1	YOR098C	TUB2	P02557	457 aa	Known RBP	5.71	□□□□□ -1.49
NUP1	YOR098C	CDC24	P11433	854 aa	Predicted RBP	5.71	□□□□□ -1.49
NUP1	YOR098C	YCK1	P23291	538 aa		5.71	□□□□□ -1.49
NUP1	YOR098C	OCA4	P25366	362 aa		5.71	□□□□□ -1.49
NUP1	YOR098C	MRP20	P32387	263 aa		5.71	□□□□□ -1.49
NUP1	YOR098C	RMA1	P36001	430 aa	Known RBP	5.71	□□□□□ -1.49
NUP1	YOR098C	PRK1	P40494	810 aa		5.71	□□□□□ -1.49
NUP1	YOR098C	ARC1	P46672	376 aa	Known RBP	5.71	□□□□□ -1.49
NUP1	YOR098C	YJL045W	P47052	634 aa		5.71	□□□□□ -1.49
NUP1	YOR098C	IMA1	P53051	589 aa		5.71	□□□□□ -1.49
NUP1	YOR098C	MNP1	P53163	194 aa	Predicted RBP	5.71	□□□□□ -1.49
NUP1	YOR098C	ADA2	Q02336	434 aa		5.71	□□□□□ -1.49
NUP1	YOR098C	SKG3	Q06315	1026 aa		5.71	□□□□□ -1.49
NUP1	YOR098C	STP4	Q07351	490 aa		5.71	□□□□□ -1.49
NUP1	YOR098C	AAD4	Q07747	329 aa		5.71	□□□□□ -1.49
NUP1	YOR098C	BMS1	Q08965	1183 aa	Known RBP	5.71	□□□□□ -1.49
NUP1	YOR098C	SKS1	Q12505	502 aa		5.71	□□□□□ -1.49
NUP1	YOR098C	RPP0	P05317	312 aa	Known RBP	5.71	□□□□□ -1.5
NUP1	YOR098C	PEP3	P27801	918 aa		5.71	□□□□□ -1.5
NUP1	YOR098C	ARP2	P32381	391 aa	Known RBP	5.71	□□□□□ -1.5
NUP1	YOR098C	LYS9	P38999	446 aa		5.71	□□□□□ -1.5
NUP1	YOR098C	YMR210W	Q03649	449 aa		5.71	□□□□□ -1.5
NUP1	YOR098C	YPR172W	Q06608	200 aa		5.71	□□□□□ -1.5
NUP1	YOR098C	PUF3	Q07807	879 aa	Known RBP RIP-Chip data	5.71	□□□□□ -1.5	not detected
NUP1	YOR098C	MSP1	P28737	362 aa		5.7	□□□□□ -1.5
NUP1	YOR098C	GYP6	P32806	458 aa		5.7	□□□□□ -1.5
NUP1	YOR098C	POA1	P38218	177 aa		5.7	□□□□□ -1.5
NUP1	YOR098C	BUD16	P39988	312 aa		5.7	□□□□□ -1.5
NUP1	YOR098C	FET5	P43561	622 aa		5.7	□□□□□ -1.5
NUP1	YOR098C	SHE10	P53075	577 aa		5.7	□□□□□ -1.5
NUP1	YOR098C	NCE103	P53615	221 aa		5.7	□□□□□ -1.5
NUP1	YOR098C	NMD4	Q12129	218 aa		5.7	□□□□□ -1.5

Retrieved 100 of 5,963 RNA–protein pairs in 11.7 ms