RNA–Protein interactions for RNA: YOR048C

RAT1, Transcript of Nuclear 5' to 3' single-stranded RNA exonuclease, yeastyeast

Gene RAT1, Length 3,021 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RAT1YOR048C OSW2Q12202 724 aa5.46□□□□□ -1.54
RAT1YOR048C ERP3Q12403 225 aa5.46□□□□□ -1.54
RAT1YOR048C GAL10P04397 699 aa5.45□□□□□ -1.54
RAT1YOR048C MRPL32P25348 183 aa5.45□□□□□ -1.54
RAT1YOR048C ZIP1P31111 875 aa5.45□□□□□ -1.54
RAT1YOR048C UGP1P32861 499 aaKnown RBP5.45□□□□□ -1.54
RAT1YOR048C RIB7P33312 244 aa5.45□□□□□ -1.54
RAT1YOR048C MEF2P39677 819 aa5.45□□□□□ -1.54
RAT1YOR048C SAE2P46946 345 aa5.45□□□□□ -1.54
RAT1YOR048C POL31P46957 487 aa5.45□□□□□ -1.54
RAT1YOR048C MRK1P50873 501 aa5.45□□□□□ -1.54
RAT1YOR048C PUS2P53167 370 aa5.45□□□□□ -1.54
RAT1YOR048C TIM13P53299 105 aa5.45□□□□□ -1.54
RAT1YOR048C YML119WQ03208 357 aa5.45□□□□□ -1.54
RAT1YOR048C AI5_ALPHAQ9ZZX1 630 aa5.45□□□□□ -1.54
RAT1YOR048C PAB1P04147 577 aaKnown RBP RIP-Chip data5.45□□□□□ -1.54not detected
RAT1YOR048C ADE3P07245 946 aaKnown RBP5.45□□□□□ -1.54
RAT1YOR048C PHO81P17442 1178 aa5.45□□□□□ -1.54
RAT1YOR048C EXO70P19658 623 aa5.45□□□□□ -1.54
RAT1YOR048C TYR1P20049 452 aa5.45□□□□□ -1.54
RAT1YOR048C TKL1P23254 680 aaKnown RBP5.45□□□□□ -1.54
RAT1YOR048C YCL068CP25593 260 aa5.45□□□□□ -1.54
RAT1YOR048C HBS1P32769 611 aaKnown RBP5.45□□□□□ -1.54
RAT1YOR048C MRPL7P36519 292 aa5.45□□□□□ -1.54
RAT1YOR048C RIM2P38127 377 aa5.45□□□□□ -1.54
RAT1YOR048C HSL7P38274 827 aa5.45□□□□□ -1.54
RAT1YOR048C SLI15P38283 698 aa5.45□□□□□ -1.54
RAT1YOR048C NPP2P39997 493 aa5.45□□□□□ -1.54
RAT1YOR048C FMP32P43557 207 aa5.45□□□□□ -1.54
RAT1YOR048C CNN1P43618 361 aa5.45□□□□□ -1.54
RAT1YOR048C NUT1P53114 1132 aa5.45□□□□□ -1.54
RAT1YOR048C YDR179W-AQ03983 463 aa5.45□□□□□ -1.54
RAT1YOR048C THI7Q05998 598 aa5.45□□□□□ -1.54
RAT1YOR048C STE2D6VTK4 431 aa5.45□□□□□ -1.54
RAT1YOR048C ASP3-2P0CX77 362 aa5.45□□□□□ -1.54
RAT1YOR048C ASP3-3P0CX78 362 aa5.45□□□□□ -1.54
RAT1YOR048C ASP3-4P0CX79 362 aa5.45□□□□□ -1.54
RAT1YOR048C ASP3-1P0CZ17 362 aa5.45□□□□□ -1.54
RAT1YOR048C SPR1P32603 445 aa5.45□□□□□ -1.54
RAT1YOR048C GEM1P39722 662 aa5.45□□□□□ -1.54
RAT1YOR048C YGL036WP53185 909 aaPredicted RBP5.45□□□□□ -1.54
RAT1YOR048C PEX8P53248 589 aa5.45□□□□□ -1.54
RAT1YOR048C ULP1Q02724 621 aa5.45□□□□□ -1.54
RAT1YOR048C KAP95Q06142 861 aaKnown RBP5.45□□□□□ -1.54
RAT1YOR048C MCH5Q08777 521 aa5.45□□□□□ -1.54
RAT1YOR048C YAP1P19880 650 aaKnown RBP5.44□□□□□ -1.54
RAT1YOR048C SDH2P21801 266 aa5.44□□□□□ -1.54
RAT1YOR048C MSH2P25847 964 aa5.44□□□□□ -1.54
RAT1YOR048C GCD11P32481 527 aaKnown RBP5.44□□□□□ -1.54
RAT1YOR048C PEX6P33760 1030 aa5.44□□□□□ -1.54
RAT1YOR048C PTH2P34222 208 aa5.44□□□□□ -1.54
RAT1YOR048C TMA108P40462 946 aa5.44□□□□□ -1.54
RAT1YOR048C SCD6P45978 349 aaKnown RBP RIP-Chip data5.44□□□□□ -1.54 RIP-Chip
RAT1YOR048C GUF1P46943 645 aa5.44□□□□□ -1.54
RAT1YOR048C RPA14P50106 137 aa5.44□□□□□ -1.54
RAT1YOR048C AIF1P52923 378 aa5.44□□□□□ -1.54
RAT1YOR048C YGR117CP53270 476 aa5.44□□□□□ -1.54
RAT1YOR048C ARE2P53629 642 aaKnown RBP5.44□□□□□ -1.54
RAT1YOR048C REG1Q00816 1014 aa5.44□□□□□ -1.54
RAT1YOR048C GLO2Q05584 274 aa5.44□□□□□ -1.54
RAT1YOR048C VPS54Q12071 889 aa5.44□□□□□ -1.54
RAT1YOR048C MDM20Q12387 796 aaKnown RBP5.44□□□□□ -1.54
RAT1YOR048C YER152CP10356 443 aa5.44□□□□□ -1.54
RAT1YOR048C ABF1P14164 731 aa5.44□□□□□ -1.54
RAT1YOR048C TEC1P18412 486 aa5.44□□□□□ -1.54
RAT1YOR048C KAR9P32526 644 aa5.44□□□□□ -1.54
RAT1YOR048C FLR1P38124 548 aa5.44□□□□□ -1.54
RAT1YOR048C PCM1P38628 557 aaKnown RBP5.44□□□□□ -1.54
RAT1YOR048C CKB2P38930 258 aa5.44□□□□□ -1.54
RAT1YOR048C ATM1P40416 690 aa5.44□□□□□ -1.54
RAT1YOR048C PXR1P53335 271 aaPredicted RBP5.44□□□□□ -1.54
RAT1YOR048C YTP1P53584 459 aa5.44□□□□□ -1.54
RAT1YOR048C CEG1Q01159 459 aaPredicted RBP5.44□□□□□ -1.54
RAT1YOR048C YMR155WQ03795 547 aa5.44□□□□□ -1.54
RAT1YOR048C TIM9O74700 87 aa5.43□□□□□ -1.54
RAT1YOR048C COR1P07256 457 aa5.43□□□□□ -1.54
RAT1YOR048C HSP26P15992 214 aaKnown RBP RIP-Chip data5.43□□□□□ -1.54not detected
RAT1YOR048C VBA3P25594 458 aa5.43□□□□□ -1.54
RAT1YOR048C SRB2P34162 210 aa5.43□□□□□ -1.54
RAT1YOR048C VBA5P36172 582 aa5.43□□□□□ -1.54
RAT1YOR048C ABZ1P37254 787 aaPredicted RBP5.43□□□□□ -1.54
RAT1YOR048C BRL1P38770 471 aa5.43□□□□□ -1.54
RAT1YOR048C RRT5P43607 289 aa5.43□□□□□ -1.54
RAT1YOR048C RBL2P48606 106 aaKnown RBP5.43□□□□□ -1.54
RAT1YOR048C MNP1P53163 194 aaPredicted RBP5.43□□□□□ -1.54
RAT1YOR048C CRF1Q04930 467 aa5.43□□□□□ -1.54
RAT1YOR048C LRE1P25579 583 aaKnown RBP5.43□□□□□ -1.54
RAT1YOR048C LHS1P36016 881 aa5.43□□□□□ -1.54
RAT1YOR048C SWC5P38326 303 aa5.43□□□□□ -1.54
RAT1YOR048C SWD1P39706 426 aa5.43□□□□□ -1.54
RAT1YOR048C SAH1P39954 449 aaKnown RBP5.43□□□□□ -1.54
RAT1YOR048C SIP5P40210 489 aaKnown RBP5.43□□□□□ -1.54
RAT1YOR048C ARG2P40360 574 aa5.43□□□□□ -1.54
RAT1YOR048C UTP18P40362 594 aaPredicted RBP5.43□□□□□ -1.54
RAT1YOR048C CUL3P53202 744 aa5.43□□□□□ -1.54
RAT1YOR048C YGR283CP53336 341 aaPredicted RBP5.43□□□□□ -1.54
RAT1YOR048C CWC21Q03375 135 aaKnown RBP5.43□□□□□ -1.54
RAT1YOR048C KRE28Q04431 385 aa5.43□□□□□ -1.54
RAT1YOR048C VCX1Q99385 411 aa5.43□□□□□ -1.54
RAT1YOR048C DPB2P24482 689 aaPredicted RBP5.42□□□□□ -1.54
Retrieved 100 of 5,963 RNA–protein pairs in 19.9 ms