RNA–Protein interactions for RNA: YNL049C

SFB2, Transcript of Component of the Sec23p-Sfb2p heterodimer of the COPII vesicle coat, yeastyeast

Gene SFB2, Length 2,631 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SFB2YNL049C ADY3Q07732 790 aa1.94□□□□□ -2.1
SFB2YNL049C TPO1Q07824 586 aa1.94□□□□□ -2.1
SFB2YNL049C APE1P14904 514 aa1.94□□□□□ -2.1
SFB2YNL049C APA1P16550 321 aaKnown RBP1.94□□□□□ -2.1
SFB2YNL049C PTP2P29461 750 aa1.94□□□□□ -2.1
SFB2YNL049C STE14P32584 239 aa1.94□□□□□ -2.1
SFB2YNL049C CSE1P33307 960 aa1.94□□□□□ -2.1
SFB2YNL049C KDX1P36005 433 aa1.94□□□□□ -2.1
SFB2YNL049C KTR4P38131 464 aa1.94□□□□□ -2.1
SFB2YNL049C SAK1P38990 1142 aa1.94□□□□□ -2.1
SFB2YNL049C IRC8P47046 822 aa1.94□□□□□ -2.1
SFB2YNL049C SGM1P47166 707 aa1.94□□□□□ -2.1
SFB2YNL049C PSP2P50109 593 aaKnown RBP1.94□□□□□ -2.1
SFB2YNL049C PSP1P50896 841 aaKnown RBP1.94□□□□□ -2.1
SFB2YNL049C SLD3P53135 668 aa1.94□□□□□ -2.1
SFB2YNL049C MLC1P53141 149 aa1.94□□□□□ -2.1
SFB2YNL049C GTF1P53260 183 aaPredicted RBP1.94□□□□□ -2.1
SFB2YNL049C ORC3P54790 616 aa1.94□□□□□ -2.1
SFB2YNL049C RSM10Q03201 203 aa1.94□□□□□ -2.1
SFB2YNL049C ROT1Q03691 256 aa1.94□□□□□ -2.1
SFB2YNL049C UPC2Q12151 913 aa1.94□□□□□ -2.1
SFB2YNL049C YDL177CQ12257 170 aa1.94□□□□□ -2.1
SFB2YNL049C NOP56Q12460 504 aaKnown RBP RIP-Chip data1.94□□□□□ -2.1not detected
SFB2YNL049C GLN4P13188 809 aaKnown RBP1.93□□□□□ -2.1
SFB2YNL049C PRP4P20053 465 aaKnown RBP1.93□□□□□ -2.1
SFB2YNL049C HCA4P20448 770 aaKnown RBP1.93□□□□□ -2.1
SFB2YNL049C EFT1P32324 842 aaKnown RBP1.93□□□□□ -2.1
SFB2YNL049C TRZ1P36159 838 aaPredicted RBP1.93□□□□□ -2.1
SFB2YNL049C RXT2P38255 430 aa1.93□□□□□ -2.1
SFB2YNL049C MIP6P38760 659 aaKnown RBP1.93□□□□□ -2.1
SFB2YNL049C YHR078WP38799 552 aa1.93□□□□□ -2.1
SFB2YNL049C VPS45P38932 577 aa1.93□□□□□ -2.1
SFB2YNL049C BEM4P39011 633 aa1.93□□□□□ -2.1
SFB2YNL049C YGR021WP53212 290 aa1.93□□□□□ -2.1
SFB2YNL049C MUS81Q04149 632 aaPredicted RBP1.93□□□□□ -2.1
SFB2YNL049C TMA64Q04600 565 aaKnown RBP1.93□□□□□ -2.1
SFB2YNL049C YLR407WQ06070 228 aa1.93□□□□□ -2.1
SFB2YNL049C MLC2Q06580 163 aa1.93□□□□□ -2.1
SFB2YNL049C PEX15Q08215 383 aa1.93□□□□□ -2.1
SFB2YNL049C YPL277CQ08989 487 aa1.93□□□□□ -2.1
SFB2YNL049C NCB2Q92317 146 aa1.93□□□□□ -2.1
SFB2YNL049C MEX67Q99257 599 aaKnown RBP1.93□□□□□ -2.1
SFB2YNL049C HAP2P06774 265 aa1.93□□□□□ -2.1
SFB2YNL049C CDC26P14724 124 aa1.93□□□□□ -2.1
SFB2YNL049C PPZ1P26570 692 aa1.93□□□□□ -2.1
SFB2YNL049C YHL041WP38730 149 aa1.93□□□□□ -2.1
SFB2YNL049C YPT35P38815 214 aaKnown RBP1.93□□□□□ -2.1
SFB2YNL049C TVP23P38962 199 aa1.93□□□□□ -2.1
SFB2YNL049C MSS4P38994 779 aa1.93□□□□□ -2.1
SFB2YNL049C HIS6P40545 261 aa1.93□□□□□ -2.1
SFB2YNL049C VID28P40547 921 aa1.93□□□□□ -2.1
SFB2YNL049C URM1P40554 99 aaPredicted RBP1.93□□□□□ -2.1
SFB2YNL049C PFA3P42836 336 aa1.93□□□□□ -2.1
SFB2YNL049C MTR3P48240 250 aaPredicted RBP1.93□□□□□ -2.1
SFB2YNL049C NOP15P53927 220 aaPredicted RBP1.93□□□□□ -2.1
SFB2YNL049C SVL3Q03088 825 aaKnown RBP1.93□□□□□ -2.1
SFB2YNL049C VMS1Q04311 632 aaKnown RBP1.93□□□□□ -2.1
SFB2YNL049C RTT109Q07794 436 aa1.93□□□□□ -2.1
SFB2YNL049C CLP1Q08685 445 aaPredicted RBP1.93□□□□□ -2.1
SFB2YNL049C RRP6Q12149 733 aaKnown RBP1.93□□□□□ -2.1
SFB2YNL049C RRI2Q12348 645 aa1.93□□□□□ -2.1
SFB2YNL049C PCD1Q12524 340 aa1.93□□□□□ -2.1
SFB2YNL049C NUC1P08466 329 aa1.92□□□□□ -2.1
SFB2YNL049C CDC6P09119 513 aa1.92□□□□□ -2.1
SFB2YNL049C TUB3P09734 445 aaKnown RBP1.92□□□□□ -2.1
SFB2YNL049C YKL050CP35736 922 aa1.92□□□□□ -2.1
SFB2YNL049C MYO3P36006 1272 aa1.92□□□□□ -2.1
SFB2YNL049C MRPL40P36534 297 aa1.92□□□□□ -2.1
SFB2YNL049C EMP65P40085 556 aa1.92□□□□□ -2.1
SFB2YNL049C VHR1P40522 640 aa1.92□□□□□ -2.1
SFB2YNL049C MET12P46151 657 aa1.92□□□□□ -2.1
SFB2YNL049C RNR4P49723 345 aaKnown RBP1.92□□□□□ -2.1
SFB2YNL049C CEG1Q01159 459 aaPredicted RBP1.92□□□□□ -2.1
SFB2YNL049C SLU7Q02775 382 aaKnown RBP1.92□□□□□ -2.1
SFB2YNL049C SLD5Q03406 294 aa1.92□□□□□ -2.1
SFB2YNL049C CEF1Q03654 590 aaPredicted RBP1.92□□□□□ -2.1
SFB2YNL049C ECM7Q06200 448 aa1.92□□□□□ -2.1
SFB2YNL049C YPS7Q06325 596 aa1.92□□□□□ -2.1
SFB2YNL049C MRI1Q06489 411 aaKnown RBP1.92□□□□□ -2.1
SFB2YNL049C OMS1Q06668 471 aa1.92□□□□□ -2.1
SFB2YNL049C YDL121CQ07541 149 aa1.92□□□□□ -2.1
SFB2YNL049C MED7Q08278 222 aa1.92□□□□□ -2.1
SFB2YNL049C ATG11Q12527 1178 aa1.92□□□□□ -2.1
SFB2YNL049C HIP1P06775 603 aa1.92□□□□□ -2.1
SFB2YNL049C MSS18P08593 268 aa1.92□□□□□ -2.1
SFB2YNL049C PFK1P16861 987 aaKnown RBP1.92□□□□□ -2.1
SFB2YNL049C FPR1P20081 114 aaKnown RBP1.92□□□□□ -2.1
SFB2YNL049C SED4P25365 1065 aa1.92□□□□□ -2.1
SFB2YNL049C SEC21P32074 935 aaKnown RBP1.92□□□□□ -2.1
SFB2YNL049C HXT4P32467 576 aa1.92□□□□□ -2.1
SFB2YNL049C ATG19P35193 415 aa1.92□□□□□ -2.1
SFB2YNL049C SKI2P35207 1287 aaKnown RBP RIP-Chip data1.92□□□□□ -2.1not detected
SFB2YNL049C EAF5P39995 279 aa1.92□□□□□ -2.1
SFB2YNL049C ASI2P53895 289 aa1.92□□□□□ -2.1
SFB2YNL049C GPD1Q00055 391 aaKnown RBP1.92□□□□□ -2.1
SFB2YNL049C ADA2Q02336 434 aa1.92□□□□□ -2.1
SFB2YNL049C VPS72Q03388 795 aa1.92□□□□□ -2.1
SFB2YNL049C NSE5Q03718 556 aa1.92□□□□□ -2.1
SFB2YNL049C EMI2Q04409 500 aaKnown RBP1.92□□□□□ -2.1
SFB2YNL049C CUR1Q06469 252 aa1.92□□□□□ -2.1
Retrieved 100 of 5,963 RNA–protein pairs in 12 ms