RNA–Protein interactions for RNA: YMR107W

SPG4, Transcript of Protein required for high temperature survival during stationary phase, yeastyeast

Gene SPG4, Length 348 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SPG4YMR107W STE2D6VTK4 431 aa5.44□□□□□ -1.54
SPG4YMR107W CIT1P00890 479 aa5.44□□□□□ -1.54
SPG4YMR107W SSC1P0CS90 654 aaKnown RBP5.44□□□□□ -1.54
SPG4YMR107W MSS116P15424 664 aaKnown RBP5.44□□□□□ -1.54
SPG4YMR107W SPO16P17122 198 aa5.44□□□□□ -1.54
SPG4YMR107W FAR1P21268 830 aa5.44□□□□□ -1.54
SPG4YMR107W PTP2P29461 750 aa5.44□□□□□ -1.54
SPG4YMR107W SEC21P32074 935 aaKnown RBP5.44□□□□□ -1.54
SPG4YMR107W MUD1P32605 298 aaKnown RBP5.44□□□□□ -1.54
SPG4YMR107W GYP6P32806 458 aa5.44□□□□□ -1.54
SPG4YMR107W HSP78P33416 811 aa5.44□□□□□ -1.54
SPG4YMR107W MNN2P38069 597 aa5.44□□□□□ -1.54
SPG4YMR107W ETR1P38071 380 aa5.44□□□□□ -1.54
SPG4YMR107W SMF2P38778 549 aa5.44□□□□□ -1.54
SPG4YMR107W GAA1P39012 614 aa5.44□□□□□ -1.54
SPG4YMR107W GPB2P39717 880 aa5.44□□□□□ -1.54
SPG4YMR107W SSP120P39931 234 aaKnown RBP5.44□□□□□ -1.54
SPG4YMR107W ICP55P40051 511 aa5.44□□□□□ -1.54
SPG4YMR107W VHR1P40522 640 aa5.44□□□□□ -1.54
SPG4YMR107W AGP3P43548 558 aa5.44□□□□□ -1.54
SPG4YMR107W LAM5P43560 674 aa5.44□□□□□ -1.54
SPG4YMR107W GCD14P46959 383 aaPredicted RBP5.44□□□□□ -1.54
SPG4YMR107W RNR4P49723 345 aaKnown RBP5.44□□□□□ -1.54
SPG4YMR107W DSE4P53753 1117 aa5.44□□□□□ -1.54
SPG4YMR107W DSL1P53847 754 aa5.44□□□□□ -1.54
SPG4YMR107W ARK1P53974 638 aa5.44□□□□□ -1.54
SPG4YMR107W ORC3P54790 616 aa5.44□□□□□ -1.54
SPG4YMR107W UFO1Q04511 668 aa5.44□□□□□ -1.54
SPG4YMR107W COX20Q04935 205 aa5.44□□□□□ -1.54
SPG4YMR107W MET32Q12041 191 aa5.44□□□□□ -1.54
SPG4YMR107W GLE1Q12315 538 aa5.44□□□□□ -1.54
SPG4YMR107W MED1Q12321 566 aa5.44□□□□□ -1.54
SPG4YMR107W SPE4Q12455 300 aa5.44□□□□□ -1.54
SPG4YMR107W COBP00163 385 aa5.43□□□□□ -1.54
SPG4YMR107W BI4P03879 638 aa5.43□□□□□ -1.54
SPG4YMR107W RHO1P06780 209 aaKnown RBP5.43□□□□□ -1.54
SPG4YMR107W SNF4P12904 322 aa5.43□□□□□ -1.54
SPG4YMR107W PRP6P19735 899 aaPredicted RBP5.43□□□□□ -1.54
SPG4YMR107W DBP5P20449 482 aaKnown RBP5.43□□□□□ -1.54
SPG4YMR107W MRPL25P23369 157 aa5.43□□□□□ -1.54
SPG4YMR107W PHO3P24031 467 aa5.43□□□□□ -1.54
SPG4YMR107W CTR86P25355 563 aa5.43□□□□□ -1.54
SPG4YMR107W SUV3P32580 737 aa5.43□□□□□ -1.54
SPG4YMR107W YKL222CP35995 705 aa5.43□□□□□ -1.54
SPG4YMR107W PIM1P36775 1133 aa5.43□□□□□ -1.54
SPG4YMR107W YPK3P38070 525 aa5.43□□□□□ -1.54
SPG4YMR107W MSR1P38714 643 aa5.43□□□□□ -1.54
SPG4YMR107W RRP8P38961 392 aaKnown RBP5.43□□□□□ -1.54
SPG4YMR107W HXT6P39003 570 aaKnown RBP5.43□□□□□ -1.54
SPG4YMR107W HXT7P39004 570 aa5.43□□□□□ -1.54
SPG4YMR107W PIK1P39104 1066 aa5.43□□□□□ -1.54
SPG4YMR107W THI12P42883 340 aa5.43□□□□□ -1.54
SPG4YMR107W THI5P43534 340 aa5.43□□□□□ -1.54
SPG4YMR107W SWP82P43554 623 aa5.43□□□□□ -1.54
SPG4YMR107W IRC5P43610 853 aa5.43□□□□□ -1.54
SPG4YMR107W THI11P47183 340 aa5.43□□□□□ -1.54
SPG4YMR107W NUP84P52891 726 aa5.43□□□□□ -1.54
SPG4YMR107W PTA1Q01329 785 aaPredicted RBP5.43□□□□□ -1.54
SPG4YMR107W SEN54Q02825 467 aaPredicted RBP5.43□□□□□ -1.54
SPG4YMR107W NAN1Q02931 896 aaKnown RBP5.43□□□□□ -1.54
SPG4YMR107W MCP2Q06567 569 aa5.43□□□□□ -1.54
SPG4YMR107W YET3Q07451 203 aa5.43□□□□□ -1.54
SPG4YMR107W THI13Q07748 340 aa5.43□□□□□ -1.54
SPG4YMR107W RKM1Q08961 583 aaPredicted RBP5.43□□□□□ -1.54
SPG4YMR107W STB3Q12427 513 aa5.43□□□□□ -1.54
SPG4YMR107W AVL9Q12500 764 aa5.43□□□□□ -1.54
SPG4YMR107W BI3Q9ZZW7 517 aa5.43□□□□□ -1.54
SPG4YMR107W SSA1P10591 642 aaKnown RBP5.42□□□□□ -1.54
SPG4YMR107W GPA2P10823 449 aa5.42□□□□□ -1.54
SPG4YMR107W RAD18P10862 487 aa5.42□□□□□ -1.54
SPG4YMR107W PDC5P16467 563 aaKnown RBP5.42□□□□□ -1.54
SPG4YMR107W HSP60P19882 572 aaKnown RBP5.42□□□□□ -1.54
SPG4YMR107W KAR4P25583 335 aa5.42□□□□□ -1.54
SPG4YMR107W DAL1P32375 460 aa5.42□□□□□ -1.54
SPG4YMR107W HXT3P32466 567 aaKnown RBP5.42□□□□□ -1.54
SPG4YMR107W PEP12P32854 288 aa5.42□□□□□ -1.54
SPG4YMR107W DUR3P33413 735 aa5.42□□□□□ -1.54
SPG4YMR107W IXR1P33417 597 aa5.42□□□□□ -1.54
SPG4YMR107W PTK1P36002 662 aaPredicted RBP5.42□□□□□ -1.54
SPG4YMR107W TGL4P36165 910 aa5.42□□□□□ -1.54
SPG4YMR107W ATG14P38270 344 aa5.42□□□□□ -1.54
SPG4YMR107W YBR138CP38277 524 aa5.42□□□□□ -1.54
SPG4YMR107W FTR1P40088 404 aa5.42□□□□□ -1.54
SPG4YMR107W PHO86P46956 311 aa5.42□□□□□ -1.54
SPG4YMR107W ALY2P47029 1046 aa5.42□□□□□ -1.54
SPG4YMR107W SLU7Q02775 382 aaKnown RBP5.42□□□□□ -1.54
SPG4YMR107W ADI1Q03677 179 aa5.42□□□□□ -1.54
SPG4YMR107W TVP15Q03860 143 aa5.42□□□□□ -1.54
SPG4YMR107W ADE13Q05911 482 aaKnown RBP5.42□□□□□ -1.54
SPG4YMR107W SMD2Q06217 110 aaKnown RBP5.42□□□□□ -1.54
SPG4YMR107W REH1Q06709 432 aa5.42□□□□□ -1.54
SPG4YMR107W PUF3Q07807 879 aaKnown RBP RIP-Chip data5.42□□□□□ -1.54not detected
SPG4YMR107W YPL277CQ08989 487 aa5.42□□□□□ -1.54
SPG4YMR107W TMA46Q12000 345 aaKnown RBP5.42□□□□□ -1.54
SPG4YMR107W CFT2Q12102 859 aaPredicted RBP5.42□□□□□ -1.54
SPG4YMR107W GRX6Q12438 231 aa5.42□□□□□ -1.54
SPG4YMR107W VPS5Q92331 675 aa5.42□□□□□ -1.54
SPG4YMR107W TEF1P02994 458 aaKnown RBP5.41□□□□□ -1.54
SPG4YMR107W PDE2P06776 526 aa5.41□□□□□ -1.54
SPG4YMR107W NFT1P0CE68 1218 aa5.41□□□□□ -1.54
Retrieved 100 of 5,963 RNA–protein pairs in 72.5 ms