RNA–Protein interactions for RNA: YLR022C

SDO1, Transcript of Guanine nucleotide exchange factor (GEF) for Ria1p, yeastyeast

Gene SDO1, Length 753 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SDO1YLR022C SNA3P14359 133 aa3.81□□□□□ -1.8
SDO1YLR022C HCA4P20448 770 aaKnown RBP3.81□□□□□ -1.8
SDO1YLR022C MBR1P23493 339 aa3.81□□□□□ -1.8
SDO1YLR022C PUP3P25451 205 aaKnown RBP3.81□□□□□ -1.8
SDO1YLR022C PCL2P25693 308 aa3.81□□□□□ -1.8
SDO1YLR022C MVD1P32377 396 aaKnown RBP3.81□□□□□ -1.8
SDO1YLR022C GET2P40056 285 aa3.81□□□□□ -1.8
SDO1YLR022C NDC80P40460 691 aa3.81□□□□□ -1.8
SDO1YLR022C CCT7P42943 550 aaKnown RBP3.81□□□□□ -1.8
SDO1YLR022C YJR008WP47085 338 aa3.81□□□□□ -1.8
SDO1YLR022C SCS3P53012 380 aa3.81□□□□□ -1.8
SDO1YLR022C FPR4Q06205 392 aaPredicted RBP3.81□□□□□ -1.8
SDO1YLR022C NTG2Q08214 380 aa3.81□□□□□ -1.8
SDO1YLR022C RAD18P10862 487 aa3.8□□□□□ -1.8
SDO1YLR022C RNR1P21524 888 aaKnown RBP3.8□□□□□ -1.8
SDO1YLR022C DMC1P25453 334 aa3.8□□□□□ -1.8
SDO1YLR022C MCM4P30665 933 aaKnown RBP3.8□□□□□ -1.8
SDO1YLR022C SFB3P38810 929 aa3.8□□□□□ -1.8
SDO1YLR022C YJL206CP39529 758 aa3.8□□□□□ -1.8
SDO1YLR022C ALD5P40047 520 aaKnown RBP3.8□□□□□ -1.8
SDO1YLR022C FAF1P40546 346 aaPredicted RBP3.8□□□□□ -1.8
SDO1YLR022C UBC9P50623 157 aaPredicted RBP3.8□□□□□ -1.8
SDO1YLR022C PIP2P52960 996 aa3.8□□□□□ -1.8
SDO1YLR022C YGL039WP53183 348 aaKnown RBP3.8□□□□□ -1.8
SDO1YLR022C INM2Q05533 292 aa3.8□□□□□ -1.8
SDO1YLR022C RGC1Q06108 1083 aaKnown RBP3.8□□□□□ -1.8
SDO1YLR022C PIG1Q06216 648 aa3.8□□□□□ -1.8
SDO1YLR022C ATG33Q06485 197 aa3.8□□□□□ -1.8
SDO1YLR022C ISA1Q07821 250 aaPredicted RBP3.8□□□□□ -1.8
SDO1YLR022C HMG1P12683 1054 aa3.79□□□□□ -1.8
SDO1YLR022C PHO11P35842 467 aa3.79□□□□□ -1.8
SDO1YLR022C UBS1P38290 277 aa3.79□□□□□ -1.8
SDO1YLR022C PCM1P38628 557 aaKnown RBP3.79□□□□□ -1.8
SDO1YLR022C PHO12P38693 467 aa3.79□□□□□ -1.8
SDO1YLR022C STB5P38699 743 aa3.79□□□□□ -1.8
SDO1YLR022C TVP23P38962 199 aa3.79□□□□□ -1.8
SDO1YLR022C UBP12P39538 1254 aa3.79□□□□□ -1.8
SDO1YLR022C ARG2P40360 574 aa3.79□□□□□ -1.8
SDO1YLR022C MMR1Q06324 491 aa3.79□□□□□ -1.8
SDO1YLR022C GUD1Q07729 489 aa3.79□□□□□ -1.8
SDO1YLR022C KEL3Q08979 651 aaPredicted RBP3.79□□□□□ -1.8
SDO1YLR022C CLF1Q12309 687 aaPredicted RBP3.79□□□□□ -1.8
SDO1YLR022C NDJ1Q12366 352 aa3.79□□□□□ -1.8
SDO1YLR022C IRA1P18963 3092 aa3.78□□□□□ -1.8
SDO1YLR022C MET6P05694 767 aaKnown RBP3.78□□□□□ -1.8
SDO1YLR022C PEX1P24004 1043 aa3.78□□□□□ -1.8
SDO1YLR022C CCR4P31384 837 aaKnown RBP3.78□□□□□ -1.8
SDO1YLR022C SSZ1P38788 538 aaKnown RBP3.78□□□□□ -1.8
SDO1YLR022C CRP1P38845 465 aaKnown RBP3.78□□□□□ -1.8
SDO1YLR022C BDH2P39713 417 aa3.78□□□□□ -1.8
SDO1YLR022C DOT6P40059 670 aaKnown RBP3.78□□□□□ -1.8
SDO1YLR022C YIL166CP40445 542 aa3.78□□□□□ -1.8
SDO1YLR022C SET2P46995 733 aaKnown RBP3.78□□□□□ -1.8
SDO1YLR022C NOP9P47077 666 aaKnown RBP3.78□□□□□ -1.8
SDO1YLR022C YJR039WP47107 1121 aa3.78□□□□□ -1.8
SDO1YLR022C ATG4P53867 494 aa3.78□□□□□ -1.8
SDO1YLR022C LEE1Q02799 301 aaKnown RBP3.78□□□□□ -1.8
SDO1YLR022C PNG1Q02890 363 aa3.78□□□□□ -1.8
SDO1YLR022C YLR001CQ07895 862 aa3.78□□□□□ -1.8
SDO1YLR022C DUR1,2P32528 1835 aaKnown RBP3.78□□□□□ -1.8
SDO1YLR022C FMP27Q06179 2628 aa3.78□□□□□ -1.8
SDO1YLR022C SAM1P10659 382 aaKnown RBP3.77□□□□□ -1.81
SDO1YLR022C MAS2P11914 482 aa3.77□□□□□ -1.81
SDO1YLR022C MRP7P12687 371 aa3.77□□□□□ -1.81
SDO1YLR022C THR1P17423 357 aaKnown RBP3.77□□□□□ -1.81
SDO1YLR022C SFL1P20134 766 aa3.77□□□□□ -1.81
SDO1YLR022C ILV6P25605 309 aaKnown RBP3.77□□□□□ -1.81
SDO1YLR022C FUB1P25659 250 aa3.77□□□□□ -1.81
SDO1YLR022C SEC6P32844 805 aa3.77□□□□□ -1.81
SDO1YLR022C PPZ2P33329 710 aa3.77□□□□□ -1.81
SDO1YLR022C TFC4P33339 1025 aa3.77□□□□□ -1.81
SDO1YLR022C YKL097CP34245 136 aa3.77□□□□□ -1.81
SDO1YLR022C MNN4P36044 1178 aa3.77□□□□□ -1.81
SDO1YLR022C RRP14P36080 434 aaKnown RBP3.77□□□□□ -1.81
SDO1YLR022C APN2P38207 520 aa3.77□□□□□ -1.81
SDO1YLR022C YML053CQ04978 212 aa3.77□□□□□ -1.81
SDO1YLR022C THI22Q06490 572 aa3.77□□□□□ -1.81
SDO1YLR022C MLH3Q12083 715 aa3.77□□□□□ -1.81
SDO1YLR022C DCS2Q12123 353 aa3.77□□□□□ -1.81
SDO1YLR022C ERP3Q12403 225 aa3.77□□□□□ -1.81
SDO1YLR022C ZRT2Q12436 422 aa3.77□□□□□ -1.81
SDO1YLR022C ADY2P25613 283 aa3.76□□□□□ -1.81
SDO1YLR022C EMP70P32802 667 aa3.76□□□□□ -1.81
SDO1YLR022C SHP1P34223 423 aa3.76□□□□□ -1.81
SDO1YLR022C GLG1P36143 616 aa3.76□□□□□ -1.81
SDO1YLR022C BIT2P38346 545 aa3.76□□□□□ -1.81
SDO1YLR022C MOB1P40484 314 aa3.76□□□□□ -1.81
SDO1YLR022C OPT1P40897 799 aa3.76□□□□□ -1.81
SDO1YLR022C CTR1P49573 406 aa3.76□□□□□ -1.81
SDO1YLR022C AIM14P53109 570 aa3.76□□□□□ -1.81
SDO1YLR022C SOL4P53315 255 aa3.76□□□□□ -1.81
SDO1YLR022C PDS5Q04264 1277 aa3.76□□□□□ -1.81
SDO1YLR022C YMR321CQ04898 105 aa3.76□□□□□ -1.81
SDO1YLR022C RRI2Q12348 645 aa3.76□□□□□ -1.81
SDO1YLR022C ECM3Q99252 613 aa3.76□□□□□ -1.81
SDO1YLR022C TUB1P09733 447 aaKnown RBP3.75□□□□□ -1.81
SDO1YLR022C MDM10P18409 493 aa3.75□□□□□ -1.81
SDO1YLR022C PRE8P23639 250 aa3.75□□□□□ -1.81
SDO1YLR022C PDR3P33200 976 aa3.75□□□□□ -1.81
SDO1YLR022C FLO10P36170 1169 aa3.75□□□□□ -1.81
Retrieved 100 of 5,963 RNA–protein pairs in 13.3 ms