RNA–Protein interactions for RNA: YLL035W

GRC3, Transcript of Polynucleotide kinase present on rDNA, yeast

Gene GRC3, Length 1,899 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
GRC3	YLL035W	YBL010C	P32788	280 aa		4.54	□□□□□ -1.68
GRC3	YLL035W	RPT5	P33297	434 aa	Known RBP	4.54	□□□□□ -1.68
GRC3	YLL035W	LRG1	P35688	1017 aa		4.54	□□□□□ -1.68
GRC3	YLL035W	CTM1	P38818	585 aa		4.54	□□□□□ -1.68
GRC3	YLL035W	MIG2	P53035	382 aa		4.54	□□□□□ -1.68
GRC3	YLL035W	MAL11	P53048	616 aa		4.54	□□□□□ -1.68
GRC3	YLL035W	VAC7	P53950	1165 aa		4.54	□□□□□ -1.68
GRC3	YLL035W	ADE16	P54113	591 aa	Known RBP	4.54	□□□□□ -1.68
GRC3	YLL035W	FOX2	Q02207	900 aa	Known RBP	4.54	□□□□□ -1.68
GRC3	YLL035W	YDR239C	Q03780	787 aa		4.54	□□□□□ -1.68
GRC3	YLL035W	BUD22	Q04347	519 aa	Known RBP	4.54	□□□□□ -1.68
GRC3	YLL035W	ERF2	Q06551	359 aa		4.54	□□□□□ -1.68
GRC3	YLL035W	HIM1	Q06674	414 aa		4.54	□□□□□ -1.68
GRC3	YLL035W	YLR001C	Q07895	862 aa		4.54	□□□□□ -1.68
GRC3	YLL035W	MLH2	Q07980	695 aa		4.54	□□□□□ -1.68
GRC3	YLL035W	RAP1	P11938	827 aa		4.54	□□□□□ -1.68
GRC3	YLL035W	GFA1	P14742	717 aa	Known RBP	4.54	□□□□□ -1.68
GRC3	YLL035W	MCM3	P24279	971 aa	Known RBP	4.54	□□□□□ -1.68
GRC3	YLL035W	RPS5	P26783	225 aa	Known RBP	4.54	□□□□□ -1.68
GRC3	YLL035W	HXT1	P32465	570 aa		4.54	□□□□□ -1.68
GRC3	YLL035W	FRD1	P32614	470 aa	Known RBP	4.54	□□□□□ -1.68
GRC3	YLL035W	CLG1	P35190	452 aa		4.54	□□□□□ -1.68
GRC3	YLL035W	YET1	P35723	206 aa		4.54	□□□□□ -1.68
GRC3	YLL035W	MYO3	P36006	1272 aa		4.54	□□□□□ -1.68
GRC3	YLL035W	RPS26A	P39938	119 aa	Known RBP	4.54	□□□□□ -1.68
GRC3	YLL035W	RPS26B	P39939	119 aa	Known RBP	4.54	□□□□□ -1.68
GRC3	YLL035W	RTT105	P40063	208 aa		4.54	□□□□□ -1.68
GRC3	YLL035W	YNL320W	P42840	284 aa		4.54	□□□□□ -1.68
GRC3	YLL035W	BIR1	P47134	954 aa		4.54	□□□□□ -1.68
GRC3	YLL035W	VMA10	P48836	114 aa	Known RBP	4.54	□□□□□ -1.68
GRC3	YLL035W	ARC35	P53731	342 aa	Known RBP	4.54	□□□□□ -1.68
GRC3	YLL035W	IMP4	P53941	290 aa	Known RBP	4.54	□□□□□ -1.68
GRC3	YLL035W	RRP17	Q04031	235 aa	Predicted RBP	4.54	□□□□□ -1.68
GRC3	YLL035W	SOV1	Q04748	898 aa		4.54	□□□□□ -1.68
GRC3	YLL035W	IRC3	Q06683	689 aa		4.54	□□□□□ -1.68
GRC3	YLL035W	TMA46	Q12000	345 aa	Known RBP	4.54	□□□□□ -1.68
GRC3	YLL035W	TRM11	Q12463	433 aa		4.54	□□□□□ -1.68
GRC3	YLL035W	YOR111W	Q99210	232 aa		4.54	□□□□□ -1.68
GRC3	YLL035W	YLR278C	Q05854	1341 aa		4.53	□□□□□ -1.68
GRC3	YLL035W	NUP188	P52593	1655 aa	Known RBP	4.53	□□□□□ -1.68
GRC3	YLL035W	CHO2	P05374	869 aa	Known RBP	4.53	□□□□□ -1.68
GRC3	YLL035W	RPL8A	P17076	256 aa	Known RBP	4.53	□□□□□ -1.68
GRC3	YLL035W	CAD1	P24813	409 aa	Known RBP	4.53	□□□□□ -1.68
GRC3	YLL035W	TEF4	P36008	412 aa	Known RBP	4.53	□□□□□ -1.68
GRC3	YLL035W	BAP2	P38084	609 aa		4.53	□□□□□ -1.68
GRC3	YLL035W	RDH54	P38086	958 aa		4.53	□□□□□ -1.68
GRC3	YLL035W	MAK5	P38112	773 aa	Predicted RBP	4.53	□□□□□ -1.68
GRC3	YLL035W	ECM31	P38122	312 aa		4.53	□□□□□ -1.68
GRC3	YLL035W	RFS1	P38234	210 aa	Known RBP	4.53	□□□□□ -1.68
GRC3	YLL035W	TDP1	P38319	544 aa		4.53	□□□□□ -1.68
GRC3	YLL035W	BFR1	P38934	470 aa	Known RBP RIP-Chip data	4.53	□□□□□ -1.68	not detected
GRC3	YLL035W	GDH3	P39708	457 aa		4.53	□□□□□ -1.68
GRC3	YLL035W	YTA12	P40341	825 aa		4.53	□□□□□ -1.68
GRC3	YLL035W	NIT1	P40447	199 aa		4.53	□□□□□ -1.68
GRC3	YLL035W	LYS4	P49367	693 aa	Predicted RBP	4.53	□□□□□ -1.68
GRC3	YLL035W	RMR1	P53060	241 aa		4.53	□□□□□ -1.68
GRC3	YLL035W	DSD1	P53095	428 aa		4.53	□□□□□ -1.68
GRC3	YLL035W	MRPL50	P53724	139 aa		4.53	□□□□□ -1.68
GRC3	YLL035W	NAF1	P53919	492 aa	Known RBP	4.53	□□□□□ -1.68
GRC3	YLL035W	UBP2	Q01476	1272 aa		4.53	□□□□□ -1.68
GRC3	YLL035W	CWC21	Q03375	135 aa	Known RBP	4.53	□□□□□ -1.68
GRC3	YLL035W	ACL4	Q03771	387 aa		4.53	□□□□□ -1.68
GRC3	YLL035W	URC2	Q04411	772 aa		4.53	□□□□□ -1.68
GRC3	YLL035W	YLR407W	Q06070	228 aa		4.53	□□□□□ -1.68
GRC3	YLL035W	EAF1	Q06337	982 aa		4.53	□□□□□ -1.68
GRC3	YLL035W	TRE1	Q08919	783 aa		4.53	□□□□□ -1.68
GRC3	YLL035W	AFT2	Q08957	416 aa		4.53	□□□□□ -1.68
GRC3	YLL035W	HUA2	Q12134	243 aa		4.53	□□□□□ -1.68
GRC3	YLL035W	NSI1	Q12457	570 aa		4.53	□□□□□ -1.68
GRC3	YLL035W	BCK1	Q01389	1478 aa		4.53	□□□□□ -1.68
GRC3	YLL035W	ATP6	P00854	259 aa		4.52	□□□□□ -1.69
GRC3	YLL035W	MF(ALPHA)1	P01149	165 aa		4.52	□□□□□ -1.69
GRC3	YLL035W	MATALPHA2	P0CY08	210 aa		4.52	□□□□□ -1.69
GRC3	YLL035W	HMLALPHA2	P0CY09	210 aa		4.52	□□□□□ -1.69
GRC3	YLL035W	HMG2	P12684	1045 aa		4.52	□□□□□ -1.69
GRC3	YLL035W	RVS161	P25343	265 aa	Known RBP	4.52	□□□□□ -1.69
GRC3	YLL035W	KRE2	P27809	442 aa		4.52	□□□□□ -1.69
GRC3	YLL035W	PRR1	P28708	518 aa		4.52	□□□□□ -1.69
GRC3	YLL035W	YKL050C	P35736	922 aa		4.52	□□□□□ -1.69
GRC3	YLL035W	RFC3	P38629	340 aa		4.52	□□□□□ -1.69
GRC3	YLL035W	DSS1	P39112	969 aa		4.52	□□□□□ -1.69
GRC3	YLL035W	EDC3	P39998	551 aa	Known RBP	4.52	□□□□□ -1.69
GRC3	YLL035W	ALD5	P40047	520 aa	Known RBP	4.52	□□□□□ -1.69
GRC3	YLL035W	YIL077C	P40508	320 aa		4.52	□□□□□ -1.69
GRC3	YLL035W	GPP1	P41277	250 aa	Known RBP	4.52	□□□□□ -1.69
GRC3	YLL035W	EMW1	P42842	904 aa	Known RBP	4.52	□□□□□ -1.69
GRC3	YLL035W	ELP2	P42935	788 aa		4.52	□□□□□ -1.69
GRC3	YLL035W	TIM54	P47045	478 aa		4.52	□□□□□ -1.69
GRC3	YLL035W	YKE2	P52553	114 aa		4.52	□□□□□ -1.69
GRC3	YLL035W	YGR016W	P53209	190 aa		4.52	□□□□□ -1.69
GRC3	YLL035W	UTP8	P53276	713 aa	Known RBP	4.52	□□□□□ -1.69
GRC3	YLL035W	GOR1	P53839	350 aa		4.52	□□□□□ -1.69
GRC3	YLL035W	TGL2	P54857	326 aa		4.52	□□□□□ -1.69
GRC3	YLL035W	RPT6	Q01939	405 aa	Known RBP	4.52	□□□□□ -1.69
GRC3	YLL035W	NSE5	Q03718	556 aa		4.52	□□□□□ -1.69
GRC3	YLL035W	RPN9	Q04062	393 aa	Known RBP	4.52	□□□□□ -1.69
GRC3	YLL035W	SMP3	Q04174	516 aa		4.52	□□□□□ -1.69
GRC3	YLL035W	YMR114C	Q04471	368 aa	Known RBP	4.52	□□□□□ -1.69
GRC3	YLL035W	TOS4	Q06266	489 aa		4.52	□□□□□ -1.69
GRC3	YLL035W	PUN1	Q06991	263 aa		4.52	□□□□□ -1.69

Retrieved 100 of 5,963 RNA–protein pairs in 30.4 ms