RNA–Protein interactions for RNA: YKR101W

SIR1, Transcript of Protein involved in silencing at mating-type loci HML and HMR, yeastyeast

Gene SIR1, Length 1,965 nt, Biotype protein coding.

RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SIR1YKR101W DHR2P36009 735 aaPredicted RBP5.13□□□□□ -1.59
SIR1YKR101W MRPL36P36531 177 aa5.13□□□□□ -1.59
SIR1YKR101W PSD1P39006 500 aa5.13□□□□□ -1.59
SIR1YKR101W FAF1P40546 346 aaPredicted RBP5.13□□□□□ -1.59
SIR1YKR101W SIP4P46954 829 aa5.13□□□□□ -1.59
SIR1YKR101W MUP1P50276 574 aa5.13□□□□□ -1.59
SIR1YKR101W ARE2P53629 642 aaKnown RBP5.13□□□□□ -1.59
SIR1YKR101W MRP7P12687 371 aa5.12□□□□□ -1.59
SIR1YKR101W VPS33P20795 691 aa5.12□□□□□ -1.59
SIR1YKR101W ARB1P40024 610 aaKnown RBP5.12□□□□□ -1.59
SIR1YKR101W YIR042CP40586 236 aa5.12□□□□□ -1.59
SIR1YKR101W COG1P53079 417 aa5.12□□□□□ -1.59
SIR1YKR101W PUS1Q12211 544 aaKnown RBP5.12□□□□□ -1.59
SIR1YKR101W PFK2P16862 959 aaKnown RBP RIP-Chip data5.11□□□□□ -1.59not detected
SIR1YKR101W RAD16P31244 790 aa5.11□□□□□ -1.59
SIR1YKR101W LIP5P32875 414 aa5.11□□□□□ -1.59
SIR1YKR101W CNS1P33313 385 aa5.11□□□□□ -1.59
SIR1YKR101W SGM1P47166 707 aa5.11□□□□□ -1.59
SIR1YKR101W YGR054WP53235 642 aaKnown RBP5.11□□□□□ -1.59
SIR1YKR101W ATG21Q02887 496 aa5.11□□□□□ -1.59
SIR1YKR101W TAF11Q04226 346 aa5.11□□□□□ -1.59
SIR1YKR101W HOF1Q05080 669 aa5.11□□□□□ -1.59
SIR1YKR101W CHS5Q12114 671 aaKnown RBP5.11□□□□□ -1.59
SIR1YKR101W SNU66Q12420 587 aaPredicted RBP5.11□□□□□ -1.59
SIR1YKR101W TPK1P06244 397 aa5.11□□□□□ -1.59
SIR1YKR101W CMK1P27466 446 aaKnown RBP5.11□□□□□ -1.59
SIR1YKR101W MVD1P32377 396 aaKnown RBP5.11□□□□□ -1.59
SIR1YKR101W TPA1P40032 644 aaKnown RBP5.11□□□□□ -1.59
SIR1YKR101W VTC2P43585 828 aa5.11□□□□□ -1.59
SIR1YKR101W STP3Q05937 343 aa5.11□□□□□ -1.59
SIR1YKR101W VAM6Q07468 1049 aa5.11□□□□□ -1.59
SIR1YKR101W ENB1Q08299 606 aa5.11□□□□□ -1.59
SIR1YKR101W SSN2P38931 1420 aa5.11□□□□□ -1.59
SIR1YKR101W TRP4P07285 380 aaPredicted RBP5.1□□□□□ -1.59
SIR1YKR101W YJL193WP39542 402 aa5.1□□□□□ -1.59
SIR1YKR101W IRC6P43615 237 aa5.1□□□□□ -1.59
SIR1YKR101W AMA1P50082 593 aa5.1□□□□□ -1.59
SIR1YKR101W TEL2P53038 688 aa5.1□□□□□ -1.59
SIR1YKR101W VIP1Q06685 1146 aaKnown RBP5.1□□□□□ -1.59
SIR1YKR101W SOD2P00447 233 aa5.09□□□□□ -1.59
SIR1YKR101W TY2A-LR1P0C2J4 438 aa5.09□□□□□ -1.59
SIR1YKR101W TY2A-FP0CX61 438 aa5.09□□□□□ -1.59
SIR1YKR101W TY2A-GR2P0CX62 438 aa5.09□□□□□ -1.59
SIR1YKR101W RPL19AP0CX82 189 aaKnown RBP5.09□□□□□ -1.59
SIR1YKR101W RPL19BP0CX83 189 aaPredicted RBP5.09□□□□□ -1.59
SIR1YKR101W PET122P10355 254 aa5.09□□□□□ -1.59
SIR1YKR101W TY2A-CP25383 438 aa5.09□□□□□ -1.59
SIR1YKR101W MAC1P35192 417 aa5.09□□□□□ -1.59
SIR1YKR101W NUP120P35729 1037 aa5.09□□□□□ -1.59
SIR1YKR101W AIM3P38266 947 aaKnown RBP5.09□□□□□ -1.59
SIR1YKR101W YBR225WP38321 900 aa5.09□□□□□ -1.59
SIR1YKR101W INP52P50942 1183 aa5.09□□□□□ -1.59
SIR1YKR101W UBC11P52492 156 aa5.09□□□□□ -1.59
SIR1YKR101W PAN2P53010 1115 aaPredicted RBP5.09□□□□□ -1.59
SIR1YKR101W CSL4P53859 292 aaPredicted RBP5.09□□□□□ -1.59
SIR1YKR101W TY2A-DR2Q03483 438 aa5.09□□□□□ -1.59
SIR1YKR101W TMA10Q06177 86 aa5.09□□□□□ -1.59
SIR1YKR101W IRC13Q08630 104 aa5.09□□□□□ -1.59
SIR1YKR101W TY2A-BQ12260 438 aa5.09□□□□□ -1.59
SIR1YKR101W TY2A-OR2Q12293 438 aa5.09□□□□□ -1.59
SIR1YKR101W TY2A-DR1Q12392 438 aa5.09□□□□□ -1.59
SIR1YKR101W TY2A-OR1Q12439 438 aa5.09□□□□□ -1.59
SIR1YKR101W TY2A-DR3Q99303 438 aa5.09□□□□□ -1.59
SIR1YKR101W OLE1P21147 510 aaKnown RBP5.09□□□□□ -1.6
SIR1YKR101W MRP20P32387 263 aa5.09□□□□□ -1.6
SIR1YKR101W NPR2P39923 615 aa5.09□□□□□ -1.6
SIR1YKR101W YEL025CP39991 1188 aa5.09□□□□□ -1.6
SIR1YKR101W PIG2P40187 538 aa5.09□□□□□ -1.6
SIR1YKR101W KHA1P40309 873 aa5.09□□□□□ -1.6
SIR1YKR101W RMD8P43620 662 aa5.09□□□□□ -1.6
SIR1YKR101W MPS3P47069 682 aa5.09□□□□□ -1.6
SIR1YKR101W BSC5P53755 489 aa5.09□□□□□ -1.6
SIR1YKR101W IZH3Q07959 543 aa5.09□□□□□ -1.6
SIR1YKR101W ECM5Q03214 1411 aa5.08□□□□□ -1.6
SIR1YKR101W CTT1P06115 562 aa5.08□□□□□ -1.6
SIR1YKR101W RPB2P08518 1224 aaKnown RBP5.08□□□□□ -1.6
SIR1YKR101W SEC12P11655 471 aa5.08□□□□□ -1.6
SIR1YKR101W PRE10P21242 288 aaKnown RBP RIP-Chip data5.08□□□□□ -1.6not detected
SIR1YKR101W PRP28P23394 588 aa5.08□□□□□ -1.6
SIR1YKR101W DSS4P32601 143 aa5.08□□□□□ -1.6
SIR1YKR101W GEX2P36173 615 aa5.08□□□□□ -1.6
SIR1YKR101W MRPL7P36519 292 aa5.08□□□□□ -1.6
SIR1YKR101W ELO3P40319 345 aa5.08□□□□□ -1.6
SIR1YKR101W YJR061WP40355 935 aa5.08□□□□□ -1.6
SIR1YKR101W ZAP1P47043 880 aa5.08□□□□□ -1.6
SIR1YKR101W MRPL19P53875 158 aa5.08□□□□□ -1.6
SIR1YKR101W YSA1Q01976 231 aa5.08□□□□□ -1.6
SIR1YKR101W MLH3Q12083 715 aa5.08□□□□□ -1.6
SIR1YKR101W TAH18Q12181 623 aa5.08□□□□□ -1.6
SIR1YKR101W ZRT2Q12436 422 aa5.08□□□□□ -1.6
SIR1YKR101W HIR3P47171 1648 aa5.08□□□□□ -1.6
SIR1YKR101W SUI3P09064 285 aaKnown RBP5.07□□□□□ -1.6
SIR1YKR101W CAF20P12962 161 aaKnown RBP5.07□□□□□ -1.6
SIR1YKR101W SGF29P25554 259 aa5.07□□□□□ -1.6
SIR1YKR101W REG1Q00816 1014 aa5.07□□□□□ -1.6
SIR1YKR101W DLT1Q04216 342 aa5.07□□□□□ -1.6
SIR1YKR101W MFB1Q04922 465 aa5.07□□□□□ -1.6
SIR1YKR101W CDA2Q06703 312 aa5.07□□□□□ -1.6
SIR1YKR101W HSH49Q99181 213 aaPredicted RBP5.07□□□□□ -1.6
SIR1YKR101W TUB2P02557 457 aaKnown RBP5.07□□□□□ -1.6
Retrieved 100 of 5,963 RNA–protein pairs in 66.8 ms