RNA–Protein interactions for RNA: YKL124W

SSH4, Transcript of Specificity factor required for Rsp5p-dependent ubiquitination, yeastyeast

Gene SSH4, Length 1,740 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SSH4YKL124W SMC1P32908 1225 aa4.63□□□□□ -1.67
SSH4YKL124W SGE1P33335 543 aa4.63□□□□□ -1.67
SSH4YKL124W MRPL10P36520 322 aa4.63□□□□□ -1.67
SSH4YKL124W ARL1P38116 183 aaKnown RBP4.63□□□□□ -1.67
SSH4YKL124W YBR053CP38235 358 aa4.63□□□□□ -1.67
SSH4YKL124W YEL075CP39972 122 aa4.63□□□□□ -1.67
SSH4YKL124W AIM20P40451 204 aa4.63□□□□□ -1.67
SSH4YKL124W TMA108P40462 946 aa4.63□□□□□ -1.67
SSH4YKL124W PRK1P40494 810 aa4.63□□□□□ -1.67
SSH4YKL124W RMD8P43620 662 aa4.63□□□□□ -1.67
SSH4YKL124W VTC4P47075 721 aa4.63□□□□□ -1.67
SSH4YKL124W BNA1P47096 177 aa4.63□□□□□ -1.67
SSH4YKL124W FAA4P47912 694 aaKnown RBP4.63□□□□□ -1.67
SSH4YKL124W MRX6P48564 524 aa4.63□□□□□ -1.67
SSH4YKL124W OCA1P50946 238 aaPredicted RBP4.63□□□□□ -1.67
SSH4YKL124W MTO1P53070 669 aa4.63□□□□□ -1.67
SSH4YKL124W PIR3Q03180 325 aa4.63□□□□□ -1.67
SSH4YKL124W MFB1Q04922 465 aa4.63□□□□□ -1.67
SSH4YKL124W MRX10Q05648 414 aa4.63□□□□□ -1.67
SSH4YKL124W YCG1Q06680 1035 aa4.63□□□□□ -1.67
SSH4YKL124W YPL191CQ08930 360 aa4.63□□□□□ -1.67
SSH4YKL124W SVS1Q12254 260 aa4.63□□□□□ -1.67
SSH4YKL124W ROX1P25042 368 aa4.62□□□□□ -1.67
SSH4YKL124W MSH3P25336 1018 aa4.62□□□□□ -1.67
SSH4YKL124W JNM1P36224 373 aa4.62□□□□□ -1.67
SSH4YKL124W EXO5P38289 585 aa4.62□□□□□ -1.67
SSH4YKL124W TDA3P38758 523 aa4.62□□□□□ -1.67
SSH4YKL124W SMC2P38989 1170 aaKnown RBP4.62□□□□□ -1.67
SSH4YKL124W CAJ1P39101 391 aa4.62□□□□□ -1.67
SSH4YKL124W HEM14P40012 539 aa4.62□□□□□ -1.67
SSH4YKL124W SNZ3P43545 298 aa4.62□□□□□ -1.67
SSH4YKL124W STU2P46675 888 aa4.62□□□□□ -1.67
SSH4YKL124W ASG7P46993 209 aa4.62□□□□□ -1.67
SSH4YKL124W TAD1P53065 400 aa4.62□□□□□ -1.67
SSH4YKL124W COP1P53622 1201 aaKnown RBP4.62□□□□□ -1.67
SSH4YKL124W SNZ2P53824 298 aa4.62□□□□□ -1.67
SSH4YKL124W YML053CQ04978 212 aa4.62□□□□□ -1.67
SSH4YKL124W YLR287CQ05881 355 aa4.62□□□□□ -1.67
SSH4YKL124W UTP13Q05946 817 aaKnown RBP4.62□□□□□ -1.67
SSH4YKL124W YLR352WQ06479 807 aa4.62□□□□□ -1.67
SSH4YKL124W YDL073WQ07454 984 aa4.62□□□□□ -1.67
SSH4YKL124W AIM39Q08223 395 aa4.62□□□□□ -1.67
SSH4YKL124W MSB2P32334 1306 aa4.62□□□□□ -1.67
SSH4YKL124W BI2P03873 423 aa4.61□□□□□ -1.67
SSH4YKL124W BI4P03879 638 aa4.61□□□□□ -1.67
SSH4YKL124W CDC31P06704 161 aaKnown RBP4.61□□□□□ -1.67
SSH4YKL124W YPK1P12688 680 aaKnown RBP4.61□□□□□ -1.67
SSH4YKL124W CYC8P14922 966 aa4.61□□□□□ -1.67
SSH4YKL124W POL4P25615 582 aa4.61□□□□□ -1.67
SSH4YKL124W MSH2P25847 964 aa4.61□□□□□ -1.67
SSH4YKL124W SEC65P29478 273 aa4.61□□□□□ -1.67
SSH4YKL124W CSE1P33307 960 aa4.61□□□□□ -1.67
SSH4YKL124W SRB2P34162 210 aa4.61□□□□□ -1.67
SSH4YKL124W QNS1P38795 714 aaKnown RBP4.61□□□□□ -1.67
SSH4YKL124W LYS9P38999 446 aa4.61□□□□□ -1.67
SSH4YKL124W ERG10P41338 398 aaKnown RBP4.61□□□□□ -1.67
SSH4YKL124W MMM1P41800 426 aa4.61□□□□□ -1.67
SSH4YKL124W RTT101P47050 842 aa4.61□□□□□ -1.67
SSH4YKL124W YJR079WP47126 109 aa4.61□□□□□ -1.67
SSH4YKL124W SRB7P47822 140 aa4.61□□□□□ -1.67
SSH4YKL124W NUP84P52891 726 aa4.61□□□□□ -1.67
SSH4YKL124W PEX31P53203 462 aa4.61□□□□□ -1.67
SSH4YKL124W YNR065CP53751 1116 aa4.61□□□□□ -1.67
SSH4YKL124W CAF120P53836 1060 aa4.61□□□□□ -1.67
SSH4YKL124W VPS75P53853 264 aa4.61□□□□□ -1.67
SSH4YKL124W EAF7P53911 425 aaKnown RBP4.61□□□□□ -1.67
SSH4YKL124W SSL2Q00578 843 aa4.61□□□□□ -1.67
SSH4YKL124W SPG3Q04398 127 aaPredicted RBP4.61□□□□□ -1.67
SSH4YKL124W YDR222WQ04925 415 aa4.61□□□□□ -1.67
SSH4YKL124W THI20Q08224 551 aa4.61□□□□□ -1.67
SSH4YKL124W CLP1Q08685 445 aaPredicted RBP4.61□□□□□ -1.67
SSH4YKL124W NEW1Q08972 1196 aaKnown RBP4.61□□□□□ -1.67
SSH4YKL124W HMI1Q12039 706 aa4.61□□□□□ -1.67
SSH4YKL124W ARP7Q12406 477 aa4.61□□□□□ -1.67
SSH4YKL124W BI3Q9ZZW7 517 aa4.61□□□□□ -1.67
SSH4YKL124W TY1A-DR4O74302 440 aa4.6□□□□□ -1.67
SSH4YKL124W ATP4P05626 244 aa4.6□□□□□ -1.67
SSH4YKL124W SPS1P08458 490 aa4.6□□□□□ -1.67
SSH4YKL124W TY1A-HP0C2I4 478 aaKnown RBP4.6□□□□□ -1.67
SSH4YKL124W TY1A-AP0CX57 440 aa4.6□□□□□ -1.67
SSH4YKL124W TY1A-PR1P0CX58 440 aa4.6□□□□□ -1.67
SSH4YKL124W TY1A-ORP0CX59 440 aa4.6□□□□□ -1.67
SSH4YKL124W TY1A-PR2P0CX60 440 aa4.6□□□□□ -1.67
SSH4YKL124W TY1A-DR5P0CX65 440 aa4.6□□□□□ -1.67
SSH4YKL124W TY1A-ER2P0CX66 440 aa4.6□□□□□ -1.67
SSH4YKL124W TY1A-GR3P0CX67 440 aa4.6□□□□□ -1.67
SSH4YKL124W TY1A-LR1P0CX68 440 aa4.6□□□□□ -1.67
SSH4YKL124W TY1A-MR2P0CX69 440 aa4.6□□□□□ -1.67
SSH4YKL124W GFA1P14742 717 aaKnown RBP4.6□□□□□ -1.67
SSH4YKL124W SEC2P17065 759 aa4.6□□□□□ -1.67
SSH4YKL124W SEC1P30619 724 aaKnown RBP4.6□□□□□ -1.67
SSH4YKL124W ABD1P32783 436 aaPredicted RBP4.6□□□□□ -1.67
SSH4YKL124W RRN3P36070 627 aa4.6□□□□□ -1.67
SSH4YKL124W HSL7P38274 827 aa4.6□□□□□ -1.67
SSH4YKL124W MGE1P38523 228 aa4.6□□□□□ -1.67
SSH4YKL124W CBR1P38626 284 aaKnown RBP4.6□□□□□ -1.67
SSH4YKL124W PSY2P40164 858 aa4.6□□□□□ -1.67
SSH4YKL124W OSW5P40219 148 aa4.6□□□□□ -1.67
SSH4YKL124W RRN7P40992 514 aa4.6□□□□□ -1.67
SSH4YKL124W TY1A-JR2P47099 440 aa4.6□□□□□ -1.67
Retrieved 100 of 5,963 RNA–protein pairs in 16.5 ms