RNA–Protein interactions for RNA: YJR044C

VPS55, Transcript of Late endosomal protein involved in late endosome to vacuole transport, yeastyeast

Gene VPS55, Length 423 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS55YJR044C TFB2Q02939 513 aa1.89□□□□□ -2.11
VPS55YJR044C YMR034CQ05131 434 aaPredicted RBP1.89□□□□□ -2.11
VPS55YJR044C CYK3Q07533 885 aa1.89□□□□□ -2.11
VPS55YJR044C AHA1Q12449 350 aaKnown RBP1.89□□□□□ -2.11
VPS55YJR044C RPS21BQ3E754 87 aaKnown RBP1.89□□□□□ -2.11
VPS55YJR044C BI2P03873 423 aa1.88□□□□□ -2.11
VPS55YJR044C DHR2P36009 735 aaPredicted RBP1.88□□□□□ -2.11
VPS55YJR044C ARC40P38328 384 aaKnown RBP1.88□□□□□ -2.11
VPS55YJR044C IMD2P38697 523 aaKnown RBP1.88□□□□□ -2.11
VPS55YJR044C MGS1P40151 587 aa1.88□□□□□ -2.11
VPS55YJR044C NOP2P40991 618 aaKnown RBP1.88□□□□□ -2.11
VPS55YJR044C IES1P43579 692 aa1.88□□□□□ -2.11
VPS55YJR044C IMD3P50095 523 aaKnown RBP1.88□□□□□ -2.11
VPS55YJR044C TAF4P50105 388 aa1.88□□□□□ -2.11
VPS55YJR044C YNL193WP53870 558 aa1.88□□□□□ -2.11
VPS55YJR044C SNU56Q03782 492 aaKnown RBP1.88□□□□□ -2.11
VPS55YJR044C PPN1Q04119 674 aa1.88□□□□□ -2.11
VPS55YJR044C GRS2Q06817 618 aa1.88□□□□□ -2.11
VPS55YJR044C YOL057WQ08225 711 aa1.88□□□□□ -2.11
VPS55YJR044C DSE3Q08729 430 aa1.88□□□□□ -2.11
VPS55YJR044C ADR1P07248 1323 aa1.88□□□□□ -2.11
VPS55YJR044C NUP145P49687 1317 aa1.88□□□□□ -2.11
VPS55YJR044C GLN4P13188 809 aaKnown RBP1.87□□□□□ -2.11
VPS55YJR044C CAP1P28495 268 aaKnown RBP1.87□□□□□ -2.11
VPS55YJR044C GRX4P32642 244 aa1.87□□□□□ -2.11
VPS55YJR044C TDA3P38758 523 aa1.87□□□□□ -2.11
VPS55YJR044C HXT6P39003 570 aaKnown RBP1.87□□□□□ -2.11
VPS55YJR044C HXT7P39004 570 aa1.87□□□□□ -2.11
VPS55YJR044C PRM2P40534 656 aa1.87□□□□□ -2.11
VPS55YJR044C RET2P43621 546 aa1.87□□□□□ -2.11
VPS55YJR044C BFA1P47113 574 aa1.87□□□□□ -2.11
VPS55YJR044C YJR096WP47137 282 aa1.87□□□□□ -2.11
VPS55YJR044C YDL183CP48569 320 aa1.87□□□□□ -2.11
VPS55YJR044C USA1Q03714 838 aa1.87□□□□□ -2.11
VPS55YJR044C HLR1Q04429 423 aa1.87□□□□□ -2.11
VPS55YJR044C ARR3Q06598 404 aa1.87□□□□□ -2.11
VPS55YJR044C YMR230W-AQ3E7B5 62 aa1.87□□□□□ -2.11
VPS55YJR044C NOP14Q99207 810 aaKnown RBP1.87□□□□□ -2.11
VPS55YJR044C PNO1Q99216 274 aaKnown RBP1.87□□□□□ -2.11
VPS55YJR044C KAR1P11927 433 aa1.86□□□□□ -2.11
VPS55YJR044C FMP46P36141 133 aaKnown RBP1.86□□□□□ -2.11
VPS55YJR044C SCO2P38072 301 aa1.86□□□□□ -2.11
VPS55YJR044C FAT1P38225 669 aa1.86□□□□□ -2.11
VPS55YJR044C NAB3P38996 802 aaKnown RBP RIP-Chip data1.86□□□□□ -2.11not detected
VPS55YJR044C MET30P39014 640 aa1.86□□□□□ -2.11
VPS55YJR044C TPM2P40414 161 aa1.86□□□□□ -2.11
VPS55YJR044C HOS2P53096 452 aaPredicted RBP1.86□□□□□ -2.11
VPS55YJR044C VMS1Q04311 632 aaKnown RBP1.86□□□□□ -2.11
VPS55YJR044C YMR317WQ04893 1140 aa1.86□□□□□ -2.11
VPS55YJR044C PFA4Q12006 378 aa1.86□□□□□ -2.11
VPS55YJR044C UBX3Q12229 455 aa1.86□□□□□ -2.11
VPS55YJR044C NYV1Q12255 253 aa1.86□□□□□ -2.11
VPS55YJR044C YPK1P12688 680 aaKnown RBP1.85□□□□□ -2.11
VPS55YJR044C CDC26P14724 124 aa1.85□□□□□ -2.11
VPS55YJR044C YEF3P16521 1044 aaKnown RBP1.85□□□□□ -2.11
VPS55YJR044C DPB3P27344 201 aa1.85□□□□□ -2.11
VPS55YJR044C SEC65P29478 273 aa1.85□□□□□ -2.11
VPS55YJR044C YBR139WP38109 508 aa1.85□□□□□ -2.11
VPS55YJR044C LRO1P40345 661 aa1.85□□□□□ -2.11
VPS55YJR044C YIL169CP40442 995 aa1.85□□□□□ -2.11
VPS55YJR044C VID28P40547 921 aa1.85□□□□□ -2.11
VPS55YJR044C PMT3P47190 753 aa1.85□□□□□ -2.11
VPS55YJR044C YGR237CP50089 785 aa1.85□□□□□ -2.11
VPS55YJR044C DNM1P54861 757 aa1.85□□□□□ -2.11
VPS55YJR044C ECM9Q02202 377 aa1.85□□□□□ -2.11
VPS55YJR044C NSE5Q03718 556 aa1.85□□□□□ -2.11
VPS55YJR044C RTT103Q05543 409 aa1.85□□□□□ -2.11
VPS55YJR044C YCG1Q06680 1035 aa1.85□□□□□ -2.11
VPS55YJR044C MLH2Q07980 695 aa1.85□□□□□ -2.11
VPS55YJR044C BUD21Q08492 214 aaPredicted RBP1.85□□□□□ -2.11
VPS55YJR044C FAP7Q12055 197 aaPredicted RBP1.85□□□□□ -2.11
VPS55YJR044C ATX2Q12067 313 aa1.85□□□□□ -2.11
VPS55YJR044C AAC1P04710 309 aa1.84□□□□□ -2.11
VPS55YJR044C RPS21AP0C0V8 87 aaKnown RBP1.84□□□□□ -2.11
VPS55YJR044C RPL8AP17076 256 aaKnown RBP1.84□□□□□ -2.11
VPS55YJR044C MRC1P25588 1096 aa1.84□□□□□ -2.11
VPS55YJR044C GDA1P32621 518 aa1.84□□□□□ -2.11
VPS55YJR044C OAF3P36023 863 aa1.84□□□□□ -2.11
VPS55YJR044C FTH1P38310 465 aa1.84□□□□□ -2.11
VPS55YJR044C YHR033WP38690 423 aa1.84□□□□□ -2.11
VPS55YJR044C CKB2P38930 258 aa1.84□□□□□ -2.11
VPS55YJR044C UBP12P39538 1254 aa1.84□□□□□ -2.11
VPS55YJR044C CIN1P40987 1014 aa1.84□□□□□ -2.11
VPS55YJR044C YGR153WP48238 217 aa1.84□□□□□ -2.11
VPS55YJR044C YRB30P53107 440 aaPredicted RBP1.84□□□□□ -2.11
VPS55YJR044C SDA1P53313 767 aaKnown RBP1.84□□□□□ -2.11
VPS55YJR044C FOL1P53848 824 aa1.84□□□□□ -2.11
VPS55YJR044C ECM16Q04217 1267 aaKnown RBP1.84□□□□□ -2.11
VPS55YJR044C CET1O13297 549 aaPredicted RBP1.83□□□□□ -2.12
VPS55YJR044C HMG2P12684 1045 aa1.83□□□□□ -2.12
VPS55YJR044C MAK32P23060 363 aa1.83□□□□□ -2.12
VPS55YJR044C RTT107P38850 1070 aa1.83□□□□□ -2.12
VPS55YJR044C TAN1P53072 289 aaPredicted RBP1.83□□□□□ -2.12
VPS55YJR044C YNR029CP53729 429 aaKnown RBP1.83□□□□□ -2.12
VPS55YJR044C YNL092WP53934 400 aa1.83□□□□□ -2.12
VPS55YJR044C DIG1Q03063 452 aaKnown RBP1.83□□□□□ -2.12
VPS55YJR044C RAD33Q04231 177 aa1.83□□□□□ -2.12
VPS55YJR044C AIM41Q12032 185 aa1.83□□□□□ -2.12
VPS55YJR044C HFI1Q12060 488 aa1.83□□□□□ -2.12
VPS55YJR044C TMA7Q3E764 64 aaKnown RBP1.83□□□□□ -2.12
Retrieved 100 of 5,963 RNA–protein pairs in 17.8 ms