RNA–Protein interactions for RNA: YIL148W

RPL40A, Transcript of Ubiquitin-ribosomal 60S subunit protein L40A fusion protein, yeastyeast

Gene RPL40A, Length 387 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPL40AYIL148W NMA2P53204 395 aa2.72□□□□□ -1.97
RPL40AYIL148W CEG1Q01159 459 aaPredicted RBP2.72□□□□□ -1.97
RPL40AYIL148W ATG21Q02887 496 aa2.72□□□□□ -1.97
RPL40AYIL148W NGL2Q03264 515 aaKnown RBP2.72□□□□□ -1.97
RPL40AYIL148W VPS64Q03944 604 aa2.72□□□□□ -1.97
RPL40AYIL148W MLH3Q12083 715 aa2.72□□□□□ -1.97
RPL40AYIL148W NUC1P08466 329 aa2.71□□□□□ -1.98
RPL40AYIL148W ADY2P25613 283 aa2.71□□□□□ -1.98
RPL40AYIL148W RAD16P31244 790 aa2.71□□□□□ -1.98
RPL40AYIL148W DBF20P32328 564 aa2.71□□□□□ -1.98
RPL40AYIL148W MTC7P32633 139 aa2.71□□□□□ -1.98
RPL40AYIL148W CDS1P38221 457 aa2.71□□□□□ -1.98
RPL40AYIL148W YHR097CP38809 366 aaKnown RBP2.71□□□□□ -1.98
RPL40AYIL148W RRP8P38961 392 aaKnown RBP2.71□□□□□ -1.98
RPL40AYIL148W UME6P39001 836 aa2.71□□□□□ -1.98
RPL40AYIL148W YJL206CP39529 758 aa2.71□□□□□ -1.98
RPL40AYIL148W BDH2P39713 417 aa2.71□□□□□ -1.98
RPL40AYIL148W PMT6P42934 759 aa2.71□□□□□ -1.98
RPL40AYIL148W GSM1P42950 618 aa2.71□□□□□ -1.98
RPL40AYIL148W SMX3P54999 86 aaPredicted RBP2.71□□□□□ -1.98
RPL40AYIL148W SEC5P89102 971 aa2.71□□□□□ -1.98
RPL40AYIL148W EFR3Q03653 782 aaKnown RBP2.71□□□□□ -1.98
RPL40AYIL148W YMR018WQ04364 514 aa2.71□□□□□ -1.98
RPL40AYIL148W GFD1Q04839 188 aaKnown RBP2.71□□□□□ -1.98
RPL40AYIL148W YDL073WQ07454 984 aa2.71□□□□□ -1.98
RPL40AYIL148W IWR1Q07532 353 aaPredicted RBP2.71□□□□□ -1.98
RPL40AYIL148W AAD4Q07747 329 aa2.71□□□□□ -1.98
RPL40AYIL148W IZH3Q07959 543 aa2.71□□□□□ -1.98
RPL40AYIL148W BMS1Q08965 1183 aaKnown RBP2.71□□□□□ -1.98
RPL40AYIL148W MDM20Q12387 796 aaKnown RBP2.71□□□□□ -1.98
RPL40AYIL148W LAM4P38800 1345 aa2.7□□□□□ -1.98
RPL40AYIL148W VPS34P22543 875 aa2.7□□□□□ -1.98
RPL40AYIL148W MCM3P24279 971 aaKnown RBP2.7□□□□□ -1.98
RPL40AYIL148W CLB4P24871 460 aa2.7□□□□□ -1.98
RPL40AYIL148W ILV6P25605 309 aaKnown RBP2.7□□□□□ -1.98
RPL40AYIL148W RPS7AP26786 190 aaKnown RBP2.7□□□□□ -1.98
RPL40AYIL148W RPT3P33298 428 aaKnown RBP2.7□□□□□ -1.98
RPL40AYIL148W NUP120P35729 1037 aa2.7□□□□□ -1.98
RPL40AYIL148W LRO1P40345 661 aa2.7□□□□□ -1.98
RPL40AYIL148W SMK1P41808 388 aa2.7□□□□□ -1.98
RPL40AYIL148W PUS4P48567 403 aaKnown RBP2.7□□□□□ -1.98
RPL40AYIL148W AAT1Q01802 451 aa2.7□□□□□ -1.98
RPL40AYIL148W MRPL13Q02204 264 aa2.7□□□□□ -1.98
RPL40AYIL148W YPL108WQ02872 168 aaPredicted RBP2.7□□□□□ -1.98
RPL40AYIL148W TRS23Q03784 219 aa2.7□□□□□ -1.98
RPL40AYIL148W ENT2Q05785 613 aa2.7□□□□□ -1.98
RPL40AYIL148W DIN7Q12086 430 aa2.7□□□□□ -1.98
RPL40AYIL148W RKI1Q12189 258 aa2.7□□□□□ -1.98
RPL40AYIL148W SIR1P21691 654 aa2.69□□□□□ -1.98
RPL40AYIL148W RIT1P23796 513 aa2.69□□□□□ -1.98
RPL40AYIL148W SSH4P32343 579 aa2.69□□□□□ -1.98
RPL40AYIL148W SET3P36124 751 aa2.69□□□□□ -1.98
RPL40AYIL148W MRPL7P36519 292 aa2.69□□□□□ -1.98
RPL40AYIL148W STB5P38699 743 aa2.69□□□□□ -1.98
RPL40AYIL148W STT3P39007 718 aaKnown RBP2.69□□□□□ -1.98
RPL40AYIL148W KAP123P40069 1113 aaKnown RBP2.69□□□□□ -1.98
RPL40AYIL148W RAD26P40352 1085 aa2.69□□□□□ -1.98
RPL40AYIL148W YIL166CP40445 542 aa2.69□□□□□ -1.98
RPL40AYIL148W IMA5P40884 581 aa2.69□□□□□ -1.98
RPL40AYIL148W YDL183CP48569 320 aa2.69□□□□□ -1.98
RPL40AYIL148W SAP4P53036 818 aa2.69□□□□□ -1.98
RPL40AYIL148W YIP4P53093 235 aa2.69□□□□□ -1.98
RPL40AYIL148W CPR6P53691 371 aaKnown RBP2.69□□□□□ -1.98
RPL40AYIL148W MOT3P54785 490 aaKnown RBP2.69□□□□□ -1.98
RPL40AYIL148W ACS1Q01574 713 aa2.69□□□□□ -1.98
RPL40AYIL148W TRS31Q03337 283 aa2.69□□□□□ -1.98
RPL40AYIL148W VPS72Q03388 795 aa2.69□□□□□ -1.98
RPL40AYIL148W RGC1Q06108 1083 aaKnown RBP2.69□□□□□ -1.98
RPL40AYIL148W ARR3Q06598 404 aa2.69□□□□□ -1.98
RPL40AYIL148W BRE1Q07457 700 aaKnown RBP2.69□□□□□ -1.98
RPL40AYIL148W RPN13O13563 156 aa2.68□□□□□ -1.98
RPL40AYIL148W APA1P16550 321 aaKnown RBP2.68□□□□□ -1.98
RPL40AYIL148W RPA135P22138 1203 aaKnown RBP2.68□□□□□ -1.98
RPL40AYIL148W MRPL9P31334 269 aa2.68□□□□□ -1.98
RPL40AYIL148W XRS2P33301 854 aa2.68□□□□□ -1.98
RPL40AYIL148W CCL1P37366 393 aa2.68□□□□□ -1.98
RPL40AYIL148W PSY4P38193 441 aa2.68□□□□□ -1.98
RPL40AYIL148W NPR3P38742 1146 aa2.68□□□□□ -1.98
RPL40AYIL148W NAB3P38996 802 aaKnown RBP RIP-Chip data2.68□□□□□ -1.98not detected
RPL40AYIL148W POL31P46957 487 aa2.68□□□□□ -1.98
RPL40AYIL148W BUD17P53727 317 aa2.68□□□□□ -1.98
RPL40AYIL148W ADE3P07245 946 aaKnown RBP2.67□□□□□ -1.98
RPL40AYIL148W SPO11P23179 398 aa2.67□□□□□ -1.98
RPL40AYIL148W RER1P25560 188 aa2.67□□□□□ -1.98
RPL40AYIL148W MSS1P32559 526 aaPredicted RBP2.67□□□□□ -1.98
RPL40AYIL148W SIP1P32578 815 aa2.67□□□□□ -1.98
RPL40AYIL148W SLC1P33333 303 aa2.67□□□□□ -1.98
RPL40AYIL148W TEF4P36008 412 aaKnown RBP2.67□□□□□ -1.98
RPL40AYIL148W MTG2P38860 518 aa2.67□□□□□ -1.98
RPL40AYIL148W IES5P40060 125 aa2.67□□□□□ -1.98
RPL40AYIL148W SCS3P53012 380 aa2.67□□□□□ -1.98
RPL40AYIL148W COS12P53053 380 aa2.67□□□□□ -1.98
RPL40AYIL148W TRS130Q03660 1102 aa2.67□□□□□ -1.98
RPL40AYIL148W YDR179W-AQ03983 463 aa2.67□□□□□ -1.98
RPL40AYIL148W CRF1Q04930 467 aa2.67□□□□□ -1.98
RPL40AYIL148W CRT10Q08226 957 aa2.67□□□□□ -1.98
RPL40AYIL148W ZPS1Q12512 249 aa2.67□□□□□ -1.98
RPL40AYIL148W YER175W-AQ8TGU4 54 aa2.67□□□□□ -1.98
RPL40AYIL148W TPK1P06244 397 aa2.66□□□□□ -1.98
RPL40AYIL148W PET122P10355 254 aa2.66□□□□□ -1.98
Retrieved 100 of 5,963 RNA–protein pairs in 13.5 ms