RNA–Protein interactions for RNA: YIL003W

CFD1, Transcript of Highly conserved iron-sulfur cluster binding protein, yeast

Gene CFD1, Length 882 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CFD1	YIL003W	YRB30	P53107	440 aa	Predicted RBP	4.07	□□□□□ -1.76
CFD1	YIL003W	SUN4	P53616	420 aa		4.07	□□□□□ -1.76
CFD1	YIL003W	SQS1	P53866	767 aa	Known RBP	4.07	□□□□□ -1.76
CFD1	YIL003W	MRPL13	Q02204	264 aa		4.07	□□□□□ -1.76
CFD1	YIL003W	PPN1	Q04119	674 aa		4.07	□□□□□ -1.76
CFD1	YIL003W	TGL5	Q12043	749 aa		4.07	□□□□□ -1.76
CFD1	YIL003W	CLF1	Q12309	687 aa	Predicted RBP	4.07	□□□□□ -1.76
CFD1	YIL003W	HRP1	Q99383	534 aa	Known RBP	4.07	□□□□□ -1.76
CFD1	YIL003W	TY3B-I	Q7LHG5	1498 aa	Known RBP	4.06	□□□□□ -1.76
CFD1	YIL003W	RAD9	P14737	1309 aa		4.06	□□□□□ -1.76
CFD1	YIL003W	NUC1	P08466	329 aa		4.06	□□□□□ -1.76
CFD1	YIL003W	MTF2	P10849	440 aa		4.06	□□□□□ -1.76
CFD1	YIL003W	HMG2	P12684	1045 aa		4.06	□□□□□ -1.76
CFD1	YIL003W	POL3	P15436	1097 aa		4.06	□□□□□ -1.76
CFD1	YIL003W	SIR1	P21691	654 aa		4.06	□□□□□ -1.76
CFD1	YIL003W	ARG1	P22768	420 aa		4.06	□□□□□ -1.76
CFD1	YIL003W	SWI4	P25302	1093 aa	Known RBP	4.06	□□□□□ -1.76
CFD1	YIL003W	CWH43	P25618	953 aa		4.06	□□□□□ -1.76
CFD1	YIL003W	YBR138C	P38277	524 aa		4.06	□□□□□ -1.76
CFD1	YIL003W	GET2	P40056	285 aa		4.06	□□□□□ -1.76
CFD1	YIL003W	RAD26	P40352	1085 aa		4.06	□□□□□ -1.76
CFD1	YIL003W	ACS1	Q01574	713 aa		4.06	□□□□□ -1.76
CFD1	YIL003W	GAD1	Q04792	585 aa		4.06	□□□□□ -1.76
CFD1	YIL003W	TRI1	Q05024	226 aa		4.06	□□□□□ -1.76
CFD1	YIL003W	TMA10	Q06177	86 aa		4.06	□□□□□ -1.76
CFD1	YIL003W	NOP12	Q08208	459 aa	Known RBP	4.06	□□□□□ -1.76
CFD1	YIL003W	HOS1	Q12214	470 aa		4.06	□□□□□ -1.76
CFD1	YIL003W	TRM11	Q12463	433 aa		4.06	□□□□□ -1.76
CFD1	YIL003W	ATG11	Q12527	1178 aa		4.06	□□□□□ -1.76
CFD1	YIL003W	ROM2	P51862	1356 aa	Known RBP	4.05	□□□□□ -1.76
CFD1	YIL003W	INH1	P01097	85 aa		4.05	□□□□□ -1.76
CFD1	YIL003W	SNF1	P06782	633 aa	Known RBP	4.05	□□□□□ -1.76
CFD1	YIL003W	UBC1	P21734	215 aa	Known RBP	4.05	□□□□□ -1.76
CFD1	YIL003W	PRP22	P24384	1145 aa	Known RBP	4.05	□□□□□ -1.76
CFD1	YIL003W	CLB4	P24871	460 aa		4.05	□□□□□ -1.76
CFD1	YIL003W	KAR4	P25583	335 aa		4.05	□□□□□ -1.76
CFD1	YIL003W	FRD1	P32614	470 aa	Known RBP	4.05	□□□□□ -1.76
CFD1	YIL003W	SLC1	P33333	303 aa		4.05	□□□□□ -1.76
CFD1	YIL003W	CTF13	P35203	478 aa		4.05	□□□□□ -1.76
CFD1	YIL003W	CDS1	P38221	457 aa		4.05	□□□□□ -1.76
CFD1	YIL003W	CHS7	P38843	316 aa		4.05	□□□□□ -1.76
CFD1	YIL003W	AXL2	P38928	823 aa		4.05	□□□□□ -1.76
CFD1	YIL003W	LYS9	P38999	446 aa		4.05	□□□□□ -1.76
CFD1	YIL003W	PLB1	P39105	664 aa		4.05	□□□□□ -1.76
CFD1	YIL003W	NDE1	P40215	560 aa		4.05	□□□□□ -1.76
CFD1	YIL003W	TMA108	P40462	946 aa		4.05	□□□□□ -1.76
CFD1	YIL003W	HOS4	P40480	1083 aa		4.05	□□□□□ -1.76
CFD1	YIL003W	TAH11	P47112	604 aa		4.05	□□□□□ -1.76
CFD1	YIL003W	RRT6	P53117	311 aa	Predicted RBP	4.05	□□□□□ -1.76
CFD1	YIL003W	SPO1	P53541	631 aa		4.05	□□□□□ -1.76
CFD1	YIL003W	TFC6	Q06339	672 aa		4.05	□□□□□ -1.76
CFD1	YIL003W	IWR1	Q07532	353 aa	Predicted RBP	4.05	□□□□□ -1.76
CFD1	YIL003W	AAD4	Q07747	329 aa		4.05	□□□□□ -1.76
CFD1	YIL003W	POM34	Q12445	299 aa		4.05	□□□□□ -1.76
CFD1	YIL003W	PMA1	P05030	918 aa	Known RBP	4.04	□□□□□ -1.76
CFD1	YIL003W	RPS9B	P05755	195 aa	Known RBP	4.04	□□□□□ -1.76
CFD1	YIL003W	MIS1	P09440	975 aa	Known RBP	4.04	□□□□□ -1.76
CFD1	YIL003W	KIN82	P25341	720 aa		4.04	□□□□□ -1.76
CFD1	YIL003W	IMP2'	P32351	346 aa		4.04	□□□□□ -1.76
CFD1	YIL003W	MFT1	P33441	392 aa	Known RBP	4.04	□□□□□ -1.76
CFD1	YIL003W	IFA38	P38286	347 aa		4.04	□□□□□ -1.76
CFD1	YIL003W	CRG1	P38892	291 aa	RIP-Chip data	4.04	□□□□□ -1.76	not detected
CFD1	YIL003W	CCT3	P39077	534 aa	Known RBP	4.04	□□□□□ -1.76
CFD1	YIL003W	PSF2	P40359	213 aa		4.04	□□□□□ -1.76
CFD1	YIL003W	FKH2	P41813	862 aa		4.04	□□□□□ -1.76
CFD1	YIL003W	YDL183C	P48569	320 aa		4.04	□□□□□ -1.76
CFD1	YIL003W	MTL1	P53214	551 aa		4.04	□□□□□ -1.76
CFD1	YIL003W	MDR1	P53258	950 aa		4.04	□□□□□ -1.76
CFD1	YIL003W	ESF2	P53743	316 aa	Known RBP	4.04	□□□□□ -1.76
CFD1	YIL003W	GIR2	Q03768	265 aa	Predicted RBP	4.04	□□□□□ -1.76
CFD1	YIL003W	VID22	Q05934	901 aa		4.04	□□□□□ -1.76
CFD1	YIL003W	YLR224W	Q05947	369 aa		4.04	□□□□□ -1.76
CFD1	YIL003W	MED1	Q12321	566 aa		4.04	□□□□□ -1.76
CFD1	YIL003W	RTP1	Q12751	981 aa		4.04	□□□□□ -1.76
CFD1	YIL003W	ADE6	P38972	1358 aa	Known RBP	4.03	□□□□□ -1.76
CFD1	YIL003W	TY4B-H	P0C2J7	1802 aa		4.03	□□□□□ -1.76
CFD1	YIL003W	TY4B-J	P47024	1803 aa		4.03	□□□□□ -1.76
CFD1	YIL003W	ADE3	P07245	946 aa	Known RBP	4.03	□□□□□ -1.76
CFD1	YIL003W	GUK1	P15454	187 aa	Known RBP	4.03	□□□□□ -1.76
CFD1	YIL003W	TUP1	P16649	713 aa		4.03	□□□□□ -1.76
CFD1	YIL003W	RIT1	P23796	513 aa		4.03	□□□□□ -1.76
CFD1	YIL003W	CAD1	P24813	409 aa	Known RBP	4.03	□□□□□ -1.76
CFD1	YIL003W	PRP45	P28004	379 aa	Predicted RBP	4.03	□□□□□ -1.76
CFD1	YIL003W	DCG1	P32460	244 aa		4.03	□□□□□ -1.76
CFD1	YIL003W	MUD2	P36084	527 aa	Known RBP	4.03	□□□□□ -1.76
CFD1	YIL003W	SET3	P36124	751 aa		4.03	□□□□□ -1.76
CFD1	YIL003W	KAP123	P40069	1113 aa	Known RBP	4.03	□□□□□ -1.76
CFD1	YIL003W	FTR1	P40088	404 aa		4.03	□□□□□ -1.76
CFD1	YIL003W	DPH1	P40487	425 aa	Known RBP	4.03	□□□□□ -1.76
CFD1	YIL003W	GSM1	P42950	618 aa		4.03	□□□□□ -1.76
CFD1	YIL003W	PHO23	P50947	330 aa		4.03	□□□□□ -1.76
CFD1	YIL003W	ERG5	P54781	538 aa		4.03	□□□□□ -1.76
CFD1	YIL003W	CTK1	Q03957	528 aa	Known RBP	4.03	□□□□□ -1.76
CFD1	YIL003W	RGC1	Q06108	1083 aa	Known RBP	4.03	□□□□□ -1.76
CFD1	YIL003W	THI22	Q06490	572 aa		4.03	□□□□□ -1.76
CFD1	YIL003W	YCG1	Q06680	1035 aa		4.03	□□□□□ -1.76
CFD1	YIL003W	CRD1	Q07560	283 aa		4.03	□□□□□ -1.76
CFD1	YIL003W	TRM8	Q12009	286 aa		4.03	□□□□□ -1.76
CFD1	YIL003W	URB1	P34241	1764 aa	Known RBP	4.03	□□□□□ -1.76
CFD1	YIL003W	SAN1	P22470	610 aa		4.02	□□□□□ -1.77

Retrieved 100 of 5,963 RNA–protein pairs in 14.3 ms