RNA–Protein interactions for RNA: YHR111W

UBA4, Transcript of E1-like protein that activates Urm1p before urmylation, yeastyeast

Gene UBA4, Length 1,323 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UBA4YHR111W GUT1P32190 709 aa10.51□□□□□ -0.73
UBA4YHR111W YBL055CP34220 418 aaPredicted RBP10.51□□□□□ -0.73
UBA4YHR111W CRP1P38845 465 aaKnown RBP10.51□□□□□ -0.73
UBA4YHR111W GDH3P39708 457 aa10.51□□□□□ -0.73
UBA4YHR111W RRT5P43607 289 aa10.51□□□□□ -0.73
UBA4YHR111W BTN2P53286 410 aa10.51□□□□□ -0.73
UBA4YHR111W NGL3Q03210 505 aa10.51□□□□□ -0.73
UBA4YHR111W INP2Q03824 705 aa10.51□□□□□ -0.73
UBA4YHR111W CLC1P17891 233 aa10.5□□□□□ -0.73
UBA4YHR111W HXT3P32466 567 aaKnown RBP10.5□□□□□ -0.73
UBA4YHR111W MRPL40P36534 297 aa10.5□□□□□ -0.73
UBA4YHR111W FUI1P38196 639 aa10.5□□□□□ -0.73
UBA4YHR111W MCX1P38323 520 aaPredicted RBP10.5□□□□□ -0.73
UBA4YHR111W SAK1P38990 1142 aa10.5□□□□□ -0.73
UBA4YHR111W SEC9P40357 651 aa10.5□□□□□ -0.73
UBA4YHR111W MNN11P46985 422 aaKnown RBP10.5□□□□□ -0.73
UBA4YHR111W RSB1Q08417 382 aa10.5□□□□□ -0.73
UBA4YHR111W CLP1Q08685 445 aaPredicted RBP10.5□□□□□ -0.73
UBA4YHR111W GPM3Q12326 303 aa10.5□□□□□ -0.73
UBA4YHR111W YLR462WO13556 202 aa10.49□□□□□ -0.73
UBA4YHR111W PYC1P11154 1178 aaKnown RBP10.49□□□□□ -0.73
UBA4YHR111W STO1P34160 861 aaKnown RBP10.49□□□□□ -0.73
UBA4YHR111W ADD66P36040 267 aa10.49□□□□□ -0.73
UBA4YHR111W RCK2P38623 610 aa10.49□□□□□ -0.73
UBA4YHR111W SRP68P38687 599 aaKnown RBP10.49□□□□□ -0.73
UBA4YHR111W YHL049CP38722 271 aa10.49□□□□□ -0.73
UBA4YHR111W YEL028WP39989 153 aa10.49□□□□□ -0.73
UBA4YHR111W YFL064CP43540 174 aa10.49□□□□□ -0.73
UBA4YHR111W AMA1P50082 593 aa10.49□□□□□ -0.73
UBA4YHR111W YNR063WP53749 607 aa10.49□□□□□ -0.73
UBA4YHR111W THI7Q05998 598 aa10.49□□□□□ -0.73
UBA4YHR111W TPO1Q07824 586 aa10.49□□□□□ -0.73
UBA4YHR111W YBL111CQ3E7Y5 667 aa10.49□□□□□ -0.73
UBA4YHR111W MIS1P09440 975 aaKnown RBP10.48□□□□□ -0.73
UBA4YHR111W PMS1P14242 873 aa10.48□□□□□ -0.73
UBA4YHR111W DAL81P21657 970 aa10.48□□□□□ -0.73
UBA4YHR111W YCR015CP25616 317 aa10.48□□□□□ -0.73
UBA4YHR111W YJU3P28321 313 aa10.48□□□□□ -0.73
UBA4YHR111W BIT2P38346 545 aa10.48□□□□□ -0.73
UBA4YHR111W PPX1P38698 397 aa10.48□□□□□ -0.73
UBA4YHR111W AIM18P38884 321 aa10.48□□□□□ -0.73
UBA4YHR111W YJL132WP47014 750 aa10.48□□□□□ -0.73
UBA4YHR111W RSM7P47150 247 aa10.48□□□□□ -0.73
UBA4YHR111W TCB2P48231 1178 aa10.48□□□□□ -0.73
UBA4YHR111W TDA7P53882 636 aaPredicted RBP10.48□□□□□ -0.73
UBA4YHR111W LCB5Q06147 687 aaKnown RBP10.48□□□□□ -0.73
UBA4YHR111W YLR046CQ12253 270 aa10.48□□□□□ -0.73
UBA4YHR111W EFG1Q3E705 233 aaKnown RBP10.48□□□□□ -0.73
UBA4YHR111W ENO1P00924 437 aaKnown RBP10.47□□□□□ -0.73
UBA4YHR111W TUB3P09734 445 aaKnown RBP10.47□□□□□ -0.73
UBA4YHR111W SRB4P32569 687 aa10.47□□□□□ -0.73
UBA4YHR111W AIM26P32858 118 aa10.47□□□□□ -0.73
UBA4YHR111W TYE7P33122 291 aaPredicted RBP10.47□□□□□ -0.73
UBA4YHR111W MFT1P33441 392 aaKnown RBP10.47□□□□□ -0.73
UBA4YHR111W TCD2P36101 447 aaKnown RBP10.47□□□□□ -0.73
UBA4YHR111W GIP1P38229 639 aa10.47□□□□□ -0.73
UBA4YHR111W PCA1P38360 1216 aa10.47□□□□□ -0.73
UBA4YHR111W FLC2P39719 783 aa10.47□□□□□ -0.73
UBA4YHR111W STL1P39932 569 aa10.47□□□□□ -0.73
UBA4YHR111W LCP5P40079 357 aaPredicted RBP10.47□□□□□ -0.73
UBA4YHR111W RPS10BP46784 105 aaKnown RBP10.47□□□□□ -0.73
UBA4YHR111W AIM23P47015 356 aa10.47□□□□□ -0.73
UBA4YHR111W RFX1P48743 811 aa10.47□□□□□ -0.73
UBA4YHR111W YGR127WP53275 312 aa10.47□□□□□ -0.73
UBA4YHR111W VPS9P54787 451 aa10.47□□□□□ -0.73
UBA4YHR111W PEX13P80667 386 aa10.47□□□□□ -0.73
UBA4YHR111W RPS10AQ08745 105 aaPredicted RBP10.47□□□□□ -0.73
UBA4YHR111W PER33Q12144 273 aa10.47□□□□□ -0.73
UBA4YHR111W AFI1Q99222 893 aa10.47□□□□□ -0.73
UBA4YHR111W SEY1Q99287 776 aa10.47□□□□□ -0.73
UBA4YHR111W SEN1Q00416 2231 aaKnown RBP10.46□□□□□ -0.73
UBA4YHR111W GEX1P25596 615 aa10.46□□□□□ -0.73
UBA4YHR111W KAR9P32526 644 aa10.46□□□□□ -0.73
UBA4YHR111W GEX2P36173 615 aa10.46□□□□□ -0.73
UBA4YHR111W APM3P38153 483 aa10.46□□□□□ -0.73
UBA4YHR111W GIP4P39732 760 aa10.46□□□□□ -0.73
UBA4YHR111W ARG2P40360 574 aa10.46□□□□□ -0.73
UBA4YHR111W ASN2P49090 572 aaKnown RBP10.46□□□□□ -0.73
UBA4YHR111W NUP84P52891 726 aa10.46□□□□□ -0.73
UBA4YHR111W SMA1Q02651 245 aa10.46□□□□□ -0.73
UBA4YHR111W HPF1Q05164 967 aa10.46□□□□□ -0.73
UBA4YHR111W SWC7Q06707 132 aa10.46□□□□□ -0.73
UBA4YHR111W RAD10P06838 210 aa10.45□□□□□ -0.74
UBA4YHR111W SFL1P20134 766 aa10.45□□□□□ -0.74
UBA4YHR111W CKI1P20485 582 aa10.45□□□□□ -0.74
UBA4YHR111W SLY1P22213 666 aa10.45□□□□□ -0.74
UBA4YHR111W PYC2P32327 1180 aaKnown RBP10.45□□□□□ -0.74
UBA4YHR111W SLX5P32828 619 aaKnown RBP10.45□□□□□ -0.74
UBA4YHR111W PXA2P34230 853 aa10.45□□□□□ -0.74
UBA4YHR111W PIK1P39104 1066 aa10.45□□□□□ -0.74
UBA4YHR111W SAW1P39735 261 aa10.45□□□□□ -0.74
UBA4YHR111W MVP1P40959 511 aaKnown RBP10.45□□□□□ -0.74
UBA4YHR111W DLD2P46681 530 aaKnown RBP10.45□□□□□ -0.74
UBA4YHR111W YML6P51998 286 aa10.45□□□□□ -0.74
UBA4YHR111W NRD1P53617 575 aaKnown RBP RIP-Chip data10.45□□□□□ -0.74not detected
UBA4YHR111W PIR1Q03178 341 aa10.45□□□□□ -0.74
UBA4YHR111W PEX11Q12462 236 aa10.45□□□□□ -0.74
UBA4YHR111W RAD3P06839 778 aa10.44□□□□□ -0.74
UBA4YHR111W SEC63P14906 663 aa10.44□□□□□ -0.74
UBA4YHR111W CAJ1P39101 391 aa10.44□□□□□ -0.74
Retrieved 100 of 5,963 RNA–protein pairs in 12.4 ms