RNA–Protein interactions for RNA: YGR194C

XKS1, Transcript of Xylulokinase, yeast

Gene XKS1, Length 1,803 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
XKS1	YGR194C	BLI1	P35727	113 aa		4.54	□□□□□ -1.68
XKS1	YGR194C	KES1	P35844	434 aa	Known RBP	4.54	□□□□□ -1.68
XKS1	YGR194C	RFC3	P38629	340 aa		4.54	□□□□□ -1.68
XKS1	YGR194C	YHL049C	P38722	271 aa		4.54	□□□□□ -1.68
XKS1	YGR194C	SPL2	P38839	148 aa		4.54	□□□□□ -1.68
XKS1	YGR194C	STN1	P38960	494 aa		4.54	□□□□□ -1.68
XKS1	YGR194C	PNT1	P38969	423 aa		4.54	□□□□□ -1.68
XKS1	YGR194C	YEL075C	P39972	122 aa		4.54	□□□□□ -1.68
XKS1	YGR194C	LCP5	P40079	357 aa	Predicted RBP	4.54	□□□□□ -1.68
XKS1	YGR194C	YER189W	P40104	122 aa		4.54	□□□□□ -1.68
XKS1	YGR194C	PDS1	P40316	373 aa	Predicted RBP	4.54	□□□□□ -1.68
XKS1	YGR194C	YRB1	P41920	201 aa	Known RBP	4.54	□□□□□ -1.68
XKS1	YGR194C	YFL064C	P43540	174 aa		4.54	□□□□□ -1.68
XKS1	YGR194C	SNO2	P53823	222 aa		4.54	□□□□□ -1.68
XKS1	YGR194C	YMR018W	Q04364	514 aa		4.54	□□□□□ -1.68
XKS1	YGR194C	MYO5	Q04439	1219 aa	Known RBP	4.54	□□□□□ -1.68
XKS1	YGR194C	DON1	Q05610	365 aa		4.54	□□□□□ -1.68
XKS1	YGR194C	YLR225C	Q05948	407 aa	Known RBP	4.54	□□□□□ -1.68
XKS1	YGR194C	YLH47	Q06493	454 aa		4.54	□□□□□ -1.68
XKS1	YGR194C	CHS5	Q12114	671 aa	Known RBP	4.54	□□□□□ -1.68
XKS1	YGR194C	HIF1	Q12373	385 aa		4.54	□□□□□ -1.68
XKS1	YGR194C	RKM4	Q12504	494 aa		4.54	□□□□□ -1.68
XKS1	YGR194C	YBL111C	Q3E7Y5	667 aa		4.54	□□□□□ -1.68
XKS1	YGR194C	PRP6	P19735	899 aa	Predicted RBP	4.53	□□□□□ -1.68
XKS1	YGR194C	CLN2	P20438	545 aa		4.53	□□□□□ -1.68
XKS1	YGR194C	CDC48	P25694	835 aa	Known RBP	4.53	□□□□□ -1.68
XKS1	YGR194C	MGM1	P32266	881 aa		4.53	□□□□□ -1.68
XKS1	YGR194C	RIB7	P33312	244 aa		4.53	□□□□□ -1.68
XKS1	YGR194C	SLA2	P33338	968 aa		4.53	□□□□□ -1.68
XKS1	YGR194C	AIM3	P38266	947 aa	Known RBP	4.53	□□□□□ -1.68
XKS1	YGR194C	YBP1	P38315	674 aa		4.53	□□□□□ -1.68
XKS1	YGR194C	RRT2	P38332	387 aa		4.53	□□□□□ -1.68
XKS1	YGR194C	HSM3	P38348	480 aa		4.53	□□□□□ -1.68
XKS1	YGR194C	RBL2	P48606	106 aa	Known RBP	4.53	□□□□□ -1.68
XKS1	YGR194C	SHE10	P53075	577 aa		4.53	□□□□□ -1.68
XKS1	YGR194C	IST1	P53843	298 aa	Predicted RBP	4.53	□□□□□ -1.68
XKS1	YGR194C	BNI5	P53890	448 aa	Known RBP	4.53	□□□□□ -1.68
XKS1	YGR194C	CBK1	P53894	756 aa		4.53	□□□□□ -1.68
XKS1	YGR194C	RPM2	Q02773	1202 aa		4.53	□□□□□ -1.68
XKS1	YGR194C	SHR3	Q02774	210 aa		4.53	□□□□□ -1.68
XKS1	YGR194C	JIP5	Q06214	492 aa	Predicted RBP	4.53	□□□□□ -1.68
XKS1	YGR194C	BUG1	Q12191	341 aa		4.53	□□□□□ -1.68
XKS1	YGR194C	FAS2	P19097	1887 aa	Known RBP	4.53	□□□□□ -1.68
XKS1	YGR194C	GSY1	P23337	708 aa		4.53	□□□□□ -1.68
XKS1	YGR194C	SPS22	P25380	463 aa		4.53	□□□□□ -1.68
XKS1	YGR194C	PRO3	P32263	286 aa	Known RBP	4.53	□□□□□ -1.68
XKS1	YGR194C	TFC4	P33339	1025 aa		4.53	□□□□□ -1.68
XKS1	YGR194C	PTK1	P36002	662 aa	Predicted RBP	4.53	□□□□□ -1.68
XKS1	YGR194C	CCL1	P37366	393 aa		4.53	□□□□□ -1.68
XKS1	YGR194C	VHC1	P38329	1120 aa		4.53	□□□□□ -1.68
XKS1	YGR194C	ALG5	P40350	334 aa		4.53	□□□□□ -1.68
XKS1	YGR194C	JEM1	P40358	645 aa		4.53	□□□□□ -1.68
XKS1	YGR194C	YGL176C	P46945	554 aa		4.53	□□□□□ -1.68
XKS1	YGR194C	RNR4	P49723	345 aa	Known RBP	4.53	□□□□□ -1.68
XKS1	YGR194C	TAF6	P53040	516 aa		4.53	□□□□□ -1.68
XKS1	YGR194C	YGR016W	P53209	190 aa		4.53	□□□□□ -1.68
XKS1	YGR194C	RET3	P53600	189 aa		4.53	□□□□□ -1.68
XKS1	YGR194C	ACL4	Q03771	387 aa		4.53	□□□□□ -1.68
XKS1	YGR194C	MEU1	Q07938	337 aa	Known RBP RIP-Chip data	4.53	□□□□□ -1.68	not detected
XKS1	YGR194C	CIR2	Q08822	631 aa		4.53	□□□□□ -1.68
XKS1	YGR194C	CDC53	Q12018	815 aa	Known RBP	4.53	□□□□□ -1.68
XKS1	YGR194C	YPT6	Q99260	215 aa		4.53	□□□□□ -1.68
XKS1	YGR194C	RAD61	Q99359	647 aa		4.53	□□□□□ -1.68
XKS1	YGR194C	TUS1	Q06412	1307 aa		4.52	□□□□□ -1.69
XKS1	YGR194C	ADE3	P07245	946 aa	Known RBP	4.52	□□□□□ -1.69
XKS1	YGR194C	ILV2	P07342	687 aa	Known RBP	4.52	□□□□□ -1.69
XKS1	YGR194C	SUI3	P09064	285 aa	Known RBP	4.52	□□□□□ -1.69
XKS1	YGR194C	SWI6	P09959	803 aa		4.52	□□□□□ -1.69
XKS1	YGR194C	CKA2	P19454	339 aa		4.52	□□□□□ -1.69
XKS1	YGR194C	ISY1	P21374	235 aa	Predicted RBP	4.52	□□□□□ -1.69
XKS1	YGR194C	RPL8B	P29453	256 aa	Known RBP	4.52	□□□□□ -1.69
XKS1	YGR194C	VPH2	P32341	215 aa		4.52	□□□□□ -1.69
XKS1	YGR194C	YKL023W	P36103	277 aa	Known RBP	4.52	□□□□□ -1.69
XKS1	YGR194C	GEM1	P39722	662 aa		4.52	□□□□□ -1.69
XKS1	YGR194C	TAF1	P46677	1066 aa		4.52	□□□□□ -1.69
XKS1	YGR194C	FMP33	P46998	180 aa		4.52	□□□□□ -1.69
XKS1	YGR194C	NOP9	P47077	666 aa	Known RBP	4.52	□□□□□ -1.69
XKS1	YGR194C	USE1	P53146	245 aa		4.52	□□□□□ -1.69
XKS1	YGR194C	PTA1	Q01329	785 aa	Predicted RBP	4.52	□□□□□ -1.69
XKS1	YGR194C	MTG1	Q03151	367 aa	Predicted RBP	4.52	□□□□□ -1.69
XKS1	YGR194C	PPM1	Q04081	328 aa		4.52	□□□□□ -1.69
XKS1	YGR194C	SPO20	Q04359	397 aa		4.52	□□□□□ -1.69
XKS1	YGR194C	TSR2	Q06672	205 aa	Known RBP	4.52	□□□□□ -1.69
XKS1	YGR194C	MSH5	Q12175	901 aa		4.52	□□□□□ -1.69
XKS1	YGR194C	SVS1	Q12254	260 aa		4.52	□□□□□ -1.69
XKS1	YGR194C	TRM11	Q12463	433 aa		4.52	□□□□□ -1.69
XKS1	YGR194C	SEM1	O94742	89 aa		4.51	□□□□□ -1.69
XKS1	YGR194C	CYC1	P00044	109 aa	Predicted RBP	4.51	□□□□□ -1.69
XKS1	YGR194C	THS1	P04801	734 aa	Known RBP	4.51	□□□□□ -1.69
XKS1	YGR194C	CBF1	P17106	351 aa		4.51	□□□□□ -1.69
XKS1	YGR194C	MRPL25	P23369	157 aa		4.51	□□□□□ -1.69
XKS1	YGR194C	RAD16	P31244	790 aa		4.51	□□□□□ -1.69
XKS1	YGR194C	YKL107W	P34251	309 aa		4.51	□□□□□ -1.69
XKS1	YGR194C	PAM1	P37304	830 aa	Known RBP	4.51	□□□□□ -1.69
XKS1	YGR194C	YBR032W	P38223	100 aa		4.51	□□□□□ -1.69
XKS1	YGR194C	FES1	P38260	290 aa		4.51	□□□□□ -1.69
XKS1	YGR194C	MSG5	P38590	489 aa		4.51	□□□□□ -1.69
XKS1	YGR194C	HIS2	P38635	335 aa		4.51	□□□□□ -1.69
XKS1	YGR194C	CCT3	P39077	534 aa	Known RBP	4.51	□□□□□ -1.69
XKS1	YGR194C	SPC72	P39723	622 aa		4.51	□□□□□ -1.69

Retrieved 100 of 5,963 RNA–protein pairs in 14.4 ms