RNA–Protein interactions for RNA: YGR028W

MSP1, Transcript of Highly-conserved N-terminally anchored AAA-ATPase, yeastyeast

Gene MSP1, Length 1,089 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MSP1YGR028W GTS1P40956 396 aa6.83□□□□□ -1.32
MSP1YGR028W DAS1P47005 663 aa6.83□□□□□ -1.32
MSP1YGR028W UBP3Q01477 912 aaKnown RBP RIP-Chip data6.83□□□□□ -1.32not detected
MSP1YGR028W PRM6Q04705 352 aa6.83□□□□□ -1.32
MSP1YGR028W SPP382Q06411 708 aaPredicted RBP6.83□□□□□ -1.32
MSP1YGR028W ABP140Q08641 628 aaKnown RBP6.83□□□□□ -1.32
MSP1YGR028W TPK1P06244 397 aa6.82□□□□□ -1.32
MSP1YGR028W CHS1P08004 1131 aa6.82□□□□□ -1.32
MSP1YGR028W NAT1P12945 854 aaKnown RBP6.82□□□□□ -1.32
MSP1YGR028W SGF29P25554 259 aa6.82□□□□□ -1.32
MSP1YGR028W SWI3P32591 825 aa6.82□□□□□ -1.32
MSP1YGR028W BDH2P39713 417 aa6.82□□□□□ -1.32
MSP1YGR028W TAF1P46677 1066 aa6.82□□□□□ -1.32
MSP1YGR028W FAA4P47912 694 aaKnown RBP6.82□□□□□ -1.32
MSP1YGR028W YPT11P48559 417 aa6.82□□□□□ -1.32
MSP1YGR028W HST1P53685 503 aa6.82□□□□□ -1.32
MSP1YGR028W NOP13P53883 403 aaKnown RBP RIP-Chip data6.82□□□□□ -1.32not detected
MSP1YGR028W HER2Q03557 464 aa6.82□□□□□ -1.32
MSP1YGR028W NSE5Q03718 556 aa6.82□□□□□ -1.32
MSP1YGR028W TSR1Q07381 788 aaKnown RBP6.82□□□□□ -1.32
MSP1YGR028W YPR027CQ12079 277 aa6.82□□□□□ -1.32
MSP1YGR028W DDP1Q99321 188 aaKnown RBP6.82□□□□□ -1.32
MSP1YGR028W GAL10P04397 699 aa6.81□□□□□ -1.32
MSP1YGR028W INO1P11986 533 aa6.81□□□□□ -1.32
MSP1YGR028W SNF5P18480 905 aa6.81□□□□□ -1.32
MSP1YGR028W HSP78P33416 811 aa6.81□□□□□ -1.32
MSP1YGR028W SEG2P34250 1132 aa6.81□□□□□ -1.32
MSP1YGR028W YKL023WP36103 277 aaKnown RBP6.81□□□□□ -1.32
MSP1YGR028W DUG2P38149 878 aa6.81□□□□□ -1.32
MSP1YGR028W ARP1P38696 384 aa6.81□□□□□ -1.32
MSP1YGR028W CCT5P40413 562 aaKnown RBP6.81□□□□□ -1.32
MSP1YGR028W SMC3P47037 1230 aa6.81□□□□□ -1.32
MSP1YGR028W ECL1P48235 211 aa6.81□□□□□ -1.32
MSP1YGR028W YGR237CP50089 785 aa6.81□□□□□ -1.32
MSP1YGR028W LEE1Q02799 301 aaKnown RBP6.81□□□□□ -1.32
MSP1YGR028W MUB1Q03162 620 aa6.81□□□□□ -1.32
MSP1YGR028W WAR1Q03631 944 aa6.81□□□□□ -1.32
MSP1YGR028W GIR2Q03768 265 aaPredicted RBP6.81□□□□□ -1.32
MSP1YGR028W YHM2Q04013 314 aa6.81□□□□□ -1.32
MSP1YGR028W IWR1Q07532 353 aaPredicted RBP6.81□□□□□ -1.32
MSP1YGR028W RLP24Q07915 199 aaKnown RBP6.81□□□□□ -1.32
MSP1YGR028W RSB1Q08417 382 aa6.81□□□□□ -1.32
MSP1YGR028W FAL1Q12099 399 aaKnown RBP6.81□□□□□ -1.32
MSP1YGR028W LPX1Q12405 387 aaKnown RBP6.81□□□□□ -1.32
MSP1YGR028W RPS14AP06367 137 aaKnown RBP6.8□□□□□ -1.32
MSP1YGR028W YER152CP10356 443 aa6.8□□□□□ -1.32
MSP1YGR028W SIR1P21691 654 aa6.8□□□□□ -1.32
MSP1YGR028W GAC1P28006 793 aa6.8□□□□□ -1.32
MSP1YGR028W CDC11P32458 415 aa6.8□□□□□ -1.32
MSP1YGR028W EFB1P32471 206 aaKnown RBP6.8□□□□□ -1.32
MSP1YGR028W FRE1P32791 686 aa6.8□□□□□ -1.32
MSP1YGR028W MED6P38782 295 aa6.8□□□□□ -1.32
MSP1YGR028W RPS14BP39516 138 aaKnown RBP6.8□□□□□ -1.32
MSP1YGR028W GEM1P39722 662 aa6.8□□□□□ -1.32
MSP1YGR028W SAH1P39954 449 aaKnown RBP6.8□□□□□ -1.32
MSP1YGR028W UTP8P53276 713 aaKnown RBP6.8□□□□□ -1.32
MSP1YGR028W SFB2P53953 876 aa6.8□□□□□ -1.32
MSP1YGR028W GPM2Q12008 311 aa6.8□□□□□ -1.32
MSP1YGR028W TAF10Q12030 206 aa6.8□□□□□ -1.32
MSP1YGR028W HIS5P07172 385 aa6.79□□□□□ -1.32
MSP1YGR028W TKL2P33315 681 aa6.79□□□□□ -1.32
MSP1YGR028W YKL107WP34251 309 aa6.79□□□□□ -1.32
MSP1YGR028W RPC25P35718 212 aa6.79□□□□□ -1.32
MSP1YGR028W SHE3P38272 425 aaKnown RBP6.79□□□□□ -1.32
MSP1YGR028W SFB3P38810 929 aa6.79□□□□□ -1.32
MSP1YGR028W KAP123P40069 1113 aaKnown RBP6.79□□□□□ -1.32
MSP1YGR028W ZAP1P47043 880 aa6.79□□□□□ -1.32
MSP1YGR028W CPR7P47103 393 aa6.79□□□□□ -1.32
MSP1YGR028W VPS25P47142 202 aa6.79□□□□□ -1.32
MSP1YGR028W GCN5Q03330 439 aa6.79□□□□□ -1.32
MSP1YGR028W YPQ1Q12010 308 aa6.79□□□□□ -1.32
MSP1YGR028W GIS3Q12418 502 aa6.79□□□□□ -1.32
MSP1YGR028W SPS1P08458 490 aa6.78□□□□□ -1.32
MSP1YGR028W CDC42P19073 191 aa6.78□□□□□ -1.32
MSP1YGR028W RNR1P21524 888 aaKnown RBP6.78□□□□□ -1.32
MSP1YGR028W STE11P23561 717 aa6.78□□□□□ -1.32
MSP1YGR028W AGP1P25376 633 aa6.78□□□□□ -1.32
MSP1YGR028W SBA1P28707 216 aaKnown RBP6.78□□□□□ -1.32
MSP1YGR028W ELM1P32801 640 aa6.78□□□□□ -1.32
MSP1YGR028W AIM26P32858 118 aa6.78□□□□□ -1.32
MSP1YGR028W POL12P38121 705 aaPredicted RBP6.78□□□□□ -1.32
MSP1YGR028W VAC8P39968 578 aa6.78□□□□□ -1.32
MSP1YGR028W DJP1P40564 432 aa6.78□□□□□ -1.32
MSP1YGR028W HYR1P40581 163 aaKnown RBP6.78□□□□□ -1.32
MSP1YGR028W AIP1P46680 615 aaKnown RBP6.78□□□□□ -1.32
MSP1YGR028W YJR054WP47114 497 aa6.78□□□□□ -1.32
MSP1YGR028W RPA49Q01080 415 aaPredicted RBP6.78□□□□□ -1.32
MSP1YGR028W TMN2Q04562 672 aa6.78□□□□□ -1.32
MSP1YGR028W RCL1Q08096 367 aaPredicted RBP6.78□□□□□ -1.32
MSP1YGR028W YAP7Q08182 245 aa6.78□□□□□ -1.32
MSP1YGR028W PDH1Q12428 516 aaKnown RBP6.78□□□□□ -1.32
MSP1YGR028W DFG16Q99234 619 aa6.78□□□□□ -1.32
MSP1YGR028W CAN1P04817 590 aa6.77□□□□□ -1.33
MSP1YGR028W RPL22AP05749 121 aaKnown RBP6.77□□□□□ -1.33
MSP1YGR028W SAT4P25333 603 aaKnown RBP6.77□□□□□ -1.33
MSP1YGR028W RAD16P31244 790 aa6.77□□□□□ -1.33
MSP1YGR028W SEA4P38164 1038 aa6.77□□□□□ -1.33
MSP1YGR028W BCD1P38772 366 aa6.77□□□□□ -1.33
MSP1YGR028W SEC26P41810 973 aaKnown RBP6.77□□□□□ -1.33
MSP1YGR028W CIR1P42940 261 aa6.77□□□□□ -1.33
Retrieved 100 of 5,963 RNA–protein pairs in 134.8 ms