RNA–Protein interactions for RNA: YGL090W

LIF1, Transcript of Component of the DNA ligase IV complex, yeastyeast

Gene LIF1, Length 1,266 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
LIF1YGL090W MTR3P48240 250 aaPredicted RBP3.57□□□□□ -1.84
LIF1YGL090W VTC3Q02725 835 aa3.57□□□□□ -1.84
LIF1YGL090W HOT1Q03213 719 aa3.57□□□□□ -1.84
LIF1YGL090W HLR1Q04429 423 aa3.57□□□□□ -1.84
LIF1YGL090W GAD1Q04792 585 aa3.57□□□□□ -1.84
LIF1YGL090W DBP9Q06218 594 aaKnown RBP3.57□□□□□ -1.84
LIF1YGL090W THI21Q08975 551 aa3.57□□□□□ -1.84
LIF1YGL090W APL4Q12028 832 aa3.57□□□□□ -1.84
LIF1YGL090W YOL114CQ12322 202 aa3.57□□□□□ -1.84
LIF1YGL090W APM4Q99186 491 aa3.57□□□□□ -1.84
LIF1YGL090W REV3P14284 1504 aa3.56□□□□□ -1.84
LIF1YGL090W MTF2P10849 440 aa3.56□□□□□ -1.84
LIF1YGL090W RAD18P10862 487 aa3.56□□□□□ -1.84
LIF1YGL090W SPB1P25582 841 aaPredicted RBP3.56□□□□□ -1.84
LIF1YGL090W MSH1P25846 959 aa3.56□□□□□ -1.84
LIF1YGL090W DPH2P32461 534 aa3.56□□□□□ -1.84
LIF1YGL090W TMT1P32643 299 aa3.56□□□□□ -1.84
LIF1YGL090W ORC2P32833 620 aa3.56□□□□□ -1.84
LIF1YGL090W RIB7P33312 244 aa3.56□□□□□ -1.84
LIF1YGL090W SLC1P33333 303 aa3.56□□□□□ -1.84
LIF1YGL090W BYE1P36106 594 aa3.56□□□□□ -1.84
LIF1YGL090W ESL2P36168 1195 aa3.56□□□□□ -1.84
LIF1YGL090W HSM3P38348 480 aa3.56□□□□□ -1.84
LIF1YGL090W PCM1P38628 557 aaKnown RBP3.56□□□□□ -1.84
LIF1YGL090W VPS45P38932 577 aa3.56□□□□□ -1.84
LIF1YGL090W FMP52P40008 231 aa3.56□□□□□ -1.84
LIF1YGL090W TPA1P40032 644 aaKnown RBP3.56□□□□□ -1.84
LIF1YGL090W LSM5P40089 93 aaKnown RBP3.56□□□□□ -1.84
LIF1YGL090W CCT5P40413 562 aaKnown RBP3.56□□□□□ -1.84
LIF1YGL090W SHR5P41912 237 aa3.56□□□□□ -1.84
LIF1YGL090W CIR1P42940 261 aa3.56□□□□□ -1.84
LIF1YGL090W CCT7P42943 550 aaKnown RBP3.56□□□□□ -1.84
LIF1YGL090W YGR153WP48238 217 aa3.56□□□□□ -1.84
LIF1YGL090W PCL10P53124 433 aa3.56□□□□□ -1.84
LIF1YGL090W TEX1P53851 422 aaKnown RBP3.56□□□□□ -1.84
LIF1YGL090W TIM10P87108 93 aa3.56□□□□□ -1.84
LIF1YGL090W YML119WQ03208 357 aa3.56□□□□□ -1.84
LIF1YGL090W MGR3Q04472 501 aa3.56□□□□□ -1.84
LIF1YGL090W CUE5Q08412 411 aaKnown RBP3.56□□□□□ -1.84
LIF1YGL090W SGO1Q08490 590 aa3.56□□□□□ -1.84
LIF1YGL090W MET7Q08645 548 aa3.56□□□□□ -1.84
LIF1YGL090W REX3Q12090 404 aa3.56□□□□□ -1.84
LIF1YGL090W RUD3Q12234 484 aaKnown RBP3.56□□□□□ -1.84
LIF1YGL090W ARP7Q12406 477 aa3.56□□□□□ -1.84
LIF1YGL090W PGA3Q12746 312 aaKnown RBP3.56□□□□□ -1.84
LIF1YGL090W YBR182C-AQ8TGU6 64 aa3.56□□□□□ -1.84
LIF1YGL090W PFK2P16862 959 aaKnown RBP RIP-Chip data3.55□□□□□ -1.84not detected
LIF1YGL090W HOP1P20050 605 aa3.55□□□□□ -1.84
LIF1YGL090W HCA4P20448 770 aaKnown RBP3.55□□□□□ -1.84
LIF1YGL090W PRP28P23394 588 aa3.55□□□□□ -1.84
LIF1YGL090W YCL049CP25577 312 aa3.55□□□□□ -1.84
LIF1YGL090W ILV6P25605 309 aaKnown RBP3.55□□□□□ -1.84
LIF1YGL090W SAC6P32599 642 aaKnown RBP3.55□□□□□ -1.84
LIF1YGL090W MDL1P33310 695 aa3.55□□□□□ -1.84
LIF1YGL090W MUD2P36084 527 aaKnown RBP3.55□□□□□ -1.84
LIF1YGL090W SIC1P38634 284 aa3.55□□□□□ -1.84
LIF1YGL090W OTU2P38747 307 aaKnown RBP3.55□□□□□ -1.84
LIF1YGL090W PPE1P38796 400 aa3.55□□□□□ -1.84
LIF1YGL090W TIF4631P39935 952 aaKnown RBP3.55□□□□□ -1.84
LIF1YGL090W KHA1P40309 873 aa3.55□□□□□ -1.84
LIF1YGL090W YJL068CP40363 299 aa3.55□□□□□ -1.84
LIF1YGL090W SEC28P40509 296 aaKnown RBP3.55□□□□□ -1.84
LIF1YGL090W ARF3P40994 183 aaRIP-Chip data3.55□□□□□ -1.84not detected
LIF1YGL090W SMK1P41808 388 aa3.55□□□□□ -1.84
LIF1YGL090W GCD10P41814 478 aa3.55□□□□□ -1.84
LIF1YGL090W CAF16P43569 289 aa3.55□□□□□ -1.84
LIF1YGL090W FYV8P46949 817 aaKnown RBP3.55□□□□□ -1.84
LIF1YGL090W UBC11P52492 156 aa3.55□□□□□ -1.84
LIF1YGL090W DAM1P53267 343 aa3.55□□□□□ -1.84
LIF1YGL090W TEP1P53916 434 aa3.55□□□□□ -1.84
LIF1YGL090W ERV25P54837 211 aaKnown RBP3.55□□□□□ -1.84
LIF1YGL090W SEC5P89102 971 aa3.55□□□□□ -1.84
LIF1YGL090W PEX25Q02969 394 aa3.55□□□□□ -1.84
LIF1YGL090W FDC1Q03034 503 aa3.55□□□□□ -1.84
LIF1YGL090W PRP42Q03776 544 aaKnown RBP3.55□□□□□ -1.84
LIF1YGL090W YDR514CQ04408 483 aa3.55□□□□□ -1.84
LIF1YGL090W UTP21Q06078 939 aaPredicted RBP3.55□□□□□ -1.84
LIF1YGL090W RVB2Q12464 471 aaKnown RBP3.55□□□□□ -1.84
LIF1YGL090W RPB2P08518 1224 aaKnown RBP3.54□□□□□ -1.84
LIF1YGL090W CDC16P09798 840 aa3.54□□□□□ -1.84
LIF1YGL090W CKA1P15790 372 aa3.54□□□□□ -1.84
LIF1YGL090W HNM1P19807 563 aa3.54□□□□□ -1.84
LIF1YGL090W ERG3P32353 365 aa3.54□□□□□ -1.84
LIF1YGL090W CBF2P32504 956 aa3.54□□□□□ -1.84
LIF1YGL090W SSE1P32589 693 aaKnown RBP3.54□□□□□ -1.84
LIF1YGL090W TFB1P32776 642 aa3.54□□□□□ -1.84
LIF1YGL090W ARC19P33204 171 aaKnown RBP3.54□□□□□ -1.84
LIF1YGL090W SWH1P35845 1188 aa3.54□□□□□ -1.84
LIF1YGL090W MCD4P36051 919 aa3.54□□□□□ -1.84
LIF1YGL090W TIF5P38431 405 aaKnown RBP3.54□□□□□ -1.84
LIF1YGL090W FUN12P39730 1002 aaKnown RBP3.54□□□□□ -1.84
LIF1YGL090W RLP7P40693 322 aaKnown RBP3.54□□□□□ -1.84
LIF1YGL090W BUD27P43573 796 aaKnown RBP RIP-Chip data3.54□□□□□ -1.84not detected
LIF1YGL090W RMD8P43620 662 aa3.54□□□□□ -1.84
LIF1YGL090W HXT16P47185 567 aa3.54□□□□□ -1.84
LIF1YGL090W PUS4P48567 403 aaKnown RBP3.54□□□□□ -1.84
LIF1YGL090W TEL2P53038 688 aa3.54□□□□□ -1.84
LIF1YGL090W AIM14P53109 570 aa3.54□□□□□ -1.84
LIF1YGL090W ARC35P53731 342 aaKnown RBP3.54□□□□□ -1.84
LIF1YGL090W SSL2Q00578 843 aa3.54□□□□□ -1.84
Retrieved 100 of 5,963 RNA–protein pairs in 22.8 ms