RNA–Protein interactions for RNA: YFL003C

MSH4, Transcript of Protein involved in meiotic recombination, yeastyeast

Gene MSH4, Length 2,637 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MSH4YFL003C BET2P20133 325 aa3.39□□□□□ -1.87
MSH4YFL003C XRS2P33301 854 aa3.39□□□□□ -1.87
MSH4YFL003C SIP4P46954 829 aa3.39□□□□□ -1.87
MSH4YFL003C MCM6P53091 1017 aaKnown RBP3.39□□□□□ -1.87
MSH4YFL003C SPO1P53541 631 aa3.39□□□□□ -1.87
MSH4YFL003C RPS9BP05755 195 aaKnown RBP3.39□□□□□ -1.87
MSH4YFL003C PRP22P24384 1145 aaKnown RBP3.39□□□□□ -1.87
MSH4YFL003C MRN1Q08925 612 aaKnown RBP RIP-Chip data3.39□□□□□ -1.87not detected
MSH4YFL003C HOS1Q12214 470 aa3.39□□□□□ -1.87
MSH4YFL003C PCK1P10963 549 aa3.38□□□□□ -1.87
MSH4YFL003C DEF1P35732 738 aaKnown RBP3.38□□□□□ -1.87
MSH4YFL003C ESL2P36168 1195 aa3.38□□□□□ -1.87
MSH4YFL003C NDE1P40215 560 aa3.38□□□□□ -1.87
MSH4YFL003C MNN10P50108 393 aaKnown RBP3.38□□□□□ -1.87
MSH4YFL003C PSP1P50896 841 aaKnown RBP3.38□□□□□ -1.87
MSH4YFL003C EFR3Q03653 782 aaKnown RBP3.38□□□□□ -1.87
MSH4YFL003C PPN1Q04119 674 aa3.38□□□□□ -1.87
MSH4YFL003C FRE5Q08908 694 aa3.38□□□□□ -1.87
MSH4YFL003C YKL033W-AQ86ZR7 236 aa3.38□□□□□ -1.87
MSH4YFL003C YOR093CQ12275 1648 aa3.38□□□□□ -1.87
MSH4YFL003C NUC1P08466 329 aa3.38□□□□□ -1.87
MSH4YFL003C CAF20P12962 161 aaKnown RBP3.38□□□□□ -1.87
MSH4YFL003C AAC3P18238 307 aa3.38□□□□□ -1.87
MSH4YFL003C MVD1P32377 396 aaKnown RBP3.38□□□□□ -1.87
MSH4YFL003C VPS8P39702 1274 aa3.38□□□□□ -1.87
MSH4YFL003C SQS1P53866 767 aaKnown RBP3.38□□□□□ -1.87
MSH4YFL003C DLT1Q04216 342 aa3.38□□□□□ -1.87
MSH4YFL003C STP3Q05937 343 aa3.38□□□□□ -1.87
MSH4YFL003C ZRT2Q12436 422 aa3.38□□□□□ -1.87
MSH4YFL003C ERG4P25340 473 aa3.37□□□□□ -1.87
MSH4YFL003C RPS7AP26786 190 aaKnown RBP3.37□□□□□ -1.87
MSH4YFL003C CHS3P29465 1165 aa3.37□□□□□ -1.87
MSH4YFL003C APT2P36973 181 aa3.37□□□□□ -1.87
MSH4YFL003C ESL1P40456 1118 aa3.37□□□□□ -1.87
MSH4YFL003C IML2P47031 731 aa3.37□□□□□ -1.87
MSH4YFL003C CLU1Q03690 1277 aaKnown RBP3.37□□□□□ -1.87
MSH4YFL003C ARA2Q04212 335 aa3.37□□□□□ -1.87
MSH4YFL003C SNO4Q04902 237 aa3.37□□□□□ -1.87
MSH4YFL003C OPY2Q06810 360 aa3.37□□□□□ -1.87
MSH4YFL003C HSP33Q08914 237 aaKnown RBP3.37□□□□□ -1.87
MSH4YFL003C HSP32Q08992 237 aa3.37□□□□□ -1.87
MSH4YFL003C DNF2Q12675 1612 aa3.37□□□□□ -1.87
MSH4YFL003C PRP28P23394 588 aa3.37□□□□□ -1.87
MSH4YFL003C CTP1P38152 299 aa3.37□□□□□ -1.87
MSH4YFL003C RKM3P38222 552 aa3.37□□□□□ -1.87
MSH4YFL003C RIC1P40395 1056 aa3.37□□□□□ -1.87
MSH4YFL003C SRB7P47822 140 aa3.37□□□□□ -1.87
MSH4YFL003C ARE2P53629 642 aaKnown RBP3.37□□□□□ -1.87
MSH4YFL003C YNL092WP53934 400 aa3.37□□□□□ -1.87
MSH4YFL003C KIN4Q01919 800 aa3.37□□□□□ -1.87
MSH4YFL003C VAM6Q07468 1049 aa3.37□□□□□ -1.87
MSH4YFL003C YOR352WQ08816 343 aa3.37□□□□□ -1.87
MSH4YFL003C PRS5Q12265 496 aaKnown RBP3.37□□□□□ -1.87
MSH4YFL003C MED1Q12321 566 aa3.37□□□□□ -1.87
MSH4YFL003C RVB2Q12464 471 aaKnown RBP3.37□□□□□ -1.87
MSH4YFL003C FOB1O13329 566 aa3.36□□□□□ -1.87
MSH4YFL003C INH1P01097 85 aa3.36□□□□□ -1.87
MSH4YFL003C CDC31P06704 161 aaKnown RBP3.36□□□□□ -1.87
MSH4YFL003C STE4P18851 423 aa3.36□□□□□ -1.87
MSH4YFL003C EFT1P32324 842 aaKnown RBP3.36□□□□□ -1.87
MSH4YFL003C ELM1P32801 640 aa3.36□□□□□ -1.87
MSH4YFL003C ELF1P36053 145 aa3.36□□□□□ -1.87
MSH4YFL003C JNM1P36224 373 aa3.36□□□□□ -1.87
MSH4YFL003C FMP52P40008 231 aa3.36□□□□□ -1.87
MSH4YFL003C VFA1P40080 203 aa3.36□□□□□ -1.87
MSH4YFL003C CSR1Q06705 408 aaKnown RBP3.36□□□□□ -1.87
MSH4YFL003C DIA2Q08496 732 aaPredicted RBP3.36□□□□□ -1.87
MSH4YFL003C NTO1Q12311 748 aa3.36□□□□□ -1.87
MSH4YFL003C YLR358CO13565 187 aa3.36□□□□□ -1.87
MSH4YFL003C RER1P25560 188 aa3.36□□□□□ -1.87
MSH4YFL003C TAF5P38129 798 aa3.36□□□□□ -1.87
MSH4YFL003C PPS1P38148 807 aa3.36□□□□□ -1.87
MSH4YFL003C PSF2P40359 213 aa3.36□□□□□ -1.87
MSH4YFL003C HOF1Q05080 669 aa3.36□□□□□ -1.87
MSH4YFL003C SSM4P40318 1319 aa3.36□□□□□ -1.87
MSH4YFL003C TAF2P23255 1407 aa3.36□□□□□ -1.87
MSH4YFL003C MMS1Q06211 1407 aa3.36□□□□□ -1.87
MSH4YFL003C SIN3P22579 1536 aa3.35□□□□□ -1.87
MSH4YFL003C ALG7P07286 448 aa3.35□□□□□ -1.87
MSH4YFL003C RPL19AP0CX82 189 aaKnown RBP3.35□□□□□ -1.87
MSH4YFL003C RPL19BP0CX83 189 aaPredicted RBP3.35□□□□□ -1.87
MSH4YFL003C CTS1P29029 562 aa3.35□□□□□ -1.87
MSH4YFL003C PAH1P32567 862 aa3.35□□□□□ -1.87
MSH4YFL003C ARO9P38840 513 aaPredicted RBP3.35□□□□□ -1.87
MSH4YFL003C SLI1P53304 468 aa3.35□□□□□ -1.87
MSH4YFL003C CSL4P53859 292 aaPredicted RBP3.35□□□□□ -1.87
MSH4YFL003C LEU2P04173 364 aaPredicted RBP3.35□□□□□ -1.87
MSH4YFL003C MIS1P09440 975 aaKnown RBP3.35□□□□□ -1.87
MSH4YFL003C NPR3P38742 1146 aa3.35□□□□□ -1.87
MSH4YFL003C YJL193WP39542 402 aa3.35□□□□□ -1.87
MSH4YFL003C NOP16P40007 231 aaKnown RBP3.35□□□□□ -1.87
MSH4YFL003C IMO32P53219 342 aa3.35□□□□□ -1.87
MSH4YFL003C MDR1P53258 950 aa3.35□□□□□ -1.87
MSH4YFL003C TSR2Q06672 205 aaKnown RBP3.35□□□□□ -1.87
MSH4YFL003C USV1Q12132 391 aa3.35□□□□□ -1.87
MSH4YFL003C TUF1P02992 437 aaKnown RBP3.34□□□□□ -1.87
MSH4YFL003C RPB2P08518 1224 aaKnown RBP3.34□□□□□ -1.87
MSH4YFL003C YCR061WP25639 631 aa3.34□□□□□ -1.87
MSH4YFL003C YEL025CP39991 1188 aa3.34□□□□□ -1.87
MSH4YFL003C TMA108P40462 946 aa3.34□□□□□ -1.87
Retrieved 100 of 5,963 RNA–protein pairs in 14.1 ms