RNA–Protein interactions for RNA: YER116C

SLX8, Transcript of Subunit of Slx5-Slx8 SUMO-targeted ubiquitin ligase (STUbL) complex, yeast

Gene SLX8, Length 825 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SLX8	YER116C	TSL1	P38427	1098 aa	Known RBP	4.29	□□□□□ -1.72
SLX8	YER116C	YHR097C	P38809	366 aa	Known RBP	4.29	□□□□□ -1.72
SLX8	YER116C	NAS2	P40555	220 aa		4.29	□□□□□ -1.72
SLX8	YER116C	FET4	P40988	552 aa		4.29	□□□□□ -1.72
SLX8	YER116C	FET5	P43561	622 aa		4.29	□□□□□ -1.72
SLX8	YER116C	STU2	P46675	888 aa		4.29	□□□□□ -1.72
SLX8	YER116C	NCS6	P53088	359 aa		4.29	□□□□□ -1.72
SLX8	YER116C	CUL3	P53202	744 aa		4.29	□□□□□ -1.72
SLX8	YER116C	SNF12	P53628	566 aa		4.29	□□□□□ -1.72
SLX8	YER116C	YSA1	Q01976	231 aa		4.29	□□□□□ -1.72
SLX8	YER116C	YPL034W	Q03083	165 aa		4.29	□□□□□ -1.72
SLX8	YER116C	ATG38	Q05789	226 aa	Known RBP	4.29	□□□□□ -1.72
SLX8	YER116C	CTI6	Q08923	506 aa		4.29	□□□□□ -1.72
SLX8	YER116C	SLP1	Q12232	587 aa		4.29	□□□□□ -1.72
SLX8	YER116C	PSY3	Q12318	242 aa		4.29	□□□□□ -1.72
SLX8	YER116C	GPM3	Q12326	303 aa		4.29	□□□□□ -1.72
SLX8	YER116C	SKS1	Q12505	502 aa		4.29	□□□□□ -1.72
SLX8	YER116C	ADE3	P07245	946 aa	Known RBP	4.28	□□□□□ -1.72
SLX8	YER116C	CDC24	P11433	854 aa	Predicted RBP	4.28	□□□□□ -1.72
SLX8	YER116C	STE12	P13574	688 aa		4.28	□□□□□ -1.72
SLX8	YER116C	MDH1	P17505	334 aa	Known RBP RIP-Chip data	4.28	□□□□□ -1.72	not detected
SLX8	YER116C	RIT1	P23796	513 aa		4.28	□□□□□ -1.72
SLX8	YER116C	EFT1	P32324	842 aa	Known RBP	4.28	□□□□□ -1.72
SLX8	YER116C	CTF13	P35203	478 aa		4.28	□□□□□ -1.72
SLX8	YER116C	TFA2	P36145	328 aa		4.28	□□□□□ -1.72
SLX8	YER116C	CCL1	P37366	393 aa		4.28	□□□□□ -1.72
SLX8	YER116C	SMC2	P38989	1170 aa	Known RBP	4.28	□□□□□ -1.72
SLX8	YER116C	NEO1	P40527	1151 aa		4.28	□□□□□ -1.72
SLX8	YER116C	BUD27	P43573	796 aa	Known RBP RIP-Chip data	4.28	□□□□□ -1.72	not detected
SLX8	YER116C	SIP4	P46954	829 aa		4.28	□□□□□ -1.72
SLX8	YER116C	RAD17	P48581	401 aa		4.28	□□□□□ -1.72
SLX8	YER116C	NOP15	P53927	220 aa	Predicted RBP	4.28	□□□□□ -1.72
SLX8	YER116C	DAK1	P54838	584 aa	Known RBP	4.28	□□□□□ -1.72
SLX8	YER116C	GTB1	Q04924	702 aa		4.28	□□□□□ -1.72
SLX8	YER116C	DON1	Q05610	365 aa		4.28	□□□□□ -1.72
SLX8	YER116C	FMP45	Q07651	309 aa		4.28	□□□□□ -1.72
SLX8	YER116C	ENT4	Q07872	247 aa		4.28	□□□□□ -1.72
SLX8	YER116C	PML1	Q07930	204 aa	Predicted RBP	4.28	□□□□□ -1.72
SLX8	YER116C	MCA1	Q08601	432 aa		4.28	□□□□□ -1.72
SLX8	YER116C	YPL277C	Q08989	487 aa		4.28	□□□□□ -1.72
SLX8	YER116C	SPE3	Q12074	293 aa	Known RBP	4.28	□□□□□ -1.72
SLX8	YER116C	COX17	Q12287	69 aa		4.28	□□□□□ -1.72
SLX8	YER116C	SEC39	Q12745	709 aa		4.28	□□□□□ -1.72
SLX8	YER116C	YBR182C-A	Q8TGU6	64 aa		4.28	□□□□□ -1.72
SLX8	YER116C	YLR302C	O13544	120 aa		4.27	□□□□□ -1.73
SLX8	YER116C	AI3	P03877	415 aa		4.27	□□□□□ -1.73
SLX8	YER116C	ACO1	P19414	778 aa	Known RBP RIP-Chip data	4.27	□□□□□ -1.73	not detected
SLX8	YER116C	NAR1	P23503	491 aa	Known RBP	4.27	□□□□□ -1.73
SLX8	YER116C	CLB3	P24870	427 aa		4.27	□□□□□ -1.73
SLX8	YER116C	NTG1	P31378	399 aa		4.27	□□□□□ -1.73
SLX8	YER116C	SAP190	P36123	1033 aa		4.27	□□□□□ -1.73
SLX8	YER116C	PIM1	P36775	1133 aa		4.27	□□□□□ -1.73
SLX8	YER116C	POL12	P38121	705 aa	Predicted RBP	4.27	□□□□□ -1.73
SLX8	YER116C	SRO77	P38163	1010 aa		4.27	□□□□□ -1.73
SLX8	YER116C	MUP3	P38734	546 aa		4.27	□□□□□ -1.73
SLX8	YER116C	LYS9	P38999	446 aa		4.27	□□□□□ -1.73
SLX8	YER116C	GPB2	P39717	880 aa		4.27	□□□□□ -1.73
SLX8	YER116C	YER034W	P40022	185 aa	Known RBP	4.27	□□□□□ -1.73
SLX8	YER116C	YER156C	P40093	338 aa	Known RBP	4.27	□□□□□ -1.73
SLX8	YER116C	YER158C	P40095	573 aa		4.27	□□□□□ -1.73
SLX8	YER116C	INP51	P40559	946 aa	Known RBP	4.27	□□□□□ -1.73
SLX8	YER116C	MET12	P46151	657 aa		4.27	□□□□□ -1.73
SLX8	YER116C	PRY1	P47032	299 aa		4.27	□□□□□ -1.73
SLX8	YER116C	BPL1	P48445	690 aa	Predicted RBP	4.27	□□□□□ -1.73
SLX8	YER116C	BUD9	P53226	547 aa		4.27	□□□□□ -1.73
SLX8	YER116C	LSB1	P53281	241 aa		4.27	□□□□□ -1.73
SLX8	YER116C	YGR266W	P53326	701 aa		4.27	□□□□□ -1.73
SLX8	YER116C	NOG2	P53742	486 aa	Known RBP	4.27	□□□□□ -1.73
SLX8	YER116C	YNR065C	P53751	1116 aa		4.27	□□□□□ -1.73
SLX8	YER116C	PRO2	P54885	456 aa	Known RBP	4.27	□□□□□ -1.73
SLX8	YER116C	TOF2	Q02208	771 aa		4.27	□□□□□ -1.73
SLX8	YER116C	NGL3	Q03210	505 aa		4.27	□□□□□ -1.73
SLX8	YER116C	RSB1	Q08417	382 aa		4.27	□□□□□ -1.73
SLX8	YER116C	YOR059C	Q08448	450 aa	Known RBP	4.27	□□□□□ -1.73
SLX8	YER116C	RCN2	Q12044	265 aa		4.27	□□□□□ -1.73
SLX8	YER116C	RTC5	Q12108	567 aa	Known RBP	4.27	□□□□□ -1.73
SLX8	YER116C	GRX6	Q12438	231 aa		4.27	□□□□□ -1.73
SLX8	YER116C	YLR149C	Q99296	730 aa		4.27	□□□□□ -1.73
SLX8	YER116C	RPS17A	P02407	136 aa	Known RBP	4.26	□□□□□ -1.73
SLX8	YER116C	YML002W	P0CF17	737 aa		4.26	□□□□□ -1.73
SLX8	YER116C	CBS1	P14066	229 aa		4.26	□□□□□ -1.73
SLX8	YER116C	RPS17B	P14127	136 aa	Known RBP	4.26	□□□□□ -1.73
SLX8	YER116C	RPB4	P20433	221 aa	Predicted RBP	4.26	□□□□□ -1.73
SLX8	YER116C	PWP1	P21304	576 aa	Known RBP	4.26	□□□□□ -1.73
SLX8	YER116C	RFA1	P22336	621 aa	Known RBP	4.26	□□□□□ -1.73
SLX8	YER116C	YCK1	P23291	538 aa		4.26	□□□□□ -1.73
SLX8	YER116C	PRE8	P23639	250 aa		4.26	□□□□□ -1.73
SLX8	YER116C	YEL043W	P32618	956 aa		4.26	□□□□□ -1.73
SLX8	YER116C	SFA1	P32771	386 aa		4.26	□□□□□ -1.73
SLX8	YER116C	ARC19	P33204	171 aa	Known RBP	4.26	□□□□□ -1.73
SLX8	YER116C	COY1	P34237	679 aa		4.26	□□□□□ -1.73
SLX8	YER116C	YUH1	P35127	236 aa		4.26	□□□□□ -1.73
SLX8	YER116C	SKI2	P35207	1287 aa	Known RBP RIP-Chip data	4.26	□□□□□ -1.73	not detected
SLX8	YER116C	YKR018C	P36114	725 aa		4.26	□□□□□ -1.73
SLX8	YER116C	ADH5	P38113	351 aa	Known RBP	4.26	□□□□□ -1.73
SLX8	YER116C	YBL029W	P38201	376 aa		4.26	□□□□□ -1.73
SLX8	YER116C	YHR054C	P38780	354 aa		4.26	□□□□□ -1.73
SLX8	YER116C	YAR028W	P39548	234 aa		4.26	□□□□□ -1.73
SLX8	YER116C	NPP2	P39997	493 aa		4.26	□□□□□ -1.73
SLX8	YER116C	PFK26	P40433	827 aa	Known RBP	4.26	□□□□□ -1.73

Retrieved 100 of 5,963 RNA–protein pairs in 25.8 ms