RNA–Protein interactions for RNA: YER003C

PMI40, Transcript of Mannose-6-phosphate isomerase, yeast

Gene PMI40, Length 1,290 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PMI40	YER003C	EFT1	P32324	842 aa	Known RBP	3.93	□□□□□ -1.78
PMI40	YER003C	DEF1	P35732	738 aa	Known RBP	3.93	□□□□□ -1.78
PMI40	YER003C	SET3	P36124	751 aa		3.93	□□□□□ -1.78
PMI40	YER003C	YBR053C	P38235	358 aa		3.93	□□□□□ -1.78
PMI40	YER003C	EHT1	P38295	451 aa		3.93	□□□□□ -1.78
PMI40	YER003C	RIC1	P40395	1056 aa		3.93	□□□□□ -1.78
PMI40	YER003C	UPF3	P48412	387 aa	Known RBP	3.93	□□□□□ -1.78
PMI40	YER003C	PSP1	P50896	841 aa	Known RBP	3.93	□□□□□ -1.78
PMI40	YER003C	PHO23	P50947	330 aa		3.93	□□□□□ -1.78
PMI40	YER003C	UBC11	P52492	156 aa		3.93	□□□□□ -1.78
PMI40	YER003C	GSF2	Q04697	403 aa	Known RBP	3.93	□□□□□ -1.78
PMI40	YER003C	ARR3	Q06598	404 aa		3.93	□□□□□ -1.78
PMI40	YER003C	AIM6	Q07716	390 aa		3.93	□□□□□ -1.78
PMI40	YER003C	CHS5	Q12114	671 aa	Known RBP	3.93	□□□□□ -1.78
PMI40	YER003C	FOB1	O13329	566 aa		3.92	□□□□□ -1.78
PMI40	YER003C	CDC16	P09798	840 aa		3.92	□□□□□ -1.78
PMI40	YER003C	HRR25	P29295	494 aa	Known RBP	3.92	□□□□□ -1.78
PMI40	YER003C	MVD1	P32377	396 aa	Known RBP	3.92	□□□□□ -1.78
PMI40	YER003C	CNS1	P33313	385 aa		3.92	□□□□□ -1.78
PMI40	YER003C	YEL068C	P39977	110 aa		3.92	□□□□□ -1.78
PMI40	YER003C	YEL025C	P39991	1188 aa		3.92	□□□□□ -1.78
PMI40	YER003C	TMN3	P40071	706 aa		3.92	□□□□□ -1.78
PMI40	YER003C	ELO3	P40319	345 aa		3.92	□□□□□ -1.78
PMI40	YER003C	RFX1	P48743	811 aa		3.92	□□□□□ -1.78
PMI40	YER003C	COS12	P53053	380 aa		3.92	□□□□□ -1.78
PMI40	YER003C	SPC19	Q03954	165 aa		3.92	□□□□□ -1.78
PMI40	YER003C	SNO4	Q04902	237 aa		3.92	□□□□□ -1.78
PMI40	YER003C	HSP33	Q08914	237 aa	Known RBP	3.92	□□□□□ -1.78
PMI40	YER003C	HSP32	Q08992	237 aa		3.92	□□□□□ -1.78
PMI40	YER003C	ICL2	Q12031	575 aa		3.92	□□□□□ -1.78
PMI40	YER003C	ZRT2	Q12436	422 aa		3.92	□□□□□ -1.78
PMI40	YER003C	ERP4	Q12450	207 aa		3.92	□□□□□ -1.78
PMI40	YER003C	TUB2	P02557	457 aa	Known RBP	3.91	□□□□□ -1.78
PMI40	YER003C	TPK1	P06244	397 aa		3.91	□□□□□ -1.78
PMI40	YER003C	SIR3	P06701	978 aa		3.91	□□□□□ -1.78
PMI40	YER003C	AAC3	P18238	307 aa		3.91	□□□□□ -1.78
PMI40	YER003C	VPS34	P22543	875 aa		3.91	□□□□□ -1.78
PMI40	YER003C	RPS7A	P26786	190 aa	Known RBP	3.91	□□□□□ -1.78
PMI40	YER003C	CMK1	P27466	446 aa	Known RBP	3.91	□□□□□ -1.78
PMI40	YER003C	SWC3	P31376	625 aa		3.91	□□□□□ -1.78
PMI40	YER003C	NTH1	P32356	751 aa		3.91	□□□□□ -1.78
PMI40	YER003C	MSS1	P32559	526 aa	Predicted RBP	3.91	□□□□□ -1.78
PMI40	YER003C	DSS4	P32601	143 aa		3.91	□□□□□ -1.78
PMI40	YER003C	NFU1	P32860	256 aa		3.91	□□□□□ -1.78
PMI40	YER003C	BCD1	P38772	366 aa		3.91	□□□□□ -1.78
PMI40	YER003C	REV7	P38927	245 aa		3.91	□□□□□ -1.78
PMI40	YER003C	BUL1	P48524	976 aa		3.91	□□□□□ -1.78
PMI40	YER003C	YGR054W	P53235	642 aa	Known RBP	3.91	□□□□□ -1.78
PMI40	YER003C	CSL4	P53859	292 aa	Predicted RBP	3.91	□□□□□ -1.78
PMI40	YER003C	TIM50	Q02776	476 aa		3.91	□□□□□ -1.78
PMI40	YER003C	YPL108W	Q02872	168 aa	Predicted RBP	3.91	□□□□□ -1.78
PMI40	YER003C	RGC1	Q06108	1083 aa	Known RBP	3.91	□□□□□ -1.78
PMI40	YER003C	COX17	Q12287	69 aa		3.91	□□□□□ -1.78
PMI40	YER003C	SUL2	Q12325	893 aa		3.91	□□□□□ -1.78
PMI40	YER003C	PET122	P10355	254 aa		3.9	□□□□□ -1.79
PMI40	YER003C	ERG4	P25340	473 aa		3.9	□□□□□ -1.79
PMI40	YER003C	DHR2	P36009	735 aa	Predicted RBP	3.9	□□□□□ -1.79
PMI40	YER003C	NOP4	P37838	685 aa	Known RBP	3.9	□□□□□ -1.79
PMI40	YER003C	STB5	P38699	743 aa		3.9	□□□□□ -1.79
PMI40	YER003C	IDS2	P46958	469 aa		3.9	□□□□□ -1.79
PMI40	YER003C	MPS3	P47069	682 aa		3.9	□□□□□ -1.79
PMI40	YER003C	RBG2	P53295	368 aa	Known RBP	3.9	□□□□□ -1.79
PMI40	YER003C	YKU80	Q04437	629 aa		3.9	□□□□□ -1.79
PMI40	YER003C	VAM6	Q07468	1049 aa		3.9	□□□□□ -1.79
PMI40	YER003C	IZH3	Q07959	543 aa		3.9	□□□□□ -1.79
PMI40	YER003C	NBP2	Q12163	236 aa		3.9	□□□□□ -1.79
PMI40	YER003C	YKL033W-A	Q86ZR7	236 aa		3.9	□□□□□ -1.79
PMI40	YER003C	CAP1	P28495	268 aa	Known RBP	3.89	□□□□□ -1.79
PMI40	YER003C	PRE2	P30656	287 aa	Known RBP	3.89	□□□□□ -1.79
PMI40	YER003C	NUP120	P35729	1037 aa		3.89	□□□□□ -1.79
PMI40	YER003C	CTP1	P38152	299 aa		3.89	□□□□□ -1.79
PMI40	YER003C	HRB1	P38922	454 aa	Known RBP RIP-Chip data	3.89	□□□□□ -1.79	not detected
PMI40	YER003C	KHA1	P40309	873 aa		3.89	□□□□□ -1.79
PMI40	YER003C	IST3	P40565	148 aa	Predicted RBP	3.89	□□□□□ -1.79
PMI40	YER003C	SIP4	P46954	829 aa		3.89	□□□□□ -1.79
PMI40	YER003C	YJL163C	P46996	555 aa		3.89	□□□□□ -1.79
PMI40	YER003C	SGM1	P47166	707 aa		3.89	□□□□□ -1.79
PMI40	YER003C	MSE1	P48525	536 aa		3.89	□□□□□ -1.79
PMI40	YER003C	PAN2	P53010	1115 aa	Predicted RBP	3.89	□□□□□ -1.79
PMI40	YER003C	FHN1	P53279	174 aa		3.89	□□□□□ -1.79
PMI40	YER003C	BSC5	P53755	489 aa		3.89	□□□□□ -1.79
PMI40	YER003C	RNT1	Q02555	471 aa		3.89	□□□□□ -1.79
PMI40	YER003C	IRC13	Q08630	104 aa		3.89	□□□□□ -1.79
PMI40	YER003C	PCD1	Q12524	340 aa		3.89	□□□□□ -1.79
PMI40	YER003C	ABF1	P14164	731 aa		3.88	□□□□□ -1.79
PMI40	YER003C	GCD7	P32502	381 aa	Predicted RBP	3.88	□□□□□ -1.79
PMI40	YER003C	HIS7	P33734	552 aa	Known RBP	3.88	□□□□□ -1.79
PMI40	YER003C	ESL2	P36168	1195 aa		3.88	□□□□□ -1.79
PMI40	YER003C	FMP52	P40008	231 aa		3.88	□□□□□ -1.79
PMI40	YER003C	ARB1	P40024	610 aa	Known RBP	3.88	□□□□□ -1.79
PMI40	YER003C	YJR061W	P40355	935 aa		3.88	□□□□□ -1.79
PMI40	YER003C	COG1	P53079	417 aa		3.88	□□□□□ -1.79
PMI40	YER003C	YAP1802	P53309	568 aa		3.88	□□□□□ -1.79
PMI40	YER003C	EFR3	Q03653	782 aa	Known RBP	3.88	□□□□□ -1.79
PMI40	YER003C	TDA9	Q04545	1251 aa		3.88	□□□□□ -1.79
PMI40	YER003C	RCO1	Q04779	684 aa		3.88	□□□□□ -1.79
PMI40	YER003C	FRE5	Q08908	694 aa		3.88	□□□□□ -1.79
PMI40	YER003C	TAH18	Q12181	623 aa		3.88	□□□□□ -1.79
PMI40	YER003C	RVB2	Q12464	471 aa	Known RBP	3.88	□□□□□ -1.79
PMI40	YER003C	SKM1	Q12469	655 aa		3.88	□□□□□ -1.79

Retrieved 100 of 5,963 RNA–protein pairs in 12.9 ms