RNA–Protein interactions for RNA: YDR539W

FDC1, Transcript of Putative phenylacrylic acid decarboxylase, yeast

Gene FDC1, Length 1,512 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
FDC1	YDR539W	RNR1	P21524	888 aa	Known RBP	4.86	□□□□□ -1.63
FDC1	YDR539W	RPL5	P26321	297 aa	Known RBP	4.86	□□□□□ -1.63
FDC1	YDR539W	KAR9	P32526	644 aa		4.86	□□□□□ -1.63
FDC1	YDR539W	RPC37	P36121	282 aa		4.86	□□□□□ -1.63
FDC1	YDR539W	SPT8	P38915	602 aa		4.86	□□□□□ -1.63
FDC1	YDR539W	GET2	P40056	285 aa		4.86	□□□□□ -1.63
FDC1	YDR539W	HMO1	Q03973	246 aa	Known RBP	4.86	□□□□□ -1.63
FDC1	YDR539W	KRS1	P15180	591 aa	Known RBP	4.85	□□□□□ -1.63
FDC1	YDR539W	CCR4	P31384	837 aa	Known RBP	4.85	□□□□□ -1.63
FDC1	YDR539W	ILM1	P47155	203 aa		4.85	□□□□□ -1.63
FDC1	YDR539W	COX18	P53239	316 aa		4.85	□□□□□ -1.63
FDC1	YDR539W	YAP1802	P53309	568 aa		4.85	□□□□□ -1.63
FDC1	YDR539W	ASI1	P54074	624 aa		4.85	□□□□□ -1.63
FDC1	YDR539W	SMX3	P54999	86 aa	Predicted RBP	4.85	□□□□□ -1.63
FDC1	YDR539W	REC102	Q02721	264 aa		4.85	□□□□□ -1.63
FDC1	YDR539W	KRE28	Q04431	385 aa		4.85	□□□□□ -1.63
FDC1	YDR539W	TSR1	Q07381	788 aa	Known RBP	4.85	□□□□□ -1.63
FDC1	YDR539W	SLX4	Q12098	748 aa		4.85	□□□□□ -1.63
FDC1	YDR539W	PDR18	P53756	1333 aa		4.84	□□□□□ -1.63
FDC1	YDR539W	PYC1	P11154	1178 aa	Known RBP	4.84	□□□□□ -1.63
FDC1	YDR539W	PRP16	P15938	1071 aa	Predicted RBP	4.84	□□□□□ -1.63
FDC1	YDR539W	KIN3	P22209	435 aa		4.84	□□□□□ -1.63
FDC1	YDR539W	CDC60	P26637	1090 aa	Known RBP	4.84	□□□□□ -1.63
FDC1	YDR539W	LHS1	P36016	881 aa		4.84	□□□□□ -1.63
FDC1	YDR539W	MUD2	P36084	527 aa	Known RBP	4.84	□□□□□ -1.63
FDC1	YDR539W	BRN1	P38170	754 aa		4.84	□□□□□ -1.63
FDC1	YDR539W	TDP1	P38319	544 aa		4.84	□□□□□ -1.63
FDC1	YDR539W	ERC1	P38767	581 aa		4.84	□□□□□ -1.63
FDC1	YDR539W	YNL195C	P40168	261 aa		4.84	□□□□□ -1.63
FDC1	YDR539W	GID8	P40208	455 aa		4.84	□□□□□ -1.63
FDC1	YDR539W	MET13	P53128	600 aa		4.84	□□□□□ -1.63
FDC1	YDR539W	ORM1	P53224	222 aa		4.84	□□□□□ -1.63
FDC1	YDR539W	BRE5	P53741	515 aa	Known RBP	4.84	□□□□□ -1.63
FDC1	YDR539W	EIS1	Q05050	843 aa	Known RBP	4.84	□□□□□ -1.63
FDC1	YDR539W	ECM3	Q99252	613 aa		4.84	□□□□□ -1.63
FDC1	YDR539W	SWI1	P09547	1314 aa		4.84	□□□□□ -1.64
FDC1	YDR539W	YIL177C	P40434	1758 aa		4.83	□□□□□ -1.64
FDC1	YDR539W	YJL225C	P40889	1758 aa		4.83	□□□□□ -1.64
FDC1	YDR539W	PMR1	P13586	950 aa		4.83	□□□□□ -1.64
FDC1	YDR539W	SEC66	P33754	206 aa		4.83	□□□□□ -1.64
FDC1	YDR539W	YSW1	P38280	609 aa		4.83	□□□□□ -1.64
FDC1	YDR539W	SHC1	P39000	512 aa		4.83	□□□□□ -1.64
FDC1	YDR539W	VPS8	P39702	1274 aa		4.83	□□□□□ -1.64
FDC1	YDR539W	CCT5	P40413	562 aa	Known RBP	4.83	□□□□□ -1.64
FDC1	YDR539W	YNL193W	P53870	558 aa		4.83	□□□□□ -1.64
FDC1	YDR539W	TIM11	P81449	96 aa	Predicted RBP	4.83	□□□□□ -1.64
FDC1	YDR539W	STE23	Q06010	1027 aa		4.83	□□□□□ -1.64
FDC1	YDR539W	NKP2	Q06162	153 aa		4.83	□□□□□ -1.64
FDC1	YDR539W	ATG26	Q06321	1198 aa		4.83	□□□□□ -1.64
FDC1	YDR539W	CHS5	Q12114	671 aa	Known RBP	4.83	□□□□□ -1.64
FDC1	YDR539W	MSL5	Q12186	476 aa	Known RBP RIP-Chip data	4.83	□□□□□ -1.64	not detected
FDC1	YDR539W	CDC43	P18898	376 aa		4.82	□□□□□ -1.64
FDC1	YDR539W	CLB4	P24871	460 aa		4.82	□□□□□ -1.64
FDC1	YDR539W	TFC3	P34111	1160 aa		4.82	□□□□□ -1.64
FDC1	YDR539W	PHO11	P35842	467 aa		4.82	□□□□□ -1.64
FDC1	YDR539W	SRL3	P36167	246 aa		4.82	□□□□□ -1.64
FDC1	YDR539W	APN2	P38207	520 aa		4.82	□□□□□ -1.64
FDC1	YDR539W	PHO12	P38693	467 aa		4.82	□□□□□ -1.64
FDC1	YDR539W	RTR1	P40084	226 aa	Predicted RBP	4.82	□□□□□ -1.64
FDC1	YDR539W	VID28	P40547	921 aa		4.82	□□□□□ -1.64
FDC1	YDR539W	SET2	P46995	733 aa	Known RBP	4.82	□□□□□ -1.64
FDC1	YDR539W	YNL247W	P53852	767 aa	Known RBP	4.82	□□□□□ -1.64
FDC1	YDR539W	NCS2	P53923	493 aa	Predicted RBP	4.82	□□□□□ -1.64
FDC1	YDR539W	HEF3	P53978	1044 aa	Known RBP	4.82	□□□□□ -1.64
FDC1	YDR539W	DCS2	Q12123	353 aa		4.82	□□□□□ -1.64
FDC1	YDR539W	SUT2	Q12286	268 aa		4.82	□□□□□ -1.64
FDC1	YDR539W	POM152	P39685	1337 aa		4.82	□□□□□ -1.64
FDC1	YDR539W	NAT1	P12945	854 aa	Known RBP	4.82	□□□□□ -1.64
FDC1	YDR539W	GFA1	P14742	717 aa	Known RBP	4.82	□□□□□ -1.64
FDC1	YDR539W	DPB3	P27344	201 aa		4.82	□□□□□ -1.64
FDC1	YDR539W	SWC3	P31376	625 aa		4.82	□□□□□ -1.64
FDC1	YDR539W	SSZ1	P38788	538 aa	Known RBP	4.82	□□□□□ -1.64
FDC1	YDR539W	LIN1	P38852	340 aa	Predicted RBP	4.82	□□□□□ -1.64
FDC1	YDR539W	CCT4	P39078	528 aa	Known RBP	4.82	□□□□□ -1.64
FDC1	YDR539W	YJL206C	P39529	758 aa		4.82	□□□□□ -1.64
FDC1	YDR539W	NOP9	P47077	666 aa	Known RBP	4.82	□□□□□ -1.64
FDC1	YDR539W	VPS73	P53142	486 aa	Known RBP	4.82	□□□□□ -1.64
FDC1	YDR539W	RRP46	P53256	223 aa	Predicted RBP	4.82	□□□□□ -1.64
FDC1	YDR539W	FHN1	P53279	174 aa		4.82	□□□□□ -1.64
FDC1	YDR539W	MAL13	P53338	473 aa		4.82	□□□□□ -1.64
FDC1	YDR539W	FMP30	Q02883	468 aa		4.82	□□□□□ -1.64
FDC1	YDR539W	YML119W	Q03208	357 aa		4.82	□□□□□ -1.64
FDC1	YDR539W	RBA50	Q04418	439 aa		4.82	□□□□□ -1.64
FDC1	YDR539W	FAR8	Q05040	523 aa		4.82	□□□□□ -1.64
FDC1	YDR539W	GUD1	Q07729	489 aa		4.82	□□□□□ -1.64
FDC1	YDR539W	RUD3	Q12234	484 aa	Known RBP	4.82	□□□□□ -1.64
FDC1	YDR539W	TOM1	Q03280	3268 aa		4.81	□□□□□ -1.64
FDC1	YDR539W	DUR1,2	P32528	1835 aa	Known RBP	4.81	□□□□□ -1.64
FDC1	YDR539W	YLR278C	Q05854	1341 aa		4.81	□□□□□ -1.64
FDC1	YDR539W	RPS24A	P0CX31	135 aa	Known RBP	4.81	□□□□□ -1.64
FDC1	YDR539W	RPS24B	P0CX32	135 aa	Known RBP	4.81	□□□□□ -1.64
FDC1	YDR539W	TAL1	P15019	335 aa	Known RBP	4.81	□□□□□ -1.64
FDC1	YDR539W	TUP1	P16649	713 aa		4.81	□□□□□ -1.64
FDC1	YDR539W	RPL8A	P17076	256 aa	Known RBP	4.81	□□□□□ -1.64
FDC1	YDR539W	RPO26	P20435	155 aa		4.81	□□□□□ -1.64
FDC1	YDR539W	BUD14	P27637	709 aa		4.81	□□□□□ -1.64
FDC1	YDR539W	PDB1	P32473	366 aa	Known RBP	4.81	□□□□□ -1.64
FDC1	YDR539W	RAD5	P32849	1169 aa	Predicted RBP	4.81	□□□□□ -1.64
FDC1	YDR539W	CSE1	P33307	960 aa		4.81	□□□□□ -1.64
FDC1	YDR539W	ECM4	P36156	370 aa		4.81	□□□□□ -1.64

Retrieved 100 of 5,963 RNA–protein pairs in 20.7 ms