RNA–Protein interactions for RNA: YDR393W

SHE9, Transcript of Protein required for normal mitochondrial morphology, yeast

Gene SHE9, Length 1,371 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SHE9	YDR393W	NOP14	Q99207	810 aa	Known RBP	4.27	□□□□□ -1.73
SHE9	YDR393W	AIM17	P23180	465 aa	Known RBP	4.27	□□□□□ -1.73
SHE9	YDR393W	PNO1	Q99216	274 aa	Known RBP	4.27	□□□□□ -1.73
SHE9	YDR393W	TUF1	P02992	437 aa	Known RBP	4.26	□□□□□ -1.73
SHE9	YDR393W	SFP1	P32432	683 aa		4.26	□□□□□ -1.73
SHE9	YDR393W	RMA1	P36001	430 aa	Known RBP	4.26	□□□□□ -1.73
SHE9	YDR393W	ENP2	P48234	707 aa	Known RBP	4.26	□□□□□ -1.73
SHE9	YDR393W	RAD33	Q04231	177 aa		4.26	□□□□□ -1.73
SHE9	YDR393W	DSS4	P32601	143 aa		4.25	□□□□□ -1.73
SHE9	YDR393W	GDA1	P32621	518 aa		4.25	□□□□□ -1.73
SHE9	YDR393W	IMD2	P38697	523 aa	Known RBP	4.25	□□□□□ -1.73
SHE9	YDR393W	GZF3	P42944	551 aa	Known RBP	4.25	□□□□□ -1.73
SHE9	YDR393W	IMD3	P50095	523 aa	Known RBP	4.25	□□□□□ -1.73
SHE9	YDR393W	MTQ2	Q03920	221 aa	Predicted RBP	4.25	□□□□□ -1.73
SHE9	YDR393W	CRT10	Q08226	957 aa		4.25	□□□□□ -1.73
SHE9	YDR393W	YOR111W	Q99210	232 aa		4.25	□□□□□ -1.73
SHE9	YDR393W	CET1	O13297	549 aa	Predicted RBP	4.24	□□□□□ -1.73
SHE9	YDR393W	MAK32	P23060	363 aa		4.24	□□□□□ -1.73
SHE9	YDR393W	CDC5	P32562	705 aa		4.24	□□□□□ -1.73
SHE9	YDR393W	MDV1	P47025	714 aa		4.24	□□□□□ -1.73
SHE9	YDR393W	PTA1	Q01329	785 aa	Predicted RBP	4.24	□□□□□ -1.73
SHE9	YDR393W	PCK1	P10963	549 aa		4.23	□□□□□ -1.73
SHE9	YDR393W	TYS1	P36421	394 aa	Known RBP	4.23	□□□□□ -1.73
SHE9	YDR393W	FTH1	P38310	465 aa		4.23	□□□□□ -1.73
SHE9	YDR393W	GND1	P38720	489 aa	Known RBP	4.23	□□□□□ -1.73
SHE9	YDR393W	SNU56	Q03782	492 aa	Known RBP	4.23	□□□□□ -1.73
SHE9	YDR393W	BET2	P20133	325 aa		4.22	□□□□□ -1.73
SHE9	YDR393W	PUF2	Q12221	1075 aa	Known RBP RIP-Chip data	4.22	□□□□□ -1.73	not detected
SHE9	YDR393W	GAL4	P04386	881 aa		4.21	□□□□□ -1.74
SHE9	YDR393W	DGR2	P32330	852 aa		4.21	□□□□□ -1.74
SHE9	YDR393W	HXT4	P32467	576 aa		4.21	□□□□□ -1.74
SHE9	YDR393W	RPT3	P33298	428 aa	Known RBP	4.21	□□□□□ -1.74
SHE9	YDR393W	RRP14	P36080	434 aa	Known RBP	4.21	□□□□□ -1.74
SHE9	YDR393W	YIL152W	P40455	235 aa		4.21	□□□□□ -1.74
SHE9	YDR393W	YIR016W	P40572	265 aa		4.21	□□□□□ -1.74
SHE9	YDR393W	CIN1	P40987	1014 aa		4.21	□□□□□ -1.74
SHE9	YDR393W	MNN11	P46985	422 aa	Known RBP	4.21	□□□□□ -1.74
SHE9	YDR393W	PEF1	P53238	335 aa		4.21	□□□□□ -1.74
SHE9	YDR393W	SQS1	P53866	767 aa	Known RBP	4.21	□□□□□ -1.74
SHE9	YDR393W	THI73	Q07904	523 aa		4.21	□□□□□ -1.74
SHE9	YDR393W	YTH1	Q06102	208 aa	Predicted RBP	4.2	□□□□□ -1.74
SHE9	YDR393W	YTM1	Q12024	460 aa	Predicted RBP	4.2	□□□□□ -1.74
SHE9	YDR393W	DID4	P36108	232 aa		4.19	□□□□□ -1.74
SHE9	YDR393W	SDH8	P38345	138 aa		4.19	□□□□□ -1.74
SHE9	YDR393W	ALG12	P53730	551 aa		4.19	□□□□□ -1.74
SHE9	YDR393W	ATX2	Q12067	313 aa		4.19	□□□□□ -1.74
SHE9	YDR393W	Q0010	Q9ZZX9	128 aa		4.19	□□□□□ -1.74
SHE9	YDR393W	ADR1	P07248	1323 aa		4.18	□□□□□ -1.74
SHE9	YDR393W	YCR043C	P25361	127 aa		4.18	□□□□□ -1.74
SHE9	YDR393W	BOP3	P53958	396 aa		4.18	□□□□□ -1.74
SHE9	YDR393W	MTD1	Q02046	320 aa	Known RBP	4.18	□□□□□ -1.74
SHE9	YDR393W	MTG2	P38860	518 aa		4.17	□□□□□ -1.74
SHE9	YDR393W	HLJ1	P48353	224 aa		4.17	□□□□□ -1.74
SHE9	YDR393W	DNM1	P54861	757 aa		4.17	□□□□□ -1.74
SHE9	YDR393W	YML119W	Q03208	357 aa		4.17	□□□□□ -1.74
SHE9	YDR393W	NGL1	Q08213	363 aa	Known RBP	4.17	□□□□□ -1.74
SHE9	YDR393W	DSE3	Q08729	430 aa		4.17	□□□□□ -1.74
SHE9	YDR393W	GET3	Q12154	354 aa	Known RBP	4.17	□□□□□ -1.74
SHE9	YDR393W	UBX3	Q12229	455 aa		4.17	□□□□□ -1.74
SHE9	YDR393W	SEC12	P11655	471 aa		4.16	□□□□□ -1.74
SHE9	YDR393W	RRP43	P25359	394 aa	Predicted RBP	4.16	□□□□□ -1.74
SHE9	YDR393W	CIR1	P42940	261 aa		4.16	□□□□□ -1.74
SHE9	YDR393W	YNL058C	P53947	316 aa		4.16	□□□□□ -1.74
SHE9	YDR393W	VTC3	Q02725	835 aa		4.16	□□□□□ -1.74
SHE9	YDR393W	NOP56	Q12460	504 aa	Known RBP RIP-Chip data	4.16	□□□□□ -1.74	not detected
SHE9	YDR393W	RTC1	Q08281	1341 aa		4.16	□□□□□ -1.74
SHE9	YDR393W	ILS1	P09436	1072 aa	Known RBP	4.15	□□□□□ -1.74
SHE9	YDR393W	NOP1	P15646	327 aa	Known RBP	4.15	□□□□□ -1.74
SHE9	YDR393W	CBP3	P21560	335 aa		4.15	□□□□□ -1.74
SHE9	YDR393W	ATP12	P22135	325 aa		4.15	□□□□□ -1.74
SHE9	YDR393W	AEP2	P22136	580 aa		4.15	□□□□□ -1.74
SHE9	YDR393W	AMD2	P22580	549 aa		4.15	□□□□□ -1.74
SHE9	YDR393W	ARC40	P38328	384 aa	Known RBP	4.15	□□□□□ -1.74
SHE9	YDR393W	TOM71	P38825	639 aa	Known RBP	4.15	□□□□□ -1.74
SHE9	YDR393W	TES1	P41903	349 aa	Known RBP	4.15	□□□□□ -1.74
SHE9	YDR393W	COG2	P53271	262 aa		4.15	□□□□□ -1.74
SHE9	YDR393W	FPR4	Q06205	392 aa	Predicted RBP	4.15	□□□□□ -1.74
SHE9	YDR393W	RAD34	Q06665	692 aa		4.15	□□□□□ -1.74
SHE9	YDR393W	PFA4	Q12006	378 aa		4.15	□□□□□ -1.74
SHE9	YDR393W	YTA7	P40340	1379 aa		4.15	□□□□□ -1.74
SHE9	YDR393W	CHO2	P05374	869 aa	Known RBP	4.14	□□□□□ -1.75
SHE9	YDR393W	PHO2	P07269	559 aa		4.14	□□□□□ -1.75
SHE9	YDR393W	SCW10	Q04951	389 aa		4.14	□□□□□ -1.75
SHE9	YDR393W	GRS2	Q06817	618 aa		4.14	□□□□□ -1.75
SHE9	YDR393W	MLH2	Q07980	695 aa		4.14	□□□□□ -1.75
SHE9	YDR393W	LYS21	Q12122	440 aa	Known RBP	4.14	□□□□□ -1.75
SHE9	YDR393W	SER1	P33330	395 aa	Known RBP	4.14	□□□□□ -1.75
SHE9	YDR393W	KES1	P35844	434 aa	Known RBP	4.14	□□□□□ -1.75
SHE9	YDR393W	MNN1	P39106	762 aa		4.14	□□□□□ -1.75
SHE9	YDR393W	ARA2	Q04212	335 aa		4.14	□□□□□ -1.75
SHE9	YDR393W	YMR034C	Q05131	434 aa	Predicted RBP	4.14	□□□□□ -1.75
SHE9	YDR393W	NRT1	Q08485	598 aa		4.14	□□□□□ -1.75
SHE9	YDR393W	LCB4	Q12246	624 aa		4.14	□□□□□ -1.75
SHE9	YDR393W	CWH43	P25618	953 aa		4.13	□□□□□ -1.75
SHE9	YDR393W	PLC1	P32383	869 aa		4.13	□□□□□ -1.75
SHE9	YDR393W	VPS8	P39702	1274 aa		4.13	□□□□□ -1.75
SHE9	YDR393W	LAS21	P40367	830 aa		4.13	□□□□□ -1.75
SHE9	YDR393W	RNR4	P49723	345 aa	Known RBP	4.13	□□□□□ -1.75
SHE9	YDR393W	GPG1	P53130	126 aa		4.13	□□□□□ -1.75
SHE9	YDR393W	UBP16	Q02863	499 aa		4.13	□□□□□ -1.75

Retrieved 100 of 5,963 RNA–protein pairs in 15.7 ms