RNA–Protein interactions for RNA: YDR339C

FCF1, Transcript of Putative PINc domain nuclease, yeast

Gene FCF1, Length 570 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
FCF1	YDR339C	BEM3	P32873	1128 aa		4.24	□□□□□ -1.73
FCF1	YDR339C	NPR3	P38742	1146 aa		4.24	□□□□□ -1.73
FCF1	YDR339C	FMO1	P38866	432 aa		4.24	□□□□□ -1.73
FCF1	YDR339C	HRB1	P38922	454 aa	Known RBP RIP-Chip data	4.24	□□□□□ -1.73	not detected
FCF1	YDR339C	LYS9	P38999	446 aa		4.24	□□□□□ -1.73
FCF1	YDR339C	YEL076C	P39971	216 aa		4.24	□□□□□ -1.73
FCF1	YDR339C	YEL020C	P39994	560 aa		4.24	□□□□□ -1.73
FCF1	YDR339C	GID8	P40208	455 aa		4.24	□□□□□ -1.73
FCF1	YDR339C	RPT2	P40327	437 aa	Known RBP	4.24	□□□□□ -1.73
FCF1	YDR339C	PRP31	P49704	494 aa	Predicted RBP	4.24	□□□□□ -1.73
FCF1	YDR339C	SAP4	P53036	818 aa		4.24	□□□□□ -1.73
FCF1	YDR339C	YAP1802	P53309	568 aa		4.24	□□□□□ -1.73
FCF1	YDR339C	MRPL13	Q02204	264 aa		4.24	□□□□□ -1.73
FCF1	YDR339C	EIS1	Q05050	843 aa	Known RBP	4.24	□□□□□ -1.73
FCF1	YDR339C	MCM21	Q06675	368 aa		4.24	□□□□□ -1.73
FCF1	YDR339C	TY3B-G	Q99315	1547 aa		4.24	□□□□□ -1.73
FCF1	YDR339C	ULS1	Q08562	1619 aa		4.24	□□□□□ -1.73
FCF1	YDR339C	PHO5	P00635	467 aa		4.23	□□□□□ -1.73
FCF1	YDR339C	CDC31	P06704	161 aa	Known RBP	4.23	□□□□□ -1.73
FCF1	YDR339C	ERG20	P08524	352 aa	Known RBP	4.23	□□□□□ -1.73
FCF1	YDR339C	MTF2	P10849	440 aa		4.23	□□□□□ -1.73
FCF1	YDR339C	ERG6	P25087	383 aa	Known RBP	4.23	□□□□□ -1.73
FCF1	YDR339C	YCL049C	P25577	312 aa		4.23	□□□□□ -1.73
FCF1	YDR339C	IMG2	P25642	146 aa	Predicted RBP	4.23	□□□□□ -1.73
FCF1	YDR339C	SLC1	P33333	303 aa		4.23	□□□□□ -1.73
FCF1	YDR339C	GLG1	P36143	616 aa		4.23	□□□□□ -1.73
FCF1	YDR339C	YHR112C	P38716	378 aa		4.23	□□□□□ -1.73
FCF1	YDR339C	SWD1	P39706	426 aa		4.23	□□□□□ -1.73
FCF1	YDR339C	SCS2	P40075	244 aa	Known RBP	4.23	□□□□□ -1.73
FCF1	YDR339C	CTR1	P49573	406 aa		4.23	□□□□□ -1.73
FCF1	YDR339C	MRI1	Q06489	411 aa	Known RBP	4.23	□□□□□ -1.73
FCF1	YDR339C	VHS3	Q08438	674 aa		4.23	□□□□□ -1.73
FCF1	YDR339C	YOL087C	Q99247	1116 aa		4.23	□□□□□ -1.73
FCF1	YDR339C	PDR5	P33302	1511 aa	Known RBP	4.22	□□□□□ -1.73
FCF1	YDR339C	PYC1	P11154	1178 aa	Known RBP	4.22	□□□□□ -1.73
FCF1	YDR339C	ADE2	P21264	571 aa	Known RBP	4.22	□□□□□ -1.73
FCF1	YDR339C	ROX1	P25042	368 aa		4.22	□□□□□ -1.73
FCF1	YDR339C	CWH43	P25618	953 aa		4.22	□□□□□ -1.73
FCF1	YDR339C	TMT1	P32643	299 aa		4.22	□□□□□ -1.73
FCF1	YDR339C	APL2	P36000	726 aa	Predicted RBP	4.22	□□□□□ -1.73
FCF1	YDR339C	UME6	P39001	836 aa		4.22	□□□□□ -1.73
FCF1	YDR339C	FUN12	P39730	1002 aa	Known RBP	4.22	□□□□□ -1.73
FCF1	YDR339C	EAF5	P39995	279 aa		4.22	□□□□□ -1.73
FCF1	YDR339C	PXA1	P41909	870 aa		4.22	□□□□□ -1.73
FCF1	YDR339C	ERR3	P42222	437 aa		4.22	□□□□□ -1.73
FCF1	YDR339C	CPR6	P53691	371 aa	Known RBP	4.22	□□□□□ -1.73
FCF1	YDR339C	MDG1	P53885	366 aa		4.22	□□□□□ -1.73
FCF1	YDR339C	VBA4	Q04602	768 aa	Known RBP	4.22	□□□□□ -1.73
FCF1	YDR339C	CIA1	Q05583	330 aa		4.22	□□□□□ -1.73
FCF1	YDR339C	MLH3	Q12083	715 aa		4.22	□□□□□ -1.73
FCF1	YDR339C	HOS1	Q12214	470 aa		4.22	□□□□□ -1.73
FCF1	YDR339C	MED1	Q12321	566 aa		4.22	□□□□□ -1.73
FCF1	YDR339C	ERP4	Q12450	207 aa		4.22	□□□□□ -1.73
FCF1	YDR339C	TUF1	P02992	437 aa	Known RBP	4.21	□□□□□ -1.74
FCF1	YDR339C	LEU2	P04173	364 aa	Predicted RBP	4.21	□□□□□ -1.74
FCF1	YDR339C	NUC1	P08466	329 aa		4.21	□□□□□ -1.74
FCF1	YDR339C	MRP7	P12687	371 aa		4.21	□□□□□ -1.74
FCF1	YDR339C	PFK2	P16862	959 aa	Known RBP RIP-Chip data	4.21	□□□□□ -1.74	not detected
FCF1	YDR339C	CBP3	P21560	335 aa		4.21	□□□□□ -1.74
FCF1	YDR339C	MCM3	P24279	971 aa	Known RBP	4.21	□□□□□ -1.74
FCF1	YDR339C	PHO11	P35842	467 aa		4.21	□□□□□ -1.74
FCF1	YDR339C	PHO12	P38693	467 aa		4.21	□□□□□ -1.74
FCF1	YDR339C	MAD3	P47074	515 aa		4.21	□□□□□ -1.74
FCF1	YDR339C	TAF4	P50105	388 aa		4.21	□□□□□ -1.74
FCF1	YDR339C	GLO1	P50107	326 aa		4.21	□□□□□ -1.74
FCF1	YDR339C	PEF1	P53238	335 aa		4.21	□□□□□ -1.74
FCF1	YDR339C	MEP3	P53390	489 aa		4.21	□□□□□ -1.74
FCF1	YDR339C	SQS1	P53866	767 aa	Known RBP	4.21	□□□□□ -1.74
FCF1	YDR339C	TIM50	Q02776	476 aa		4.21	□□□□□ -1.74
FCF1	YDR339C	CTK1	Q03957	528 aa	Known RBP	4.21	□□□□□ -1.74
FCF1	YDR339C	ARA2	Q04212	335 aa		4.21	□□□□□ -1.74
FCF1	YDR339C	IWR1	Q07532	353 aa	Predicted RBP	4.21	□□□□□ -1.74
FCF1	YDR339C	CRD1	Q07560	283 aa		4.21	□□□□□ -1.74
FCF1	YDR339C	ISA1	Q07821	250 aa	Predicted RBP	4.21	□□□□□ -1.74
FCF1	YDR339C	YDR056C	Q12025	205 aa		4.21	□□□□□ -1.74
FCF1	YDR339C	RVB2	Q12464	471 aa	Known RBP	4.21	□□□□□ -1.74
FCF1	YDR339C	MDS3	P53094	1487 aa		4.21	□□□□□ -1.74
FCF1	YDR339C	GEA2	P39993	1459 aa	Known RBP	4.2	□□□□□ -1.74
FCF1	YDR339C	ADH4	P10127	382 aa		4.2	□□□□□ -1.74
FCF1	YDR339C	FRS1	P15624	595 aa	Known RBP	4.2	□□□□□ -1.74
FCF1	YDR339C	SIR1	P21691	654 aa		4.2	□□□□□ -1.74
FCF1	YDR339C	UBC1	P21734	215 aa	Known RBP	4.2	□□□□□ -1.74
FCF1	YDR339C	RAD16	P31244	790 aa		4.2	□□□□□ -1.74
FCF1	YDR339C	NUP60	P39705	539 aa		4.2	□□□□□ -1.74
FCF1	YDR339C	SPC72	P39723	622 aa		4.2	□□□□□ -1.74
FCF1	YDR339C	NOP16	P40007	231 aa	Known RBP	4.2	□□□□□ -1.74
FCF1	YDR339C	NDE1	P40215	560 aa		4.2	□□□□□ -1.74
FCF1	YDR339C	PSF2	P40359	213 aa		4.2	□□□□□ -1.74
FCF1	YDR339C	ARG2	P40360	574 aa		4.2	□□□□□ -1.74
FCF1	YDR339C	FHN1	P53279	174 aa		4.2	□□□□□ -1.74
FCF1	YDR339C	SPO1	P53541	631 aa		4.2	□□□□□ -1.74
FCF1	YDR339C	ARG5,6	Q01217	863 aa		4.2	□□□□□ -1.74
FCF1	YDR339C	YPS7	Q06325	596 aa		4.2	□□□□□ -1.74
FCF1	YDR339C	CSR1	Q06705	408 aa	Known RBP	4.2	□□□□□ -1.74
FCF1	YDR339C	STP4	Q07351	490 aa		4.2	□□□□□ -1.74
FCF1	YDR339C	VTH1	P40438	1549 aa		4.2	□□□□□ -1.74
FCF1	YDR339C	VTH2	P40890	1549 aa		4.2	□□□□□ -1.74
FCF1	YDR339C	MMS1	Q06211	1407 aa		4.2	□□□□□ -1.74
FCF1	YDR339C	GCN2	P15442	1659 aa		4.19	□□□□□ -1.74
FCF1	YDR339C	TY3B-I	Q7LHG5	1498 aa	Known RBP	4.19	□□□□□ -1.74

Retrieved 100 of 5,963 RNA–protein pairs in 18.3 ms