RNA–Protein interactions for RNA: YDR182W

CDC1, Transcript of Putative lipid phosphatase of the endoplasmic reticulum, yeast

Gene CDC1, Length 1,476 nt, Biotype protein coding, Subcellular localisation Mitochondria .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CDC1	YDR182W	YGR283C	P53336	341 aa	Predicted RBP	6.67	□□□□□ -1.34
CDC1	YDR182W	BET4	Q00618	327 aa		6.67	□□□□□ -1.34
CDC1	YDR182W	TFB3	Q03290	321 aa		6.67	□□□□□ -1.34
CDC1	YDR182W	AAD4	Q07747	329 aa		6.67	□□□□□ -1.34
CDC1	YDR182W	VPS5	Q92331	675 aa		6.67	□□□□□ -1.34
CDC1	YDR182W	TRM1	P15565	570 aa	Known RBP	6.66	□□□□□ -1.34
CDC1	YDR182W	YKL050C	P35736	922 aa		6.66	□□□□□ -1.34
CDC1	YDR182W	SRX1	P36077	127 aa		6.66	□□□□□ -1.34
CDC1	YDR182W	TDA3	P38758	523 aa		6.66	□□□□□ -1.34
CDC1	YDR182W	EXO1	P39875	702 aa		6.66	□□□□□ -1.34
CDC1	YDR182W	SAP185	P40856	1058 aa		6.66	□□□□□ -1.34
CDC1	YDR182W	DOS2	P54858	310 aa		6.66	□□□□□ -1.34
CDC1	YDR182W	RKM2	Q03942	479 aa		6.66	□□□□□ -1.34
CDC1	YDR182W	YLR287C	Q05881	355 aa		6.66	□□□□□ -1.34
CDC1	YDR182W	RRP6	Q12149	733 aa	Known RBP	6.66	□□□□□ -1.34
CDC1	YDR182W	CYC8	P14922	966 aa		6.66	□□□□□ -1.34
CDC1	YDR182W	ABD1	P32783	436 aa	Predicted RBP	6.66	□□□□□ -1.34
CDC1	YDR182W	BAT1	P38891	393 aa	Known RBP	6.66	□□□□□ -1.34
CDC1	YDR182W	SAK1	P38990	1142 aa		6.66	□□□□□ -1.34
CDC1	YDR182W	PAC1	P39946	494 aa	Known RBP	6.66	□□□□□ -1.34
CDC1	YDR182W	TMA108	P40462	946 aa		6.66	□□□□□ -1.34
CDC1	YDR182W	SER33	P40510	469 aa		6.66	□□□□□ -1.34
CDC1	YDR182W	EMW1	P42842	904 aa	Known RBP	6.66	□□□□□ -1.34
CDC1	YDR182W	AMA1	P50082	593 aa		6.66	□□□□□ -1.34
CDC1	YDR182W	AQR1	P53943	586 aa		6.66	□□□□□ -1.34
CDC1	YDR182W	EST1	P17214	699 aa	Predicted RBP	6.65	□□□□□ -1.35
CDC1	YDR182W	CCR4	P31384	837 aa	Known RBP	6.65	□□□□□ -1.35
CDC1	YDR182W	TFB1	P32776	642 aa		6.65	□□□□□ -1.35
CDC1	YDR182W	NCL1	P38205	684 aa	Known RBP	6.65	□□□□□ -1.35
CDC1	YDR182W	WSC4	P38739	605 aa		6.65	□□□□□ -1.35
CDC1	YDR182W	YPT35	P38815	214 aa	Known RBP	6.65	□□□□□ -1.35
CDC1	YDR182W	LAM1	P38851	1228 aa		6.65	□□□□□ -1.35
CDC1	YDR182W	LYS9	P38999	446 aa		6.65	□□□□□ -1.35
CDC1	YDR182W	EDC3	P39998	551 aa	Known RBP	6.65	□□□□□ -1.35
CDC1	YDR182W	TMN3	P40071	706 aa		6.65	□□□□□ -1.35
CDC1	YDR182W	KTR7	P40504	517 aa		6.65	□□□□□ -1.35
CDC1	YDR182W	YIL054W	P40524	105 aa		6.65	□□□□□ -1.35
CDC1	YDR182W	HXT8	P40886	569 aa		6.65	□□□□□ -1.35
CDC1	YDR182W	SNG1	P46950	547 aa		6.65	□□□□□ -1.35
CDC1	YDR182W	YGR111W	P53265	400 aa		6.65	□□□□□ -1.35
CDC1	YDR182W	ADI1	Q03677	179 aa		6.65	□□□□□ -1.35
CDC1	YDR182W	LCB5	Q06147	687 aa	Known RBP	6.65	□□□□□ -1.35
CDC1	YDR182W	YLR012C	Q07927	99 aa		6.65	□□□□□ -1.35
CDC1	YDR182W	PER33	Q12144	273 aa		6.65	□□□□□ -1.35
CDC1	YDR182W	DAL81	P21657	970 aa		6.64	□□□□□ -1.35
CDC1	YDR182W	FSH1	P38777	243 aa	Known RBP	6.64	□□□□□ -1.35
CDC1	YDR182W	CRP1	P38845	465 aa	Known RBP	6.64	□□□□□ -1.35
CDC1	YDR182W	YJR061W	P40355	935 aa		6.64	□□□□□ -1.35
CDC1	YDR182W	MNN10	P50108	393 aa	Known RBP	6.64	□□□□□ -1.35
CDC1	YDR182W	EMC4	P53073	190 aa		6.64	□□□□□ -1.35
CDC1	YDR182W	PEX31	P53203	462 aa		6.64	□□□□□ -1.35
CDC1	YDR182W	YNR063W	P53749	607 aa		6.64	□□□□□ -1.35
CDC1	YDR182W	YLR046C	Q12253	270 aa		6.64	□□□□□ -1.35
CDC1	YDR182W	HIS1	P00498	297 aa	Known RBP	6.63	□□□□□ -1.35
CDC1	YDR182W	SPO12	P17123	173 aa		6.63	□□□□□ -1.35
CDC1	YDR182W	GEX1	P25596	615 aa		6.63	□□□□□ -1.35
CDC1	YDR182W	ADY2	P25613	283 aa		6.63	□□□□□ -1.35
CDC1	YDR182W	PYC2	P32327	1180 aa	Known RBP	6.63	□□□□□ -1.35
CDC1	YDR182W	PXA2	P34230	853 aa		6.63	□□□□□ -1.35
CDC1	YDR182W	UTH1	P36135	365 aa		6.63	□□□□□ -1.35
CDC1	YDR182W	GEX2	P36173	615 aa		6.63	□□□□□ -1.35
CDC1	YDR182W	MRPL40	P36534	297 aa		6.63	□□□□□ -1.35
CDC1	YDR182W	PRM9	P39551	298 aa		6.63	□□□□□ -1.35
CDC1	YDR182W	STL1	P39932	569 aa		6.63	□□□□□ -1.35
CDC1	YDR182W	AIM23	P47015	356 aa		6.63	□□□□□ -1.35
CDC1	YDR182W	NUP84	P52891	726 aa		6.63	□□□□□ -1.35
CDC1	YDR182W	PIR1	Q03178	341 aa		6.63	□□□□□ -1.35
CDC1	YDR182W	YMR187C	Q03236	431 aa		6.63	□□□□□ -1.35
CDC1	YDR182W	CLU1	Q03690	1277 aa	Known RBP	6.63	□□□□□ -1.35
CDC1	YDR182W	THI21	Q08975	551 aa		6.63	□□□□□ -1.35
CDC1	YDR182W	TRX1	P22217	103 aa	Known RBP	6.62	□□□□□ -1.35
CDC1	YDR182W	ARL1	P38116	183 aa	Known RBP	6.62	□□□□□ -1.35
CDC1	YDR182W	SMC2	P38989	1170 aa	Known RBP	6.62	□□□□□ -1.35
CDC1	YDR182W	VAC8	P39968	578 aa		6.62	□□□□□ -1.35
CDC1	YDR182W	TIF34	P40217	347 aa	Known RBP	6.62	□□□□□ -1.35
CDC1	YDR182W	KHA1	P40309	873 aa		6.62	□□□□□ -1.35
CDC1	YDR182W	YPS6	P40583	537 aa		6.62	□□□□□ -1.35
CDC1	YDR182W	ASN2	P49090	572 aa	Known RBP	6.62	□□□□□ -1.35
CDC1	YDR182W	SXM1	Q04175	944 aa	Known RBP	6.62	□□□□□ -1.35
CDC1	YDR182W	RPC11	Q04307	110 aa	Predicted RBP	6.62	□□□□□ -1.35
CDC1	YDR182W	ENO1	P00924	437 aa	Known RBP	6.61	□□□□□ -1.35
CDC1	YDR182W	PYC1	P11154	1178 aa	Known RBP	6.61	□□□□□ -1.35
CDC1	YDR182W	PHO13	P19881	312 aa		6.61	□□□□□ -1.35
CDC1	YDR182W	SPC110	P32380	944 aa		6.61	□□□□□ -1.35
CDC1	YDR182W	HXT3	P32466	567 aa	Known RBP	6.61	□□□□□ -1.35
CDC1	YDR182W	RKM3	P38222	552 aa		6.61	□□□□□ -1.35
CDC1	YDR182W	SWC5	P38326	303 aa		6.61	□□□□□ -1.35
CDC1	YDR182W	SRP68	P38687	599 aa	Known RBP	6.61	□□□□□ -1.35
CDC1	YDR182W	YMR124W	P39523	943 aa	Known RBP	6.61	□□□□□ -1.35
CDC1	YDR182W	TRF5	P48561	642 aa	Known RBP	6.61	□□□□□ -1.35
CDC1	YDR182W	COQ5	P49017	307 aa		6.61	□□□□□ -1.35
CDC1	YDR182W	VPS75	P53853	264 aa		6.61	□□□□□ -1.35
CDC1	YDR182W	SND1	Q04007	877 aa		6.61	□□□□□ -1.35
CDC1	YDR182W	OPI10	Q08202	246 aa		6.61	□□□□□ -1.35
CDC1	YDR182W	CLP1	Q08685	445 aa	Predicted RBP	6.61	□□□□□ -1.35
CDC1	YDR182W	ATG9	Q12142	997 aa		6.61	□□□□□ -1.35
CDC1	YDR182W	IRA1	P18963	3092 aa		6.61	□□□□□ -1.35
CDC1	YDR182W	IME2	P32581	645 aa		6.6	□□□□□ -1.35
CDC1	YDR182W	AIM26	P32858	118 aa		6.6	□□□□□ -1.35
CDC1	YDR182W	ADD66	P36040	267 aa		6.6	□□□□□ -1.35

Retrieved 100 of 5,963 RNA–protein pairs in 111.9 ms