RNA–Protein interactions for RNA: YDL185W

VMA1, Transcript of Subunit A of the V1 peripheral membrane domain of V-ATPase, yeast

Gene VMA1, Length 3,216 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
VMA1	YDL185W	EXO5	P38289	585 aa		4.11	□□□□□ -1.75
VMA1	YDL185W	YHL012W	P38709	493 aa		4.11	□□□□□ -1.75
VMA1	YDL185W	IES5	P40060	125 aa		4.11	□□□□□ -1.75
VMA1	YDL185W	UBP7	P40453	1071 aa		4.11	□□□□□ -1.75
VMA1	YDL185W	MSE1	P48525	536 aa		4.11	□□□□□ -1.75
VMA1	YDL185W	NUP84	P52891	726 aa		4.11	□□□□□ -1.75
VMA1	YDL185W	URC2	Q04411	772 aa		4.11	□□□□□ -1.75
VMA1	YDL185W	YLR326W	Q06170	240 aa	Known RBP	4.11	□□□□□ -1.75
VMA1	YDL185W	NTG2	Q08214	380 aa		4.11	□□□□□ -1.75
VMA1	YDL185W	PUS7	Q08647	676 aa	Known RBP	4.11	□□□□□ -1.75
VMA1	YDL185W	HAT1	Q12341	374 aa		4.11	□□□□□ -1.75
VMA1	YDL185W	TCB1	Q12466	1186 aa		4.11	□□□□□ -1.75
VMA1	YDL185W	SNF4	P12904	322 aa		4.11	□□□□□ -1.75
VMA1	YDL185W	PRP45	P28004	379 aa	Predicted RBP	4.11	□□□□□ -1.75
VMA1	YDL185W	IRE1	P32361	1115 aa		4.11	□□□□□ -1.75
VMA1	YDL185W	PEP7	P32609	515 aa		4.11	□□□□□ -1.75
VMA1	YDL185W	YPK3	P38070	525 aa		4.11	□□□□□ -1.75
VMA1	YDL185W	POP4	P38336	279 aa		4.11	□□□□□ -1.75
VMA1	YDL185W	FTR1	P40088	404 aa		4.11	□□□□□ -1.75
VMA1	YDL185W	YTA12	P40341	825 aa		4.11	□□□□□ -1.75
VMA1	YDL185W	KTR7	P40504	517 aa		4.11	□□□□□ -1.75
VMA1	YDL185W	GUP1	P53154	560 aa		4.11	□□□□□ -1.75
VMA1	YDL185W	DSE4	P53753	1117 aa		4.11	□□□□□ -1.75
VMA1	YDL185W	FAR10	Q06001	478 aa		4.11	□□□□□ -1.75
VMA1	YDL185W	SMD2	Q06217	110 aa	Known RBP	4.11	□□□□□ -1.75
VMA1	YDL185W	SPE3	Q12074	293 aa	Known RBP	4.11	□□□□□ -1.75
VMA1	YDL185W	BAG7	Q12128	409 aa		4.11	□□□□□ -1.75
VMA1	YDL185W	ADF1	Q2V2Q1	113 aa		4.11	□□□□□ -1.75
VMA1	YDL185W	CYB2	P00175	591 aa		4.1	□□□□□ -1.75
VMA1	YDL185W	RHO1	P06780	209 aa	Known RBP	4.1	□□□□□ -1.75
VMA1	YDL185W	KAR4	P25583	335 aa		4.1	□□□□□ -1.75
VMA1	YDL185W	CTP1	P38152	299 aa		4.1	□□□□□ -1.75
VMA1	YDL185W	CHS6	P40955	746 aa		4.1	□□□□□ -1.75
VMA1	YDL185W	COG2	P53271	262 aa		4.1	□□□□□ -1.75
VMA1	YDL185W	CNM67	P53865	581 aa	Known RBP	4.1	□□□□□ -1.75
VMA1	YDL185W	SSQ1	Q05931	657 aa	Predicted RBP	4.1	□□□□□ -1.75
VMA1	YDL185W	YET3	Q07451	203 aa		4.1	□□□□□ -1.75
VMA1	YDL185W	GPM3	Q12326	303 aa		4.1	□□□□□ -1.75
VMA1	YDL185W	GRX6	Q12438	231 aa		4.1	□□□□□ -1.75
VMA1	YDL185W	YEL077C	Q3E7X8	1277 aa		4.1	□□□□□ -1.75
VMA1	YDL185W	RIF1	P29539	1916 aa		4.1	□□□□□ -1.75
VMA1	YDL185W	LEU1	P07264	779 aa	Known RBP	4.1	□□□□□ -1.75
VMA1	YDL185W	ILS1	P09436	1072 aa	Known RBP	4.1	□□□□□ -1.75
VMA1	YDL185W	IDI1	P15496	288 aa		4.1	□□□□□ -1.75
VMA1	YDL185W	CMK1	P27466	446 aa	Known RBP	4.1	□□□□□ -1.75
VMA1	YDL185W	MGM1	P32266	881 aa		4.1	□□□□□ -1.75
VMA1	YDL185W	PRP19	P32523	503 aa	Known RBP	4.1	□□□□□ -1.75
VMA1	YDL185W	UTP30	P36144	274 aa	Known RBP	4.1	□□□□□ -1.75
VMA1	YDL185W	CCT3	P39077	534 aa	Known RBP	4.1	□□□□□ -1.75
VMA1	YDL185W	CCT6	P39079	546 aa		4.1	□□□□□ -1.75
VMA1	YDL185W	ULP2	P40537	1034 aa	Predicted RBP	4.1	□□□□□ -1.75
VMA1	YDL185W	INP51	P40559	946 aa	Known RBP	4.1	□□□□□ -1.75
VMA1	YDL185W	TY4A-J	P47023	414 aa		4.1	□□□□□ -1.75
VMA1	YDL185W	SNX4	P47057	423 aa		4.1	□□□□□ -1.75
VMA1	YDL185W	IMD3	P50095	523 aa	Known RBP	4.1	□□□□□ -1.75
VMA1	YDL185W	YMR099C	Q03161	297 aa	Known RBP	4.1	□□□□□ -1.75
VMA1	YDL185W	YDR090C	Q03193	310 aa		4.1	□□□□□ -1.75
VMA1	YDL185W	ADI1	Q03677	179 aa		4.1	□□□□□ -1.75
VMA1	YDL185W	TAF12	Q03761	539 aa		4.1	□□□□□ -1.75
VMA1	YDL185W	ATG16	Q03818	150 aa		4.1	□□□□□ -1.75
VMA1	YDL185W	SND1	Q04007	877 aa		4.1	□□□□□ -1.75
VMA1	YDL185W	SPC2	Q04969	178 aa		4.1	□□□□□ -1.75
VMA1	YDL185W	DSE3	Q08729	430 aa		4.1	□□□□□ -1.75
VMA1	YDL185W	PHM7	Q12252	991 aa		4.1	□□□□□ -1.75
VMA1	YDL185W	BI2	P03873	423 aa		4.1	□□□□□ -1.75
VMA1	YDL185W	FUS1	P11710	512 aa		4.1	□□□□□ -1.75
VMA1	YDL185W	AEP2	P22136	580 aa		4.1	□□□□□ -1.75
VMA1	YDL185W	ESS1	P22696	170 aa		4.1	□□□□□ -1.75
VMA1	YDL185W	PAC11	P40960	533 aa		4.1	□□□□□ -1.75
VMA1	YDL185W	FIG4	P42837	879 aa		4.1	□□□□□ -1.75
VMA1	YDL185W	TEP1	P53916	434 aa		4.1	□□□□□ -1.75
VMA1	YDL185W	ISU1	Q03020	165 aa		4.1	□□□□□ -1.75
VMA1	YDL185W	YML083C	Q04526	418 aa		4.1	□□□□□ -1.75
VMA1	YDL185W	YPR172W	Q06608	200 aa		4.1	□□□□□ -1.75
VMA1	YDL185W	THI20	Q08224	551 aa		4.1	□□□□□ -1.75
VMA1	YDL185W	FLO11	P08640	1367 aa		4.09	□□□□□ -1.75
VMA1	YDL185W	SEN2	P16658	377 aa		4.09	□□□□□ -1.75
VMA1	YDL185W	VPS33	P20795	691 aa		4.09	□□□□□ -1.75
VMA1	YDL185W	CTR86	P25355	563 aa		4.09	□□□□□ -1.75
VMA1	YDL185W	ZIP1	P31111	875 aa		4.09	□□□□□ -1.75
VMA1	YDL185W	DBF4	P32325	704 aa		4.09	□□□□□ -1.75
VMA1	YDL185W	BIO2	P32451	375 aa		4.09	□□□□□ -1.75
VMA1	YDL185W	RRN6	P32786	894 aa		4.09	□□□□□ -1.75
VMA1	YDL185W	UGP1	P32861	499 aa	Known RBP	4.09	□□□□□ -1.75
VMA1	YDL185W	STB6	P36085	766 aa		4.09	□□□□□ -1.75
VMA1	YDL185W	HPM1	P40481	377 aa		4.09	□□□□□ -1.75
VMA1	YDL185W	SAE2	P46946	345 aa		4.09	□□□□□ -1.75
VMA1	YDL185W	HXT15	P54854	567 aa		4.09	□□□□□ -1.75
VMA1	YDL185W	ADE13	Q05911	482 aa	Known RBP	4.09	□□□□□ -1.75
VMA1	YDL185W	FMP45	Q07651	309 aa		4.09	□□□□□ -1.75
VMA1	YDL185W	PUF3	Q07807	879 aa	Known RBP RIP-Chip data	4.09	□□□□□ -1.75	not detected
VMA1	YDL185W	SGT1	Q08446	395 aa		4.09	□□□□□ -1.75
VMA1	YDL185W	YDL109C	Q12103	647 aa		4.09	□□□□□ -1.75
VMA1	YDL185W	RRP36	Q12481	300 aa	Predicted RBP	4.09	□□□□□ -1.75
VMA1	YDL185W	GPM1	P00950	247 aa	Known RBP	4.09	□□□□□ -1.76
VMA1	YDL185W	RPL6B	P05739	176 aa	Known RBP	4.09	□□□□□ -1.76
VMA1	YDL185W	SNF1	P06782	633 aa	Known RBP	4.09	□□□□□ -1.76
VMA1	YDL185W	NFT1	P0CE68	1218 aa		4.09	□□□□□ -1.76
VMA1	YDL185W	MEI4	P29467	408 aa		4.09	□□□□□ -1.76
VMA1	YDL185W	CCR4	P31384	837 aa	Known RBP	4.09	□□□□□ -1.76

Retrieved 100 of 5,963 RNA–protein pairs in 14.5 ms