RNA–Protein interactions for RNA: YDL165W

CDC36, Transcript of Component of the CCR4-NOT core complex, yeastyeast

Gene CDC36, Length 576 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CDC36YDL165W YPK1P12688 680 aaKnown RBP2.1□□□□□ -2.07
CDC36YDL165W TIM23P32897 222 aa2.1□□□□□ -2.07
CDC36YDL165W MNN1P39106 762 aa2.1□□□□□ -2.07
CDC36YDL165W YDL183CP48569 320 aa2.1□□□□□ -2.07
CDC36YDL165W NOP15P53927 220 aaPredicted RBP2.1□□□□□ -2.07
CDC36YDL165W NSE5Q03718 556 aa2.1□□□□□ -2.07
CDC36YDL165W RAD33Q04231 177 aa2.1□□□□□ -2.07
CDC36YDL165W PFA4Q12006 378 aa2.1□□□□□ -2.07
CDC36YDL165W AIM41Q12032 185 aa2.1□□□□□ -2.07
CDC36YDL165W GET3Q12154 354 aaKnown RBP2.1□□□□□ -2.07
CDC36YDL165W MTC7P32633 139 aa2.09□□□□□ -2.07
CDC36YDL165W YNL092WP53934 400 aa2.09□□□□□ -2.07
CDC36YDL165W YNL058CP53947 316 aa2.09□□□□□ -2.07
CDC36YDL165W DIG1Q03063 452 aaKnown RBP2.09□□□□□ -2.07
CDC36YDL165W YCG1Q06680 1035 aa2.09□□□□□ -2.07
CDC36YDL165W SEC18P18759 758 aaKnown RBP2.08□□□□□ -2.08
CDC36YDL165W GDA1P32621 518 aa2.08□□□□□ -2.08
CDC36YDL165W EXO84P38261 753 aa2.08□□□□□ -2.08
CDC36YDL165W YND1P40009 630 aa2.08□□□□□ -2.08
CDC36YDL165W IES1P43579 692 aa2.08□□□□□ -2.08
CDC36YDL165W YPT11P48559 417 aa2.08□□□□□ -2.08
CDC36YDL165W BET4Q00618 327 aa2.08□□□□□ -2.08
CDC36YDL165W ECM16Q04217 1267 aaKnown RBP2.08□□□□□ -2.08
CDC36YDL165W CRT10Q08226 957 aa2.08□□□□□ -2.08
CDC36YDL165W MSH2P25847 964 aa2.07□□□□□ -2.08
CDC36YDL165W FAA2P39518 744 aa2.07□□□□□ -2.08
CDC36YDL165W YJL193WP39542 402 aa2.07□□□□□ -2.08
CDC36YDL165W UGO1Q03327 502 aa2.07□□□□□ -2.08
CDC36YDL165W ARA2Q04212 335 aa2.07□□□□□ -2.08
CDC36YDL165W PCK1P10963 549 aa2.06□□□□□ -2.08
CDC36YDL165W PRP16P15938 1071 aaPredicted RBP2.06□□□□□ -2.08
CDC36YDL165W VPS33P20795 691 aa2.06□□□□□ -2.08
CDC36YDL165W CNA1P23287 553 aa2.06□□□□□ -2.08
CDC36YDL165W AZF1P41696 914 aa2.06□□□□□ -2.08
CDC36YDL165W CIR1P42940 261 aa2.06□□□□□ -2.08
CDC36YDL165W MET13P53128 600 aa2.06□□□□□ -2.08
CDC36YDL165W IMP4P53941 290 aaKnown RBP2.06□□□□□ -2.08
CDC36YDL165W FCP1Q03254 732 aa2.06□□□□□ -2.08
CDC36YDL165W ECM22Q05958 814 aaPredicted RBP2.06□□□□□ -2.08
CDC36YDL165W GUD1Q07729 489 aa2.06□□□□□ -2.08
CDC36YDL165W GSH2Q08220 491 aa2.06□□□□□ -2.08
CDC36YDL165W RSA1Q08932 381 aa2.06□□□□□ -2.08
CDC36YDL165W RRI1Q12468 440 aa2.06□□□□□ -2.08
CDC36YDL165W YOR131CQ12486 218 aa2.06□□□□□ -2.08
CDC36YDL165W RPL42AP0CX27 106 aaKnown RBP2.05□□□□□ -2.08
CDC36YDL165W RPL42BP0CX28 106 aaKnown RBP2.05□□□□□ -2.08
CDC36YDL165W CDC5P32562 705 aa2.05□□□□□ -2.08
CDC36YDL165W MTD1Q02046 320 aaKnown RBP2.05□□□□□ -2.08
CDC36YDL165W LYS21Q12122 440 aaKnown RBP2.05□□□□□ -2.08
CDC36YDL165W YER175W-AQ8TGU4 54 aa2.05□□□□□ -2.08
CDC36YDL165W RTC1Q08281 1341 aa2.05□□□□□ -2.08
CDC36YDL165W HMG2P12684 1045 aa2.04□□□□□ -2.08
CDC36YDL165W SAN1P22470 610 aa2.04□□□□□ -2.08
CDC36YDL165W RKM3P38222 552 aa2.04□□□□□ -2.08
CDC36YDL165W YHR033WP38690 423 aa2.04□□□□□ -2.08
CDC36YDL165W YLR281CQ05863 155 aa2.04□□□□□ -2.08
CDC36YDL165W RAD34Q06665 692 aa2.04□□□□□ -2.08
CDC36YDL165W YOR389WQ08912 624 aa2.04□□□□□ -2.08
CDC36YDL165W TIP41Q12199 356 aa2.04□□□□□ -2.08
CDC36YDL165W Q0010Q9ZZX9 128 aa2.04□□□□□ -2.08
CDC36YDL165W BET2P20133 325 aa2.03□□□□□ -2.08
CDC36YDL165W RRP43P25359 394 aaPredicted RBP2.03□□□□□ -2.08
CDC36YDL165W DSS4P32601 143 aa2.03□□□□□ -2.08
CDC36YDL165W KES1P35844 434 aaKnown RBP2.03□□□□□ -2.08
CDC36YDL165W TDA3P38758 523 aa2.03□□□□□ -2.08
CDC36YDL165W ERV46P39727 415 aa2.03□□□□□ -2.08
CDC36YDL165W RAD26P40352 1085 aa2.03□□□□□ -2.08
CDC36YDL165W RET2P43621 546 aa2.03□□□□□ -2.08
CDC36YDL165W ZAP1P47043 880 aa2.03□□□□□ -2.08
CDC36YDL165W FMP42Q04991 504 aa2.03□□□□□ -2.08
CDC36YDL165W YLR352WQ06479 807 aa2.03□□□□□ -2.08
CDC36YDL165W YLR001CQ07895 862 aa2.03□□□□□ -2.08
CDC36YDL165W GLN4P13188 809 aaKnown RBP2.02□□□□□ -2.09
CDC36YDL165W CDC23P16522 626 aa2.02□□□□□ -2.09
CDC36YDL165W NOP2P40991 618 aaKnown RBP2.02□□□□□ -2.09
CDC36YDL165W YJL107CP42947 387 aa2.02□□□□□ -2.09
CDC36YDL165W ROK1P45818 564 aaPredicted RBP2.02□□□□□ -2.09
CDC36YDL165W YNL144CP53907 740 aa2.02□□□□□ -2.09
CDC36YDL165W SND1Q04007 877 aa2.02□□□□□ -2.09
CDC36YDL165W YLR125WQ12138 136 aa2.02□□□□□ -2.09
CDC36YDL165W RPS21BQ3E754 87 aaKnown RBP2.02□□□□□ -2.09
CDC36YDL165W TUF1P02992 437 aaKnown RBP2.01□□□□□ -2.09
CDC36YDL165W REV1P12689 985 aa2.01□□□□□ -2.09
CDC36YDL165W SEC65P29478 273 aa2.01□□□□□ -2.09
CDC36YDL165W SFP1P32432 683 aa2.01□□□□□ -2.09
CDC36YDL165W PCL6P40038 420 aa2.01□□□□□ -2.09
CDC36YDL165W NUP82P40368 713 aa2.01□□□□□ -2.09
CDC36YDL165W COG2P53271 262 aa2.01□□□□□ -2.09
CDC36YDL165W YML119WQ03208 357 aa2.01□□□□□ -2.09
CDC36YDL165W GPN2Q08726 347 aaPredicted RBP2.01□□□□□ -2.09
CDC36YDL165W CHO2P05374 869 aaKnown RBP2□□□□□ -2.09
CDC36YDL165W CDC26P14724 124 aa2□□□□□ -2.09
CDC36YDL165W MF(ALPHA)2P32435 120 aa2□□□□□ -2.09
CDC36YDL165W NIC96P34077 839 aa2□□□□□ -2.09
CDC36YDL165W TIF3P34167 436 aaKnown RBP2□□□□□ -2.09
CDC36YDL165W RMA1P36001 430 aaKnown RBP2□□□□□ -2.09
CDC36YDL165W PBP2P38151 413 aaKnown RBP RIP-Chip data2□□□□□ -2.09not detected
CDC36YDL165W SDH8P38345 138 aa2□□□□□ -2.09
CDC36YDL165W BZZ1P38822 633 aa2□□□□□ -2.09
CDC36YDL165W LAS21P40367 830 aa2□□□□□ -2.09
Retrieved 100 of 5,963 RNA–protein pairs in 43.9 ms