RNA–Protein interactions for RNA: YCR020W-B

HTL1, Transcript of Component of the RSC chromatin remodeling complex, yeastyeast

Gene HTL1, Length 237 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
HTL1YCR020W-B LYS20P48570 428 aaKnown RBP2.31□□□□□ -2.04
HTL1YCR020W-B DNM1P54861 757 aa2.31□□□□□ -2.04
HTL1YCR020W-B SNU56Q03782 492 aaKnown RBP2.31□□□□□ -2.04
HTL1YCR020W-B MTQ2Q03920 221 aaPredicted RBP2.31□□□□□ -2.04
HTL1YCR020W-B CYK3Q07533 885 aa2.31□□□□□ -2.04
HTL1YCR020W-B THI73Q07904 523 aa2.31□□□□□ -2.04
HTL1YCR020W-B HFI1Q12060 488 aa2.31□□□□□ -2.04
HTL1YCR020W-B PNO1Q99216 274 aaKnown RBP2.31□□□□□ -2.04
HTL1YCR020W-B TUF1P02992 437 aaKnown RBP2.3□□□□□ -2.04
HTL1YCR020W-B ACO1P19414 778 aaKnown RBP RIP-Chip data2.3□□□□□ -2.04not detected
HTL1YCR020W-B COQ3P27680 312 aa2.3□□□□□ -2.04
HTL1YCR020W-B DSS4P32601 143 aa2.3□□□□□ -2.04
HTL1YCR020W-B ATO2P32907 282 aa2.3□□□□□ -2.04
HTL1YCR020W-B RPT3P33298 428 aaKnown RBP2.3□□□□□ -2.04
HTL1YCR020W-B SCO2P38072 301 aa2.3□□□□□ -2.04
HTL1YCR020W-B IMD2P38697 523 aaKnown RBP2.3□□□□□ -2.04
HTL1YCR020W-B MTG2P38860 518 aa2.3□□□□□ -2.04
HTL1YCR020W-B GZF3P42944 551 aaKnown RBP2.3□□□□□ -2.04
HTL1YCR020W-B IMD3P50095 523 aaKnown RBP2.3□□□□□ -2.04
HTL1YCR020W-B SRL1Q08673 210 aa2.3□□□□□ -2.04
HTL1YCR020W-B YOR389WQ08912 624 aa2.3□□□□□ -2.04
HTL1YCR020W-B YEL076C-AP0CX16 216 aa2.29□□□□□ -2.04
HTL1YCR020W-B YLR464WP0CX17 216 aa2.29□□□□□ -2.04
HTL1YCR020W-B MNN1P39106 762 aa2.29□□□□□ -2.04
HTL1YCR020W-B YEL076CP39971 216 aa2.29□□□□□ -2.04
HTL1YCR020W-B MDV1P47025 714 aa2.29□□□□□ -2.04
HTL1YCR020W-B ENP2P48234 707 aaKnown RBP2.29□□□□□ -2.04
HTL1YCR020W-B MDR1P53258 950 aa2.29□□□□□ -2.04
HTL1YCR020W-B RPL15BP54780 204 aaPredicted RBP2.29□□□□□ -2.04
HTL1YCR020W-B RAD33Q04231 177 aa2.29□□□□□ -2.04
HTL1YCR020W-B YTM1Q12024 460 aaPredicted RBP2.29□□□□□ -2.04
HTL1YCR020W-B YCP4P25349 247 aaKnown RBP2.28□□□□□ -2.04
HTL1YCR020W-B GDA1P32621 518 aa2.28□□□□□ -2.04
HTL1YCR020W-B DID4P36108 232 aa2.28□□□□□ -2.04
HTL1YCR020W-B PEA2P40091 420 aa2.28□□□□□ -2.04
HTL1YCR020W-B MNN11P46985 422 aaKnown RBP2.28□□□□□ -2.04
HTL1YCR020W-B RNH70P53331 553 aa2.28□□□□□ -2.04
HTL1YCR020W-B ALG12P53730 551 aa2.28□□□□□ -2.04
HTL1YCR020W-B BOP3P53958 396 aa2.28□□□□□ -2.04
HTL1YCR020W-B NGL1Q08213 363 aaKnown RBP2.28□□□□□ -2.04
HTL1YCR020W-B CRT10Q08226 957 aa2.28□□□□□ -2.04
HTL1YCR020W-B NDD1Q08887 554 aa2.28□□□□□ -2.04
HTL1YCR020W-B ILS1P09436 1072 aaKnown RBP2.27□□□□□ -2.05
HTL1YCR020W-B AIM17P23180 465 aaKnown RBP2.27□□□□□ -2.05
HTL1YCR020W-B HXT4P32467 576 aa2.27□□□□□ -2.05
HTL1YCR020W-B CDC5P32562 705 aa2.27□□□□□ -2.05
HTL1YCR020W-B FTH1P38310 465 aa2.27□□□□□ -2.05
HTL1YCR020W-B GND1P38720 489 aaKnown RBP2.27□□□□□ -2.05
HTL1YCR020W-B YNL058CP53947 316 aa2.27□□□□□ -2.05
HTL1YCR020W-B RTC1Q08281 1341 aa2.26□□□□□ -2.05
HTL1YCR020W-B YPT1P01123 206 aaKnown RBP2.26□□□□□ -2.05
HTL1YCR020W-B GAL4P04386 881 aa2.26□□□□□ -2.05
HTL1YCR020W-B AEP2P22136 580 aa2.26□□□□□ -2.05
HTL1YCR020W-B RRP14P36080 434 aaKnown RBP2.26□□□□□ -2.05
HTL1YCR020W-B CIN1P40987 1014 aa2.26□□□□□ -2.05
HTL1YCR020W-B COG2P53271 262 aa2.26□□□□□ -2.05
HTL1YCR020W-B YNL092WP53934 400 aa2.26□□□□□ -2.05
HTL1YCR020W-B UBP16Q02863 499 aa2.26□□□□□ -2.05
HTL1YCR020W-B UME1Q03010 460 aa2.26□□□□□ -2.05
HTL1YCR020W-B YML119WQ03208 357 aa2.26□□□□□ -2.05
HTL1YCR020W-B NRT1Q08485 598 aa2.26□□□□□ -2.05
HTL1YCR020W-B ATX2Q12067 313 aa2.26□□□□□ -2.05
HTL1YCR020W-B APM4Q99186 491 aa2.26□□□□□ -2.05
HTL1YCR020W-B YOR111WQ99210 232 aa2.26□□□□□ -2.05
HTL1YCR020W-B NUP145P49687 1317 aa2.25□□□□□ -2.05
HTL1YCR020W-B CET1O13297 549 aaPredicted RBP2.25□□□□□ -2.05
HTL1YCR020W-B ATP12P22135 325 aa2.25□□□□□ -2.05
HTL1YCR020W-B MAK32P23060 363 aa2.25□□□□□ -2.05
HTL1YCR020W-B CIR1P42940 261 aa2.25□□□□□ -2.05
HTL1YCR020W-B RNR4P49723 345 aaKnown RBP2.25□□□□□ -2.05
HTL1YCR020W-B YGL260WP53056 76 aa2.25□□□□□ -2.05
HTL1YCR020W-B PEF1P53238 335 aa2.25□□□□□ -2.05
HTL1YCR020W-B AAT1Q01802 451 aa2.25□□□□□ -2.05
HTL1YCR020W-B MTD1Q02046 320 aaKnown RBP2.25□□□□□ -2.05
HTL1YCR020W-B PFA4Q12006 378 aa2.25□□□□□ -2.05
HTL1YCR020W-B UBX3Q12229 455 aa2.25□□□□□ -2.05
HTL1YCR020W-B NOP56Q12460 504 aaKnown RBP RIP-Chip data2.25□□□□□ -2.05not detected
HTL1YCR020W-B SEC18P18759 758 aaKnown RBP2.24□□□□□ -2.05
HTL1YCR020W-B RRP43P25359 394 aaPredicted RBP2.24□□□□□ -2.05
HTL1YCR020W-B YCR043CP25361 127 aa2.24□□□□□ -2.05
HTL1YCR020W-B DAL3P32459 195 aa2.24□□□□□ -2.05
HTL1YCR020W-B SDH8P38345 138 aa2.24□□□□□ -2.05
HTL1YCR020W-B STB5P38699 743 aa2.24□□□□□ -2.05
HTL1YCR020W-B SAP1P39955 897 aaKnown RBP2.24□□□□□ -2.05
HTL1YCR020W-B LAS21P40367 830 aa2.24□□□□□ -2.05
HTL1YCR020W-B SCW10Q04951 389 aa2.24□□□□□ -2.05
HTL1YCR020W-B YML053CQ04978 212 aa2.24□□□□□ -2.05
HTL1YCR020W-B YMR034CQ05131 434 aaPredicted RBP2.24□□□□□ -2.05
HTL1YCR020W-B ECM22Q05958 814 aaPredicted RBP2.24□□□□□ -2.05
HTL1YCR020W-B FPR4Q06205 392 aaPredicted RBP2.24□□□□□ -2.05
HTL1YCR020W-B AMD2P22580 549 aa2.23□□□□□ -2.05
HTL1YCR020W-B SER1P33330 395 aaKnown RBP2.23□□□□□ -2.05
HTL1YCR020W-B LNP1P38878 278 aa2.23□□□□□ -2.05
HTL1YCR020W-B RAD26P40352 1085 aa2.23□□□□□ -2.05
HTL1YCR020W-B TES1P41903 349 aaKnown RBP2.23□□□□□ -2.05
HTL1YCR020W-B PMT3P47190 753 aa2.23□□□□□ -2.05
HTL1YCR020W-B PLM2Q04383 521 aa2.23□□□□□ -2.05
HTL1YCR020W-B YTH1Q06102 208 aaPredicted RBP2.23□□□□□ -2.05
HTL1YCR020W-B DSE3Q08729 430 aa2.23□□□□□ -2.05
HTL1YCR020W-B FAP7Q12055 197 aaPredicted RBP2.23□□□□□ -2.05
Retrieved 100 of 5,963 RNA–protein pairs in 14.2 ms