RNA–Protein interactions for RNA: YCL005W-A

VMA9, Transcript of Vacuolar H+ ATPase subunit e of the V-ATPase V0 subcomplex, yeastyeast

Gene VMA9, Length 222 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VMA9YCL005W-A PRM2P40534 656 aa2.47□□□□□ -2.01
VMA9YCL005W-A HYR1P40581 163 aaKnown RBP2.47□□□□□ -2.01
VMA9YCL005W-A PXA1P41909 870 aa2.47□□□□□ -2.01
VMA9YCL005W-A YJR008WP47085 338 aa2.47□□□□□ -2.01
VMA9YCL005W-A YDL183CP48569 320 aa2.47□□□□□ -2.01
VMA9YCL005W-A SPC105P53148 917 aa2.47□□□□□ -2.01
VMA9YCL005W-A NMA2P53204 395 aa2.47□□□□□ -2.01
VMA9YCL005W-A CTF4Q01454 927 aa2.47□□□□□ -2.01
VMA9YCL005W-A YMR102CQ03177 834 aa2.47□□□□□ -2.01
VMA9YCL005W-A RBA50Q04418 439 aa2.47□□□□□ -2.01
VMA9YCL005W-A PHM6Q05637 104 aa2.47□□□□□ -2.01
VMA9YCL005W-A YCG1Q06680 1035 aa2.47□□□□□ -2.01
VMA9YCL005W-A DIA2Q08496 732 aaPredicted RBP2.47□□□□□ -2.01
VMA9YCL005W-A YOR378WQ08902 515 aa2.47□□□□□ -2.01
VMA9YCL005W-A RTK1Q12100 620 aaPredicted RBP2.47□□□□□ -2.01
VMA9YCL005W-A BRR1Q99177 341 aaPredicted RBP2.47□□□□□ -2.01
VMA9YCL005W-A MET5P47169 1442 aa2.47□□□□□ -2.01
VMA9YCL005W-A SES1P07284 462 aaKnown RBP2.46□□□□□ -2.02
VMA9YCL005W-A SUI3P09064 285 aaKnown RBP2.46□□□□□ -2.02
VMA9YCL005W-A DAL5P15365 543 aa2.46□□□□□ -2.02
VMA9YCL005W-A KIN82P25341 720 aa2.46□□□□□ -2.02
VMA9YCL005W-A YJU2P28320 278 aaPredicted RBP2.46□□□□□ -2.02
VMA9YCL005W-A DPH5P32469 300 aaPredicted RBP2.46□□□□□ -2.02
VMA9YCL005W-A YEL043WP32618 956 aa2.46□□□□□ -2.02
VMA9YCL005W-A SAS3P34218 831 aa2.46□□□□□ -2.02
VMA9YCL005W-A MTH1P35198 433 aa2.46□□□□□ -2.02
VMA9YCL005W-A MPE1P35728 441 aaKnown RBP2.46□□□□□ -2.02
VMA9YCL005W-A ELF1P36053 145 aa2.46□□□□□ -2.02
VMA9YCL005W-A YHL017WP38745 532 aa2.46□□□□□ -2.02
VMA9YCL005W-A RTR1P40084 226 aaPredicted RBP2.46□□□□□ -2.02
VMA9YCL005W-A KHA1P40309 873 aa2.46□□□□□ -2.02
VMA9YCL005W-A SEC9P40357 651 aa2.46□□□□□ -2.02
VMA9YCL005W-A SDS3P40505 327 aa2.46□□□□□ -2.02
VMA9YCL005W-A IRC5P43610 853 aa2.46□□□□□ -2.02
VMA9YCL005W-A SNF12P53628 566 aa2.46□□□□□ -2.02
VMA9YCL005W-A RIA1P53893 1110 aa2.46□□□□□ -2.02
VMA9YCL005W-A SMX3P54999 86 aaPredicted RBP2.46□□□□□ -2.02
VMA9YCL005W-A YMR111CQ04461 462 aaPredicted RBP2.46□□□□□ -2.02
VMA9YCL005W-A GSF2Q04697 403 aaKnown RBP2.46□□□□□ -2.02
VMA9YCL005W-A YOL057WQ08225 711 aa2.46□□□□□ -2.02
VMA9YCL005W-A YPL225WQ08971 146 aaKnown RBP2.46□□□□□ -2.02
VMA9YCL005W-A ACF2Q12168 779 aa2.46□□□□□ -2.02
VMA9YCL005W-A KAR1P11927 433 aa2.45□□□□□ -2.02
VMA9YCL005W-A HMG2P12684 1045 aa2.45□□□□□ -2.02
VMA9YCL005W-A GCD2P12754 651 aaPredicted RBP2.45□□□□□ -2.02
VMA9YCL005W-A TAL1P15019 335 aaKnown RBP2.45□□□□□ -2.02
VMA9YCL005W-A ACO1P19414 778 aaKnown RBP RIP-Chip data2.45□□□□□ -2.02not detected
VMA9YCL005W-A SUI2P20459 304 aaKnown RBP2.45□□□□□ -2.02
VMA9YCL005W-A OAR1P35731 278 aa2.45□□□□□ -2.02
VMA9YCL005W-A GRX7P38068 203 aa2.45□□□□□ -2.02
VMA9YCL005W-A OLA1P38219 394 aaKnown RBP2.45□□□□□ -2.02
VMA9YCL005W-A KSP1P38691 1029 aaKnown RBP2.45□□□□□ -2.02
VMA9YCL005W-A LIN1P38852 340 aaPredicted RBP2.45□□□□□ -2.02
VMA9YCL005W-A SHC1P39000 512 aa2.45□□□□□ -2.02
VMA9YCL005W-A CCT4P39078 528 aaKnown RBP2.45□□□□□ -2.02
VMA9YCL005W-A SWD1P39706 426 aa2.45□□□□□ -2.02
VMA9YCL005W-A NOC2P39744 710 aaKnown RBP2.45□□□□□ -2.02
VMA9YCL005W-A AIM20P40451 204 aa2.45□□□□□ -2.02
VMA9YCL005W-A YIL092WP40497 633 aa2.45□□□□□ -2.02
VMA9YCL005W-A YRB1P41920 201 aaKnown RBP2.45□□□□□ -2.02
VMA9YCL005W-A YGR151CP53287 111 aa2.45□□□□□ -2.02
VMA9YCL005W-A SPO1P53541 631 aa2.45□□□□□ -2.02
VMA9YCL005W-A SSL2Q00578 843 aa2.45□□□□□ -2.02
VMA9YCL005W-A MTD1Q02046 320 aaKnown RBP2.45□□□□□ -2.02
VMA9YCL005W-A INP2Q03824 705 aa2.45□□□□□ -2.02
VMA9YCL005W-A UBX2Q04228 584 aa2.45□□□□□ -2.02
VMA9YCL005W-A YDL086WQ07505 273 aa2.45□□□□□ -2.02
VMA9YCL005W-A IZH3Q07959 543 aa2.45□□□□□ -2.02
VMA9YCL005W-A PEX15Q08215 383 aa2.45□□□□□ -2.02
VMA9YCL005W-A MCH5Q08777 521 aa2.45□□□□□ -2.02
VMA9YCL005W-A SLX4Q12098 748 aa2.45□□□□□ -2.02
VMA9YCL005W-A MRH1Q12117 320 aaPredicted RBP2.45□□□□□ -2.02
VMA9YCL005W-A NFI1Q12216 726 aa2.45□□□□□ -2.02
VMA9YCL005W-A SUT2Q12286 268 aa2.45□□□□□ -2.02
VMA9YCL005W-A YKL068W-AQ3E826 78 aa2.45□□□□□ -2.02
VMA9YCL005W-A NUP157P40064 1391 aaKnown RBP2.45□□□□□ -2.02
VMA9YCL005W-A YML133CQ03099 1374 aa2.45□□□□□ -2.02
VMA9YCL005W-A YLL067CQ07888 1374 aa2.45□□□□□ -2.02
VMA9YCL005W-A YLL066CQ99208 1374 aa2.45□□□□□ -2.02
VMA9YCL005W-A DNA2P38859 1522 aa2.44□□□□□ -2.02
VMA9YCL005W-A URA3P03962 267 aa2.44□□□□□ -2.02
VMA9YCL005W-A NAT1P12945 854 aaKnown RBP2.44□□□□□ -2.02
VMA9YCL005W-A SEC15P22224 910 aa2.44□□□□□ -2.02
VMA9YCL005W-A PRP28P23394 588 aa2.44□□□□□ -2.02
VMA9YCL005W-A FUB1P25659 250 aa2.44□□□□□ -2.02
VMA9YCL005W-A MSH1P25846 959 aa2.44□□□□□ -2.02
VMA9YCL005W-A RPL5P26321 297 aaKnown RBP2.44□□□□□ -2.02
VMA9YCL005W-A CDC60P26637 1090 aaKnown RBP2.44□□□□□ -2.02
VMA9YCL005W-A DPB3P27344 201 aa2.44□□□□□ -2.02
VMA9YCL005W-A HIR2P32480 875 aa2.44□□□□□ -2.02
VMA9YCL005W-A RPN2P32565 945 aaKnown RBP2.44□□□□□ -2.02
VMA9YCL005W-A EMP70P32802 667 aa2.44□□□□□ -2.02
VMA9YCL005W-A SSO1P32867 290 aa2.44□□□□□ -2.02
VMA9YCL005W-A HEL1P36113 551 aa2.44□□□□□ -2.02
VMA9YCL005W-A TAF5P38129 798 aa2.44□□□□□ -2.02
VMA9YCL005W-A CTP1P38152 299 aa2.44□□□□□ -2.02
VMA9YCL005W-A FES1P38260 290 aa2.44□□□□□ -2.02
VMA9YCL005W-A MIT1P40002 666 aa2.44□□□□□ -2.02
VMA9YCL005W-A ARB1P40024 610 aaKnown RBP2.44□□□□□ -2.02
VMA9YCL005W-A YIL001WP40560 513 aa2.44□□□□□ -2.02
Retrieved 100 of 5,963 RNA–protein pairs in 10.9 ms