RNA–Protein interactions for RNA: YAL004W

YAL004W, Transcript of Dubious open reading frame, yeast

Gene YAL004W, Length 648 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
YAL004W	YAL004W	KIP1	P28742	1111 aa		3.9	□□□□□ -1.79
YAL004W	YAL004W	CNS1	P33313	385 aa		3.9	□□□□□ -1.79
YAL004W	YAL004W	ARL1	P38116	183 aa	Known RBP	3.9	□□□□□ -1.79
YAL004W	YAL004W	ALG3	P38179	458 aa		3.9	□□□□□ -1.79
YAL004W	YAL004W	YBR225W	P38321	900 aa		3.9	□□□□□ -1.79
YAL004W	YAL004W	REI1	P38344	393 aa	Predicted RBP	3.9	□□□□□ -1.79
YAL004W	YAL004W	YLF2	P38746	405 aa		3.9	□□□□□ -1.79
YAL004W	YAL004W	RTT105	P40063	208 aa		3.9	□□□□□ -1.79
YAL004W	YAL004W	LSM5	P40089	93 aa	Known RBP	3.9	□□□□□ -1.79
YAL004W	YAL004W	IMA5	P40884	581 aa		3.9	□□□□□ -1.79
YAL004W	YAL004W	GTS1	P40956	396 aa		3.9	□□□□□ -1.79
YAL004W	YAL004W	LYS14	P40971	790 aa		3.9	□□□□□ -1.79
YAL004W	YAL004W	FYV8	P46949	817 aa	Known RBP	3.9	□□□□□ -1.79
YAL004W	YAL004W	MAD3	P47074	515 aa		3.9	□□□□□ -1.79
YAL004W	YAL004W	PSP2	P50109	593 aa	Known RBP	3.9	□□□□□ -1.79
YAL004W	YAL004W	UBC9	P50623	157 aa	Predicted RBP	3.9	□□□□□ -1.79
YAL004W	YAL004W	YGR045C	P53229	120 aa		3.9	□□□□□ -1.79
YAL004W	YAL004W	ELA1	P53861	379 aa	Predicted RBP	3.9	□□□□□ -1.79
YAL004W	YAL004W	CIK1	Q01649	594 aa		3.9	□□□□□ -1.79
YAL004W	YAL004W	PRP42	Q03776	544 aa	Known RBP	3.9	□□□□□ -1.79
YAL004W	YAL004W	VPS64	Q03944	604 aa		3.9	□□□□□ -1.79
YAL004W	YAL004W	UTP5	Q04177	643 aa	Known RBP	3.9	□□□□□ -1.79
YAL004W	YAL004W	HRQ1	Q05549	1077 aa		3.9	□□□□□ -1.79
YAL004W	YAL004W	SWA2	Q06677	668 aa		3.9	□□□□□ -1.79
YAL004W	YAL004W	DIB1	Q06819	143 aa	Predicted RBP	3.9	□□□□□ -1.79
YAL004W	YAL004W	YDL073W	Q07454	984 aa		3.9	□□□□□ -1.79
YAL004W	YAL004W	MCH5	Q08777	521 aa		3.9	□□□□□ -1.79
YAL004W	YAL004W	MRN1	Q08925	612 aa	Known RBP RIP-Chip data	3.9	□□□□□ -1.79	not detected
YAL004W	YAL004W	REX3	Q12090	404 aa		3.9	□□□□□ -1.79
YAL004W	YAL004W	CFT2	Q12102	859 aa	Predicted RBP	3.9	□□□□□ -1.79
YAL004W	YAL004W	NOP56	Q12460	504 aa	Known RBP RIP-Chip data	3.9	□□□□□ -1.79	not detected
YAL004W	YAL004W	RPS21B	Q3E754	87 aa	Known RBP	3.9	□□□□□ -1.79
YAL004W	YAL004W	TUB2	P02557	457 aa	Known RBP	3.89	□□□□□ -1.79
YAL004W	YAL004W	FUM1	P08417	488 aa	Known RBP	3.89	□□□□□ -1.79
YAL004W	YAL004W	TY1A-LR4	P0C2I8	440 aa	Known RBP	3.89	□□□□□ -1.79
YAL004W	YAL004W	TY1A-DR6	P0CX70	440 aa		3.89	□□□□□ -1.79
YAL004W	YAL004W	TY1A-ER1	P0CX71	440 aa		3.89	□□□□□ -1.79
YAL004W	YAL004W	TY1A-LR2	P0CX72	440 aa		3.89	□□□□□ -1.79
YAL004W	YAL004W	TY1A-PL	P0CX73	440 aa		3.89	□□□□□ -1.79
YAL004W	YAL004W	TY1A-JR1	P0CX74	440 aa		3.89	□□□□□ -1.79
YAL004W	YAL004W	TY1A-LR3	P0CX75	440 aa		3.89	□□□□□ -1.79
YAL004W	YAL004W	TY1A-ML2	P0CX76	440 aa		3.89	□□□□□ -1.79
YAL004W	YAL004W	REC107	P21651	314 aa		3.89	□□□□□ -1.79
YAL004W	YAL004W	UBC1	P21734	215 aa	Known RBP	3.89	□□□□□ -1.79
YAL004W	YAL004W	SRO9	P25567	434 aa	Known RBP	3.89	□□□□□ -1.79
YAL004W	YAL004W	SEC65	P29478	273 aa		3.89	□□□□□ -1.79
YAL004W	YAL004W	ERG3	P32353	365 aa		3.89	□□□□□ -1.79
YAL004W	YAL004W	CDC12	P32468	407 aa	Known RBP	3.89	□□□□□ -1.79
YAL004W	YAL004W	UTP9	P38882	575 aa	Known RBP	3.89	□□□□□ -1.79
YAL004W	YAL004W	NPR2	P39923	615 aa		3.89	□□□□□ -1.79
YAL004W	YAL004W	GDI1	P39958	451 aa	Known RBP	3.89	□□□□□ -1.79
YAL004W	YAL004W	PCL7	P40186	285 aa		3.89	□□□□□ -1.79
YAL004W	YAL004W	PSF2	P40359	213 aa		3.89	□□□□□ -1.79
YAL004W	YAL004W	SEC28	P40509	296 aa	Known RBP	3.89	□□□□□ -1.79
YAL004W	YAL004W	POL31	P46957	487 aa		3.89	□□□□□ -1.79
YAL004W	YAL004W	ALY2	P47029	1046 aa		3.89	□□□□□ -1.79
YAL004W	YAL004W	MDE1	P47095	244 aa		3.89	□□□□□ -1.79
YAL004W	YAL004W	NPA3	P47122	385 aa		3.89	□□□□□ -1.79
YAL004W	YAL004W	CPR6	P53691	371 aa	Known RBP	3.89	□□□□□ -1.79
YAL004W	YAL004W	SFB2	P53953	876 aa		3.89	□□□□□ -1.79
YAL004W	YAL004W	UBP16	Q02863	499 aa		3.89	□□□□□ -1.79
YAL004W	YAL004W	PEX25	Q02969	394 aa		3.89	□□□□□ -1.79
YAL004W	YAL004W	RKM2	Q03942	479 aa		3.89	□□□□□ -1.79
YAL004W	YAL004W	YLH47	Q06493	454 aa		3.89	□□□□□ -1.79
YAL004W	YAL004W	APC5	Q08683	685 aa		3.89	□□□□□ -1.79
YAL004W	YAL004W	TRM8	Q12009	286 aa		3.89	□□□□□ -1.79
YAL004W	YAL004W	CWC2	Q12046	339 aa	Predicted RBP	3.89	□□□□□ -1.79
YAL004W	YAL004W	TY1A-GR1	Q12085	440 aa		3.89	□□□□□ -1.79
YAL004W	YAL004W	PSF3	Q12146	194 aa		3.89	□□□□□ -1.79
YAL004W	YAL004W	PAR32	Q12515	295 aa	Known RBP	3.89	□□□□□ -1.79
YAL004W	YAL004W	PGA3	Q12746	312 aa	Known RBP	3.89	□□□□□ -1.79
YAL004W	YAL004W	TY1A-PR3	Q6Q5H1	440 aa	Known RBP	3.89	□□□□□ -1.79
YAL004W	YAL004W	TY1A-OL	Q92392	440 aa	Known RBP	3.89	□□□□□ -1.79
YAL004W	YAL004W	PHO5	P00635	467 aa		3.88	□□□□□ -1.79
YAL004W	YAL004W	TUF1	P02992	437 aa	Known RBP	3.88	□□□□□ -1.79
YAL004W	YAL004W	GCN4	P03069	281 aa		3.88	□□□□□ -1.79
YAL004W	YAL004W	MET17	P06106	444 aa		3.88	□□□□□ -1.79
YAL004W	YAL004W	BIK1	P11709	440 aa		3.88	□□□□□ -1.79
YAL004W	YAL004W	NCP1	P16603	691 aa	Known RBP	3.88	□□□□□ -1.79
YAL004W	YAL004W	ATP12	P22135	325 aa		3.88	□□□□□ -1.79
YAL004W	YAL004W	APN1	P22936	367 aa		3.88	□□□□□ -1.79
YAL004W	YAL004W	GPI10	P30777	616 aa		3.88	□□□□□ -1.79
YAL004W	YAL004W	AFR1	P33304	620 aa		3.88	□□□□□ -1.79
YAL004W	YAL004W	MDL2	P33311	773 aa		3.88	□□□□□ -1.79
YAL004W	YAL004W	MRPL36	P36531	177 aa		3.88	□□□□□ -1.79
YAL004W	YAL004W	NEM1	P38757	446 aa		3.88	□□□□□ -1.79
YAL004W	YAL004W	YHR202W	P38887	602 aa		3.88	□□□□□ -1.79
YAL004W	YAL004W	VPS41	P38959	992 aa		3.88	□□□□□ -1.79
YAL004W	YAL004W	DUN1	P39009	513 aa		3.88	□□□□□ -1.79
YAL004W	YAL004W	YEL025C	P39991	1188 aa		3.88	□□□□□ -1.79
YAL004W	YAL004W	PUG1	P40100	303 aa		3.88	□□□□□ -1.79
YAL004W	YAL004W	CTF18	P49956	741 aa		3.88	□□□□□ -1.79
YAL004W	YAL004W	NNF2	P53253	936 aa		3.88	□□□□□ -1.79
YAL004W	YAL004W	YGR250C	P53316	781 aa	Known RBP	3.88	□□□□□ -1.79
YAL004W	YAL004W	OGG1	P53397	376 aa	Predicted RBP	3.88	□□□□□ -1.79
YAL004W	YAL004W	ARE2	P53629	642 aa	Known RBP	3.88	□□□□□ -1.79
YAL004W	YAL004W	BNI5	P53890	448 aa	Known RBP	3.88	□□□□□ -1.79
YAL004W	YAL004W	RPT6	Q01939	405 aa	Known RBP	3.88	□□□□□ -1.79
YAL004W	YAL004W	YML119W	Q03208	357 aa		3.88	□□□□□ -1.79
YAL004W	YAL004W	RAD33	Q04231	177 aa		3.88	□□□□□ -1.79

Retrieved 100 of 5,963 RNA–protein pairs in 17.3 ms