RNA–Protein interactions for RNA: ENST00000624403.1

ATRX-216, Transcript of ATRX, chromatin remodeler, humanhuman

TSL 3

Gene ATRX, Length 583 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATRX-216ENST00000624403 EPB41L4AQ9HCS5 686 aaPredicted RBP12.26□□□□□ -0.45
ATRX-216ENST00000624403 CD209Q9NNX6 404 aa12.26□□□□□ -0.45
ATRX-216ENST00000624403 SALL1Q9NSC2 1324 aa12.26□□□□□ -0.45
ATRX-216ENST00000624403 CACNA1SQ13698 1873 aa12.25□□□□□ -0.45
ATRX-216ENST00000624403 GSG1L2A8MUP6 293 aa12.25□□□□□ -0.45
ATRX-216ENST00000624403 ZNF213O14771 459 aa12.25□□□□□ -0.45
ATRX-216ENST00000624403 PRKAB2O43741 272 aa12.25□□□□□ -0.45
ATRX-216ENST00000624403 IL1R1P14778 569 aa12.25□□□□□ -0.45
ATRX-216ENST00000624403 GNAT2P19087 354 aa12.25□□□□□ -0.45
ATRX-216ENST00000624403 CHRNA5P30532 468 aa12.25□□□□□ -0.45
ATRX-216ENST00000624403 ANKRD1Q15327 319 aa12.25□□□□□ -0.45
ATRX-216ENST00000624403 SPTY2D1Q68D10 685 aaPredicted RBP12.25□□□□□ -0.45
ATRX-216ENST00000624403 DHX32Q7L7V1 743 aaKnown RBP12.25□□□□□ -0.45
ATRX-216ENST00000624403 MPNDQ8N594 471 aa12.25□□□□□ -0.45
ATRX-216ENST00000624403 WDR66Q8TBY9 1149 aa12.25□□□□□ -0.45
ATRX-216ENST00000624403 NBPF3Q9H094 633 aa12.25□□□□□ -0.45
ATRX-216ENST00000624403 SH2B1Q9NRF2 756 aaPredicted RBP12.25□□□□□ -0.45
ATRX-216ENST00000624403 TPCN1Q9ULQ1 816 aa12.25□□□□□ -0.45
ATRX-216ENST00000624403 SLC4A4Q9Y6R1 1079 aa12.25□□□□□ -0.45
ATRX-216ENST00000624403 ZMYM6O95789 1325 aa12.25□□□□□ -0.45
ATRX-216ENST00000624403 PRDX5P30044 214 aa12.24□□□□□ -0.45
ATRX-216ENST00000624403 PBX2P40425 430 aa12.24□□□□□ -0.45
ATRX-216ENST00000624403 DYNLL1P63167 89 aaKnown RBP12.24□□□□□ -0.45
ATRX-216ENST00000624403 EXOSC10Q01780 885 aaKnown RBP12.24□□□□□ -0.45
ATRX-216ENST00000624403 RAB3GAP1Q15042 981 aa12.24□□□□□ -0.45
ATRX-216ENST00000624403 ME3Q16798 604 aa12.24□□□□□ -0.45
ATRX-216ENST00000624403 DPP8Q6V1X1 898 aaPredicted RBP12.24□□□□□ -0.45
ATRX-216ENST00000624403 Q6ZUG5 572 aa12.24□□□□□ -0.45
ATRX-216ENST00000624403 TBC1D10CQ8IV04 446 aa12.24□□□□□ -0.45
ATRX-216ENST00000624403 IFNL3Q8IZI9 196 aa12.24□□□□□ -0.45
ATRX-216ENST00000624403 RIOK1Q9BRS2 568 aaKnown RBP12.24□□□□□ -0.45
ATRX-216ENST00000624403 DUOX1Q9NRD9 1551 aa12.24□□□□□ -0.45
ATRX-216ENST00000624403 C10orf71Q711Q0 1435 aa12.23□□□□□ -0.45
ATRX-216ENST00000624403 IGSF3O75054 1194 aa12.23□□□□□ -0.45
ATRX-216ENST00000624403 LDHBP07195 334 aaKnown RBP12.23□□□□□ -0.45
ATRX-216ENST00000624403 ST3GAL1Q11201 340 aa12.23□□□□□ -0.45
ATRX-216ENST00000624403 TMED8Q6PL24 325 aaPredicted RBP12.23□□□□□ -0.45
ATRX-216ENST00000624403 DZIP1Q86YF9 867 aaKnown RBP12.23□□□□□ -0.45
ATRX-216ENST00000624403 SLC16A10Q8TF71 515 aa12.23□□□□□ -0.45
ATRX-216ENST00000624403 CNKSR1Q969H4 720 aa12.23□□□□□ -0.45
ATRX-216ENST00000624403 LRRC2Q9BYS8 371 aa12.23□□□□□ -0.45
ATRX-216ENST00000624403 NACAP1Q9BZK3 213 aa12.23□□□□□ -0.45
ATRX-216ENST00000624403 NAPBQ9H115 298 aa12.23□□□□□ -0.45
ATRX-216ENST00000624403 TMX4Q9H1E5 349 aaPredicted RBP12.23□□□□□ -0.45
ATRX-216ENST00000624403 MYH13Q9UKX3 1938 aa12.23□□□□□ -0.45
ATRX-216ENST00000624403 MAST2Q6P0Q8 1798 aa12.23□□□□□ -0.45
ATRX-216ENST00000624403 EVI5O60447 810 aa12.22□□□□□ -0.45
ATRX-216ENST00000624403 TDO2P48775 406 aa12.22□□□□□ -0.45
ATRX-216ENST00000624403 MAP3K9P80192 1104 aa12.22□□□□□ -0.45
ATRX-216ENST00000624403 NUCB2P80303 420 aa12.22□□□□□ -0.45
ATRX-216ENST00000624403 GRIK5Q16478 980 aa12.22□□□□□ -0.45
ATRX-216ENST00000624403 PPP4R3BQ5MIZ7 849 aa12.22□□□□□ -0.45
ATRX-216ENST00000624403 CCDC83Q8IWF9 413 aa12.22□□□□□ -0.45
ATRX-216ENST00000624403 MB21D2Q8IYB1 491 aaPredicted RBP12.22□□□□□ -0.45
ATRX-216ENST00000624403 NECAB1Q8N987 351 aa12.22□□□□□ -0.45
ATRX-216ENST00000624403 TNPO1Q92973 898 aaKnown RBP12.22□□□□□ -0.45
ATRX-216ENST00000624403 COA1Q9GZY4 146 aa12.22□□□□□ -0.45
ATRX-216ENST00000624403 FAM205AQ6ZU69 1335 aa12.21□□□□□ -0.45
ATRX-216ENST00000624403 ARHGAP33O14559 1287 aa12.21□□□□□ -0.45
ATRX-216ENST00000624403 GSTO1P78417 241 aa12.21□□□□□ -0.45
ATRX-216ENST00000624403 FGD1P98174 961 aa12.21□□□□□ -0.45
ATRX-216ENST00000624403 PKP1Q13835 747 aa12.21□□□□□ -0.45
ATRX-216ENST00000624403 CHST3Q7LGC8 479 aa12.21□□□□□ -0.45
ATRX-216ENST00000624403 NCOA7Q8NI08 942 aa12.21□□□□□ -0.45
ATRX-216ENST00000624403 SDR42E1Q8WUS8 393 aa12.21□□□□□ -0.45
ATRX-216ENST00000624403 BRF1Q92994 677 aa12.21□□□□□ -0.45
ATRX-216ENST00000624403 AGXT2Q9BYV1 514 aa12.21□□□□□ -0.45
ATRX-216ENST00000624403 ZC3H12CQ9C0D7 883 aaKnown RBP12.21□□□□□ -0.45
ATRX-216ENST00000624403 ZSCAN21Q9Y5A6 473 aaPredicted RBP12.21□□□□□ -0.45
ATRX-216ENST00000624403 LAMA4Q16363 1823 aa12.21□□□□□ -0.46
ATRX-216ENST00000624403 PRC1O43663 620 aa12.2□□□□□ -0.46
ATRX-216ENST00000624403 MCM5P33992 734 aa12.2□□□□□ -0.46
ATRX-216ENST00000624403 PSEN2P49810 448 aa12.2□□□□□ -0.46
ATRX-216ENST00000624403 ANTXR2P58335 489 aa12.2□□□□□ -0.46
ATRX-216ENST00000624403 CTDSPL2Q05D32 466 aa12.2□□□□□ -0.46
ATRX-216ENST00000624403 RALYLQ86SE5 291 aaKnown RBP12.2□□□□□ -0.46
ATRX-216ENST00000624403 ZNF454Q8N9F8 522 aa12.2□□□□□ -0.46
ATRX-216ENST00000624403 C7orf43Q8WVR3 580 aa12.2□□□□□ -0.46
ATRX-216ENST00000624403 EYA3Q99504 573 aa12.2□□□□□ -0.46
ATRX-216ENST00000624403 AATFQ9NY61 560 aaKnown RBP eCLIP12.2□□□□□ -0.46
ATRX-216ENST00000624403 SMC3Q9UQE7 1217 aa12.2□□□□□ -0.46
ATRX-216ENST00000624403 ZDHHC9Q9Y397 364 aa12.2□□□□□ -0.46
ATRX-216ENST00000624403 TACC3Q9Y6A5 838 aa12.2□□□□□ -0.46
ATRX-216ENST00000624403 TIAM2Q8IVF5 1701 aa12.2□□□□□ -0.46
ATRX-216ENST00000624403 NEDD4P46934 1319 aa12.19□□□□□ -0.46
ATRX-216ENST00000624403 WDR19Q8NEZ3 1342 aa12.19□□□□□ -0.46
ATRX-216ENST00000624403 SLX4Q8IY92 1834 aa12.19□□□□□ -0.46
ATRX-216ENST00000624403 GTF2IP78347 998 aa12.19□□□□□ -0.46
ATRX-216ENST00000624403 APOBRQ0VD83 1088 aa12.19□□□□□ -0.46
ATRX-216ENST00000624403 TRDNQ13061 729 aa12.19□□□□□ -0.46
ATRX-216ENST00000624403 STK3Q13188 491 aa12.19□□□□□ -0.46
ATRX-216ENST00000624403 CYB5R4Q7L1T6 521 aa12.19□□□□□ -0.46
ATRX-216ENST00000624403 FBXL16Q8N461 479 aa12.19□□□□□ -0.46
ATRX-216ENST00000624403 NKX2-3Q8TAU0 364 aa12.19□□□□□ -0.46
ATRX-216ENST00000624403 TBC1D22AQ8WUA7 517 aa12.19□□□□□ -0.46
ATRX-216ENST00000624403 CRNKL1Q9BZJ0 848 aaKnown RBP12.19□□□□□ -0.46
ATRX-216ENST00000624403 INCENPQ9NQS7 918 aa12.19□□□□□ -0.46
ATRX-216ENST00000624403 MROH7-TTC4A0A0A0MT08 1334 aa12.18□□□□□ -0.46
ATRX-216ENST00000624403 B4E1Z4 1266 aa12.18□□□□□ -0.46
ATRX-216ENST00000624403 DTNBO60941 627 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms