RNA–Protein interactions for RNA: ENST00000568740.5

TCF4-241, Transcript of transcription factor 4, humanhuman

TSL 5 BASIC

Gene TCF4, Length 2,628 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-241ENST00000568740 MTA3Q9BTC8 594 aa10.09□□□□□ -0.79
TCF4-241ENST00000568740 SENP2Q9HC62 589 aa10.09□□□□□ -0.79
TCF4-241ENST00000568740 DDX60Q8IY21 1712 aaKnown RBP10.09□□□□□ -0.79
TCF4-241ENST00000568740 RPAP1Q9BWH6 1393 aaPredicted RBP10.09□□□□□ -0.79
TCF4-241ENST00000568740 TCRBV5S4A2TA0A5A2 114 aa10.09□□□□□ -0.79
TCF4-241ENST00000568740 SYT1P21579 422 aa10.09□□□□□ -0.79
TCF4-241ENST00000568740 MCM2P49736 904 aa10.09□□□□□ -0.79
TCF4-241ENST00000568740 CCDC144CPQ8IYA2 1237 aa10.09□□□□□ -0.79
TCF4-241ENST00000568740 ZNF384Q8TF68 577 aa10.09□□□□□ -0.79
TCF4-241ENST00000568740 PPIL4Q8WUA2 492 aaKnown RBP eCLIP10.09□□□□□ -0.79
TCF4-241ENST00000568740 NBPF3Q9H094 633 aa10.09□□□□□ -0.79
TCF4-241ENST00000568740 TACC3Q9Y6A5 838 aa10.09□□□□□ -0.79
TCF4-241ENST00000568740 C4BP0C0L5 1744 aa10.08□□□□□ -0.8
TCF4-241ENST00000568740 MMP10P09238 476 aa10.08□□□□□ -0.8
TCF4-241ENST00000568740 MAP3K12Q12852 859 aa10.08□□□□□ -0.8
TCF4-241ENST00000568740 GLIPR1L2Q4G1C9 344 aa10.08□□□□□ -0.8
TCF4-241ENST00000568740 TBC1D10CQ8IV04 446 aa10.08□□□□□ -0.8
TCF4-241ENST00000568740 STRBPQ96SI9 672 aaKnown RBP10.08□□□□□ -0.8
TCF4-241ENST00000568740 DSCC1Q9BVC3 393 aa10.08□□□□□ -0.8
TCF4-241ENST00000568740 EPB41L4AQ9HCS5 686 aaPredicted RBP10.08□□□□□ -0.8
TCF4-241ENST00000568740 NHSQ6T4R5 1651 aa10.08□□□□□ -0.8
TCF4-241ENST00000568740 SBF2Q86WG5 1849 aa10.08□□□□□ -0.8
TCF4-241ENST00000568740 ZNF804BA4D1E1 1349 aa10.08□□□□□ -0.8
TCF4-241ENST00000568740 MINDY4BA8MYZ0 360 aa10.08□□□□□ -0.8
TCF4-241ENST00000568740 B4E1Z4 1266 aa10.08□□□□□ -0.8
TCF4-241ENST00000568740 POLRMTO00411 1230 aaKnown RBP10.08□□□□□ -0.8
TCF4-241ENST00000568740 ZNF213O14771 459 aa10.08□□□□□ -0.8
TCF4-241ENST00000568740 ERCC3P19447 782 aa10.08□□□□□ -0.8
TCF4-241ENST00000568740 HIBADHP31937 336 aaKnown RBP10.08□□□□□ -0.8
TCF4-241ENST00000568740 APLP1P51693 650 aa10.08□□□□□ -0.8
TCF4-241ENST00000568740 GPSM2P81274 684 aa10.08□□□□□ -0.8
TCF4-241ENST00000568740 SLC27A3Q5K4L6 730 aa10.08□□□□□ -0.8
TCF4-241ENST00000568740 NOP9Q86U38 636 aaKnown RBP10.08□□□□□ -0.8
TCF4-241ENST00000568740 MTMR14Q8NCE2 650 aa10.08□□□□□ -0.8
TCF4-241ENST00000568740 TM6SF1Q9BZW5 370 aa10.08□□□□□ -0.8
TCF4-241ENST00000568740 MAGEC2Q9UBF1 373 aaPredicted RBP10.08□□□□□ -0.8
TCF4-241ENST00000568740 SLC4A4Q9Y6R1 1079 aa10.08□□□□□ -0.8
TCF4-241ENST00000568740 COL1A1P02452 1464 aaPredicted RBP10.08□□□□□ -0.8
TCF4-241ENST00000568740 TLDC2A0PJX2 215 aa10.07□□□□□ -0.8
TCF4-241ENST00000568740 DCAF8L1A6NGE4 600 aa10.07□□□□□ -0.8
TCF4-241ENST00000568740 PRDM1O75626 825 aa10.07□□□□□ -0.8
TCF4-241ENST00000568740 KIF4AO95239 1232 aa10.07□□□□□ -0.8
TCF4-241ENST00000568740 GUCY1B3Q02153 619 aa10.07□□□□□ -0.8
TCF4-241ENST00000568740 TTF1Q15361 905 aaPredicted RBP10.07□□□□□ -0.8
TCF4-241ENST00000568740 GBP4Q96PP9 640 aa10.07□□□□□ -0.8
TCF4-241ENST00000568740 MYL10Q9BUA6 226 aa10.07□□□□□ -0.8
TCF4-241ENST00000568740 C6orf229H3BNL8 230 aa10.07□□□□□ -0.8
TCF4-241ENST00000568740 NUCB2P80303 420 aa10.07□□□□□ -0.8
TCF4-241ENST00000568740 UBE4AQ14139 1066 aa10.07□□□□□ -0.8
TCF4-241ENST00000568740 DIXDC1Q155Q3 683 aa10.07□□□□□ -0.8
TCF4-241ENST00000568740 IMMTQ16891 758 aaKnown RBP10.07□□□□□ -0.8
TCF4-241ENST00000568740 TSNAXIP1Q2TAA8 658 aa10.07□□□□□ -0.8
TCF4-241ENST00000568740 KRBA2Q6ZNG9 492 aa10.07□□□□□ -0.8
TCF4-241ENST00000568740 GJB4Q9NTQ9 266 aa10.07□□□□□ -0.8
TCF4-241ENST00000568740 AATFQ9NY61 560 aaKnown RBP eCLIP10.07□□□□□ -0.8
TCF4-241ENST00000568740 UFL1O94874 794 aa10.06□□□□□ -0.8
TCF4-241ENST00000568740 ZFYP08048 801 aaPredicted RBP10.06□□□□□ -0.8
TCF4-241ENST00000568740 PYGBP11216 843 aa10.06□□□□□ -0.8
TCF4-241ENST00000568740 ERCC5P28715 1186 aaPredicted RBP10.06□□□□□ -0.8
TCF4-241ENST00000568740 ST5P78524 1137 aa10.06□□□□□ -0.8
TCF4-241ENST00000568740 SCRN1Q12765 414 aa10.06□□□□□ -0.8
TCF4-241ENST00000568740 GRAPQ13588 217 aa10.06□□□□□ -0.8
TCF4-241ENST00000568740 DHX32Q7L7V1 743 aaKnown RBP10.06□□□□□ -0.8
TCF4-241ENST00000568740 IFNL3Q8IZI9 196 aa10.06□□□□□ -0.8
TCF4-241ENST00000568740 GRAPLQ8TC17 118 aaPredicted RBP10.06□□□□□ -0.8
TCF4-241ENST00000568740 IL17RAQ96F46 866 aa10.06□□□□□ -0.8
TCF4-241ENST00000568740 AKAP11Q9UKA4 1901 aa10.06□□□□□ -0.8
TCF4-241ENST00000568740 GSG1L2A8MUP6 293 aa10.06□□□□□ -0.8
TCF4-241ENST00000568740 EPB41L2O43491 1005 aaKnown RBP10.06□□□□□ -0.8
TCF4-241ENST00000568740 TDO2P48775 406 aa10.06□□□□□ -0.8
TCF4-241ENST00000568740 UBE3CQ15386 1083 aa10.06□□□□□ -0.8
TCF4-241ENST00000568740 OTUD7BQ6GQQ9 843 aa10.06□□□□□ -0.8
TCF4-241ENST00000568740 CYB5R4Q7L1T6 521 aa10.06□□□□□ -0.8
TCF4-241ENST00000568740 ZNF622Q969S3 477 aaKnown RBP eCLIP10.06□□□□□ -0.82e-6■■■□□ 17.7
TCF4-241ENST00000568740 MXD3Q9BW11 206 aa10.06□□□□□ -0.8
TCF4-241ENST00000568740 NAPBQ9H115 298 aa10.06□□□□□ -0.8
TCF4-241ENST00000568740 DDX49Q9Y6V7 483 aaKnown RBP10.06□□□□□ -0.8
TCF4-241ENST00000568740 F8W031 263 aaPredicted RBP10.05□□□□□ -0.8
TCF4-241ENST00000568740 UBE2Q2LH0YL09 131 aa10.05□□□□□ -0.8
TCF4-241ENST00000568740 STX6O43752 255 aa10.05□□□□□ -0.8
TCF4-241ENST00000568740 GADD45BO75293 160 aaPredicted RBP10.05□□□□□ -0.8
TCF4-241ENST00000568740 ANTXR2P58335 489 aa10.05□□□□□ -0.8
TCF4-241ENST00000568740 MECOMQ03112 1051 aa10.05□□□□□ -0.8
TCF4-241ENST00000568740 LARP1BQ659C4 914 aaKnown RBP10.05□□□□□ -0.8
TCF4-241ENST00000568740 CDC37L1Q7L3B6 337 aa10.05□□□□□ -0.8
TCF4-241ENST00000568740 DHX38Q92620 1227 aaKnown RBP10.05□□□□□ -0.8
TCF4-241ENST00000568740 ZNF512BQ96KM6 892 aaPredicted RBP10.05□□□□□ -0.8
TCF4-241ENST00000568740 RRAGDQ9NQL2 400 aaPredicted RBP10.05□□□□□ -0.8
TCF4-241ENST00000568740 POLLQ9UGP5 575 aa10.05□□□□□ -0.8
TCF4-241ENST00000568740 CNPY2Q9Y2B0 182 aa10.05□□□□□ -0.8
TCF4-241ENST00000568740 NEDD4P46934 1319 aa10.05□□□□□ -0.8
TCF4-241ENST00000568740 PRC1O43663 620 aa10.05□□□□□ -0.8
TCF4-241ENST00000568740 CHRNA5P30532 468 aa10.05□□□□□ -0.8
TCF4-241ENST00000568740 LRRFIP1Q32MZ4 808 aaKnown RBP10.05□□□□□ -0.8
TCF4-241ENST00000568740 CCDC144BQ3MJ40 725 aa10.05□□□□□ -0.8
TCF4-241ENST00000568740 TSGA10IPQ3SY00 556 aa10.05□□□□□ -0.8
TCF4-241ENST00000568740 SDE2Q6IQ49 451 aa10.05□□□□□ -0.8
TCF4-241ENST00000568740 ZSCAN25Q6NSZ9 544 aa10.05□□□□□ -0.8
TCF4-241ENST00000568740 FBXO33Q7Z6M2 555 aa10.05□□□□□ -0.8
TCF4-241ENST00000568740 AKT1S1Q96B36 256 aa10.05□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms