RNA–Protein interactions for RNA: ENST00000561691.5

TUBGCP4-202, Transcript of tubulin gamma complex associated protein 4, humanhuman

TSL 1 (best)

Gene TUBGCP4, Length 1,928 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBGCP4-202ENST00000561691 BRIP1Q9BX63 1249 aa11.98□□□□□ -0.49
TUBGCP4-202ENST00000561691 POLLQ9UGP5 575 aa11.98□□□□□ -0.49
TUBGCP4-202ENST00000561691 ANGEL1Q9UNK9 670 aaKnown RBP11.98□□□□□ -0.49
TUBGCP4-202ENST00000561691 COL11A2P13942 1736 aaPredicted RBP11.98□□□□□ -0.49
TUBGCP4-202ENST00000561691 NID2Q14112 1375 aa11.98□□□□□ -0.49
TUBGCP4-202ENST00000561691 NPHP1O15259 732 aa11.98□□□□□ -0.49
TUBGCP4-202ENST00000561691 ILDR1Q86SU0 546 aaPredicted RBP11.98□□□□□ -0.49
TUBGCP4-202ENST00000561691 ANKIB1Q9P2G1 1089 aa11.98□□□□□ -0.49
TUBGCP4-202ENST00000561691 JAG2Q9Y219 1238 aa11.98□□□□□ -0.49
TUBGCP4-202ENST00000561691 CHD4Q14839 1912 aa11.97□□□□□ -0.49
TUBGCP4-202ENST00000561691 PPFIA3O75145 1194 aa11.97□□□□□ -0.49
TUBGCP4-202ENST00000561691 MBD3O95983 291 aa11.97□□□□□ -0.49
TUBGCP4-202ENST00000561691 IL1R1P14778 569 aa11.97□□□□□ -0.49
TUBGCP4-202ENST00000561691 HMGN5P82970 282 aaKnown RBP11.97□□□□□ -0.49
TUBGCP4-202ENST00000561691 PPARAQ07869 468 aa11.97□□□□□ -0.49
TUBGCP4-202ENST00000561691 CHAF1AQ13111 956 aaPredicted RBP11.97□□□□□ -0.49
TUBGCP4-202ENST00000561691 TAF3Q5VWG9 929 aa11.97□□□□□ -0.49
TUBGCP4-202ENST00000561691 APOA5Q6Q788 366 aa11.97□□□□□ -0.49
TUBGCP4-202ENST00000561691 TTC6Q86TZ1 520 aa11.97□□□□□ -0.49
TUBGCP4-202ENST00000561691 NLGN1Q8N2Q7 840 aa11.97□□□□□ -0.49
TUBGCP4-202ENST00000561691 TMEM87BQ96K49 555 aa11.97□□□□□ -0.49
TUBGCP4-202ENST00000561691 MKRN1Q9UHC7 482 aaKnown RBP11.97□□□□□ -0.49
TUBGCP4-202ENST00000561691 CYP2D7A0A087X1C5 515 aa11.96□□□□□ -0.49
TUBGCP4-202ENST00000561691 GOLGA8BA8MQT2 603 aa11.96□□□□□ -0.49
TUBGCP4-202ENST00000561691 KDM4AO75164 1064 aa11.96□□□□□ -0.49
TUBGCP4-202ENST00000561691 SRGNP10124 158 aa11.96□□□□□ -0.49
TUBGCP4-202ENST00000561691 ATP2B4P23634 1241 aa11.96□□□□□ -0.49
TUBGCP4-202ENST00000561691 CDC27P30260 824 aa11.96□□□□□ -0.49
TUBGCP4-202ENST00000561691 LIFRP42702 1097 aa11.96□□□□□ -0.49
TUBGCP4-202ENST00000561691 TDO2P48775 406 aa11.96□□□□□ -0.49
TUBGCP4-202ENST00000561691 NTRK3Q16288 839 aa11.96□□□□□ -0.49
TUBGCP4-202ENST00000561691 GIMAP6Q6P9H5 292 aa11.96□□□□□ -0.49
TUBGCP4-202ENST00000561691 CTR9Q6PD62 1173 aa11.96□□□□□ -0.49
TUBGCP4-202ENST00000561691 TMED8Q6PL24 325 aaPredicted RBP11.96□□□□□ -0.49
TUBGCP4-202ENST00000561691 RAB11FIP4Q86YS3 637 aa11.96□□□□□ -0.49
TUBGCP4-202ENST00000561691 TBC1D16Q8TBP0 767 aa11.96□□□□□ -0.49
TUBGCP4-202ENST00000561691 NACAP1Q9BZK3 213 aa11.96□□□□□ -0.49
TUBGCP4-202ENST00000561691 ATP6V1DQ9Y5K8 247 aa11.96□□□□□ -0.49
TUBGCP4-202ENST00000561691 IGSF3O75054 1194 aa11.96□□□□□ -0.5
TUBGCP4-202ENST00000561691 HMGB2P26583 209 aaKnown RBP11.96□□□□□ -0.5
TUBGCP4-202ENST00000561691 TRDNQ13061 729 aa11.96□□□□□ -0.5
TUBGCP4-202ENST00000561691 ZNF710Q8N1W2 664 aa11.96□□□□□ -0.5
TUBGCP4-202ENST00000561691 MYRIPQ8NFW9 859 aa11.96□□□□□ -0.5
TUBGCP4-202ENST00000561691 CAMKK2Q96RR4 588 aa11.96□□□□□ -0.5
TUBGCP4-202ENST00000561691 CD209Q9NNX6 404 aa11.96□□□□□ -0.5
TUBGCP4-202ENST00000561691 DDX52Q9Y2R4 599 aaKnown RBP eCLIP11.96□□□□□ -0.5
TUBGCP4-202ENST00000561691 FIBPO43427 364 aa11.95□□□□□ -0.5
TUBGCP4-202ENST00000561691 UFL1O94874 794 aa11.95□□□□□ -0.5
TUBGCP4-202ENST00000561691 SEC23AQ15436 765 aa11.95□□□□□ -0.5
TUBGCP4-202ENST00000561691 MFSD6Q6ZSS7 791 aa11.95□□□□□ -0.5
TUBGCP4-202ENST00000561691 SP8Q8IXZ3 490 aa11.95□□□□□ -0.5
TUBGCP4-202ENST00000561691 MTA3Q9BTC8 594 aa11.95□□□□□ -0.5
TUBGCP4-202ENST00000561691 CNNM2Q9H8M5 875 aa11.95□□□□□ -0.5
TUBGCP4-202ENST00000561691 DCP1AQ9NPI6 582 aaPredicted RBP11.95□□□□□ -0.5
TUBGCP4-202ENST00000561691 ELP1O95163 1332 aa11.94□□□□□ -0.5
TUBGCP4-202ENST00000561691 RANBP6O60518 1105 aaKnown RBP11.94□□□□□ -0.5
TUBGCP4-202ENST00000561691 MMP10P09238 476 aa11.94□□□□□ -0.5
TUBGCP4-202ENST00000561691 UBE2HP62256 183 aa11.94□□□□□ -0.5
TUBGCP4-202ENST00000561691 OLFM4Q6UX06 510 aa11.94□□□□□ -0.5
TUBGCP4-202ENST00000561691 FLAD1Q8NFF5 587 aa11.94□□□□□ -0.5
TUBGCP4-202ENST00000561691 WDR66Q8TBY9 1149 aa11.94□□□□□ -0.5
TUBGCP4-202ENST00000561691 ZNF830Q96NB3 372 aaPredicted RBP11.94□□□□□ -0.5
TUBGCP4-202ENST00000561691 KRT23Q9C075 422 aa11.94□□□□□ -0.5
TUBGCP4-202ENST00000561691 AATFQ9NY61 560 aaKnown RBP eCLIP11.94□□□□□ -0.5
TUBGCP4-202ENST00000561691 GGA1Q9UJY5 639 aa11.94□□□□□ -0.5
TUBGCP4-202ENST00000561691 ATP6V0A2Q9Y487 856 aa11.94□□□□□ -0.5
TUBGCP4-202ENST00000561691 BAZ2AQ9UIF9 1905 aaKnown RBP11.94□□□□□ -0.5
TUBGCP4-202ENST00000561691 PPEF1O14829 653 aaPredicted RBP11.94□□□□□ -0.5
TUBGCP4-202ENST00000561691 GTF2F1P35269 517 aaKnown RBP eCLIP11.94□□□□□ -0.5
TUBGCP4-202ENST00000561691 PPP4CP60510 307 aa11.94□□□□□ -0.5
TUBGCP4-202ENST00000561691 TMEM67Q5HYA8 995 aa11.94□□□□□ -0.5
TUBGCP4-202ENST00000561691 ZNF804AQ7Z570 1209 aa11.94□□□□□ -0.5
TUBGCP4-202ENST00000561691 USP17L12C9JPN9 530 aa11.93□□□□□ -0.5
TUBGCP4-202ENST00000561691 USP17L21D6R901 530 aa11.93□□□□□ -0.5
TUBGCP4-202ENST00000561691 CYP2D6P10635 497 aa11.93□□□□□ -0.5
TUBGCP4-202ENST00000561691 RXRAP19793 462 aa11.93□□□□□ -0.5
TUBGCP4-202ENST00000561691 DIXDC1Q155Q3 683 aa11.93□□□□□ -0.5
TUBGCP4-202ENST00000561691 SBK1Q52WX2 424 aa11.93□□□□□ -0.5
TUBGCP4-202ENST00000561691 OTUD7BQ6GQQ9 843 aa11.93□□□□□ -0.5
TUBGCP4-202ENST00000561691 TMC4Q7Z404 712 aa11.93□□□□□ -0.5
TUBGCP4-202ENST00000561691 LEO1Q8WVC0 666 aaPredicted RBP11.93□□□□□ -0.5
TUBGCP4-202ENST00000561691 MYL10Q9BUA6 226 aa11.93□□□□□ -0.5
TUBGCP4-202ENST00000561691 GJB4Q9NTQ9 266 aa11.93□□□□□ -0.5
TUBGCP4-202ENST00000561691 LAMB1P07942 1786 aa11.93□□□□□ -0.5
TUBGCP4-202ENST00000561691 FAM205AQ6ZU69 1335 aa11.92□□□□□ -0.5
TUBGCP4-202ENST00000561691 IFIT3O14879 490 aaKnown RBP11.92□□□□□ -0.5
TUBGCP4-202ENST00000561691 NPR1P16066 1061 aa11.92□□□□□ -0.5
TUBGCP4-202ENST00000561691 KRT85P78386 507 aa11.92□□□□□ -0.5
TUBGCP4-202ENST00000561691 SPTY2D1Q68D10 685 aaPredicted RBP11.92□□□□□ -0.5
TUBGCP4-202ENST00000561691 FAM184AQ8NB25 1140 aa11.92□□□□□ -0.5
TUBGCP4-202ENST00000561691 RGS22Q8NE09 1264 aa11.92□□□□□ -0.5
TUBGCP4-202ENST00000561691 PGBD1Q96JS3 809 aa11.92□□□□□ -0.5
TUBGCP4-202ENST00000561691 RTFDC1Q9BY42 306 aaPredicted RBP11.92□□□□□ -0.5
TUBGCP4-202ENST00000561691 RNF41Q9H4P4 317 aaPredicted RBP11.92□□□□□ -0.5
TUBGCP4-202ENST00000561691 ZSCAN16Q9H4T2 348 aaPredicted RBP11.92□□□□□ -0.5
TUBGCP4-202ENST00000561691 ATP8A2Q9NTI2 1148 aa11.92□□□□□ -0.5
TUBGCP4-202ENST00000561691 TFIP11Q9UBB9 837 aaKnown RBP11.92□□□□□ -0.5
TUBGCP4-202ENST00000561691 CCDC88AQ3V6T2 1871 aa11.92□□□□□ -0.5
TUBGCP4-202ENST00000561691 DDX60LQ5H9U9 1706 aaKnown RBP11.92□□□□□ -0.5
TUBGCP4-202ENST00000561691 ECM29Q5VYK3 1845 aa11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 74.3 ms