RNA–Protein interactions for RNA: ENST00000559658.5

CHRNA3-206, Transcript of cholinergic receptor nicotinic alpha 3 subunit, humanhuman

TSL 2

Gene CHRNA3, Length 1,889 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3-206ENST00000559658 USP5P45974 858 aa20.56■□□□□ 0.88
CHRNA3-206ENST00000559658 ANTXR2P58335 489 aa20.56■□□□□ 0.88
CHRNA3-206ENST00000559658 ARHGAP27Q6ZUM4 889 aa20.56■□□□□ 0.88
CHRNA3-206ENST00000559658 MB21D2Q8IYB1 491 aaPredicted RBP20.56■□□□□ 0.88
CHRNA3-206ENST00000559658 NOL10Q9BSC4 688 aaKnown RBP20.56■□□□□ 0.88
CHRNA3-206ENST00000559658 DDX4Q9NQI0 724 aaKnown RBP20.56■□□□□ 0.88
CHRNA3-206ENST00000559658 SAP30BPQ9UHR5 308 aaKnown RBP20.56■□□□□ 0.88
CHRNA3-206ENST00000559658 DICER1Q9UPY3 1922 aaKnown RBP20.56■□□□□ 0.88
CHRNA3-206ENST00000559658 FLT1P17948 1338 aa20.56■□□□□ 0.88
CHRNA3-206ENST00000559658 DTNBO60941 627 aa20.56■□□□□ 0.88
CHRNA3-206ENST00000559658 CACNB3P54284 484 aa20.56■□□□□ 0.88
CHRNA3-206ENST00000559658 CDC42EP5Q6NZY7 148 aa20.56■□□□□ 0.88
CHRNA3-206ENST00000559658 HHIPL2Q6UWX4 724 aa20.56■□□□□ 0.88
CHRNA3-206ENST00000559658 JDP2Q8WYK2 163 aa20.56■□□□□ 0.88
CHRNA3-206ENST00000559658 ATP8A2Q9NTI2 1148 aa20.56■□□□□ 0.88
CHRNA3-206ENST00000559658 B4E1Z4 1266 aa20.55■□□□□ 0.88
CHRNA3-206ENST00000559658 SLF2Q8IX21 1173 aa20.55■□□□□ 0.88
CHRNA3-206ENST00000559658 TMX3Q96JJ7 454 aa20.55■□□□□ 0.88
CHRNA3-206ENST00000559658 MCM9Q9NXL9 1143 aa20.55■□□□□ 0.88
CHRNA3-206ENST00000559658 ZNF541Q9H0D2 1346 aa20.55■□□□□ 0.88
CHRNA3-206ENST00000559658 WDHD1O75717 1129 aaPredicted RBP20.54■□□□□ 0.88
CHRNA3-206ENST00000559658 EXOSC10Q01780 885 aaKnown RBP20.54■□□□□ 0.88
CHRNA3-206ENST00000559658 NFIAQ12857 509 aa20.54■□□□□ 0.88
CHRNA3-206ENST00000559658 PICALMQ13492 652 aa20.54■□□□□ 0.88
CHRNA3-206ENST00000559658 CYB5R4Q7L1T6 521 aa20.54■□□□□ 0.88
CHRNA3-206ENST00000559658 ZDHHC15Q96MV8 337 aa20.54■□□□□ 0.88
CHRNA3-206ENST00000559658 SLKQ9H2G2 1235 aaPredicted RBP20.54■□□□□ 0.88
CHRNA3-206ENST00000559658 DAXXQ9UER7 740 aaPredicted RBP20.54■□□□□ 0.88
CHRNA3-206ENST00000559658 RBM5P52756 815 aaKnown RBP eCLIP20.54■□□□□ 0.88
CHRNA3-206ENST00000559658 GIMAP6Q6P9H5 292 aa20.54■□□□□ 0.88
CHRNA3-206ENST00000559658 Q6ZUG5 572 aa20.54■□□□□ 0.88
CHRNA3-206ENST00000559658 USP40Q9NVE5 1235 aa20.54■□□□□ 0.88
CHRNA3-206ENST00000559658 TPCN1Q9ULQ1 816 aa20.54■□□□□ 0.88
CHRNA3-206ENST00000559658 PRDM1O75626 825 aa20.53■□□□□ 0.88
CHRNA3-206ENST00000559658 ST3GAL1Q11201 340 aa20.53■□□□□ 0.88
CHRNA3-206ENST00000559658 CFAP100Q494V2 611 aa20.53■□□□□ 0.88
CHRNA3-206ENST00000559658 AKNAD1Q5T1N1 836 aa20.53■□□□□ 0.88
CHRNA3-206ENST00000559658 DHX32Q7L7V1 743 aaKnown RBP20.53■□□□□ 0.88
CHRNA3-206ENST00000559658 PLCD1P51178 756 aa20.52■□□□□ 0.88
CHRNA3-206ENST00000559658 RRP12Q5JTH9 1297 aaKnown RBP20.52■□□□□ 0.88
CHRNA3-206ENST00000559658 CIAPIN1Q6FI81 312 aa20.52■□□□□ 0.88
CHRNA3-206ENST00000559658 NCOA7Q8NI08 942 aa20.52■□□□□ 0.88
CHRNA3-206ENST00000559658 STAG1Q8WVM7 1258 aa20.52■□□□□ 0.88
CHRNA3-206ENST00000559658 ANAPC4Q9UJX5 808 aa20.52■□□□□ 0.88
CHRNA3-206ENST00000559658 SERPINA10Q9UK55 444 aa20.52■□□□□ 0.88
CHRNA3-206ENST00000559658 SIPA1L1O43166 1804 aa20.52■□□□□ 0.88
CHRNA3-206ENST00000559658 DYNLL2Q96FJ2 89 aa20.52■□□□□ 0.87
CHRNA3-206ENST00000559658 PRMT6Q96LA8 375 aaPredicted RBP20.52■□□□□ 0.87
CHRNA3-206ENST00000559658 ARPP21Q9UBL0 812 aaPredicted RBP20.52■□□□□ 0.87
CHRNA3-206ENST00000559658 FZD9O00144 591 aa20.51■□□□□ 0.87
CHRNA3-206ENST00000559658 PLCG2P16885 1265 aa20.51■□□□□ 0.87
CHRNA3-206ENST00000559658 ZFPM1Q8IX07 1006 aa20.51■□□□□ 0.87
CHRNA3-206ENST00000559658 BRF1Q92994 677 aa20.51■□□□□ 0.87
CHRNA3-206ENST00000559658 MYO3BQ8WXR4 1341 aa20.51■□□□□ 0.87
CHRNA3-206ENST00000559658 PRC1O43663 620 aa20.5■□□□□ 0.87
CHRNA3-206ENST00000559658 KDM4AO75164 1064 aa20.5■□□□□ 0.87
CHRNA3-206ENST00000559658 EGFRP00533 1210 aa20.5■□□□□ 0.87
CHRNA3-206ENST00000559658 SLURP2P0DP57 97 aa20.5■□□□□ 0.87
CHRNA3-206ENST00000559658 ME3Q16798 604 aa20.5■□□□□ 0.87
CHRNA3-206ENST00000559658 SBK1Q52WX2 424 aa20.5■□□□□ 0.87
CHRNA3-206ENST00000559658 C12orf60Q5U649 245 aa20.5■□□□□ 0.87
CHRNA3-206ENST00000559658 MFSD6Q6ZSS7 791 aa20.5■□□□□ 0.87
CHRNA3-206ENST00000559658 RALYLQ86SE5 291 aaKnown RBP20.5■□□□□ 0.87
CHRNA3-206ENST00000559658 SLC44A5Q8NCS7 719 aa20.5■□□□□ 0.87
CHRNA3-206ENST00000559658 TDRD3Q9H7E2 651 aaKnown RBP20.5■□□□□ 0.87
CHRNA3-206ENST00000559658 SENP2Q9HC62 589 aa20.5■□□□□ 0.87
CHRNA3-206ENST00000559658 TOMM22Q9NS69 142 aa20.5■□□□□ 0.87
CHRNA3-206ENST00000559658 HDLBPQ00341 1268 aaKnown RBP20.5■□□□□ 0.87
CHRNA3-206ENST00000559658 HMGB1P09429 215 aaKnown RBP20.49■□□□□ 0.87
CHRNA3-206ENST00000559658 NECAB1Q8N987 351 aa20.49■□□□□ 0.87
CHRNA3-206ENST00000559658 ZKSCAN3Q9BRR0 538 aa20.49■□□□□ 0.87
CHRNA3-206ENST00000559658 MRIQ9BWK5 157 aa20.49■□□□□ 0.87
CHRNA3-206ENST00000559658 LIMCH1Q9UPQ0 1083 aa20.49■□□□□ 0.87
CHRNA3-206ENST00000559658 DDX52Q9Y2R4 599 aaKnown RBP eCLIP20.49■□□□□ 0.87
CHRNA3-206ENST00000559658 GJA3Q9Y6H8 435 aa20.49■□□□□ 0.87
CHRNA3-206ENST00000559658 APOBRQ0VD83 1088 aa20.48■□□□□ 0.87
CHRNA3-206ENST00000559658 ZSWIM5Q9P217 1185 aa20.48■□□□□ 0.87
CHRNA3-206ENST00000559658 FAM198AQ9UFP1 575 aa20.48■□□□□ 0.87
CHRNA3-206ENST00000559658 ROBO3Q96MS0 1386 aa20.48■□□□□ 0.87
CHRNA3-206ENST00000559658 SPDYE2BA6NHP3 402 aa20.47■□□□□ 0.87
CHRNA3-206ENST00000559658 SPDYE6P0CI01 402 aa20.47■□□□□ 0.87
CHRNA3-206ENST00000559658 LMNB1P20700 586 aa20.47■□□□□ 0.87
CHRNA3-206ENST00000559658 MCM5P33992 734 aa20.47■□□□□ 0.87
CHRNA3-206ENST00000559658 MCM2P49736 904 aa20.47■□□□□ 0.87
CHRNA3-206ENST00000559658 TRDNQ13061 729 aa20.47■□□□□ 0.87
CHRNA3-206ENST00000559658 CERS3Q8IU89 383 aa20.47■□□□□ 0.87
CHRNA3-206ENST00000559658 AGBL3Q8NEM8 1001 aa20.47■□□□□ 0.87
CHRNA3-206ENST00000559658 AGXT2Q9BYV1 514 aa20.47■□□□□ 0.87
CHRNA3-206ENST00000559658 ALDH8A1Q9H2A2 487 aaPredicted RBP20.47■□□□□ 0.87
CHRNA3-206ENST00000559658 CLRN2A0PK11 232 aa20.47■□□□□ 0.87
CHRNA3-206ENST00000559658 GMPSP49915 693 aaPredicted RBP20.47■□□□□ 0.87
CHRNA3-206ENST00000559658 TCP10Q12799 353 aa20.47■□□□□ 0.87
CHRNA3-206ENST00000559658 STK3Q13188 491 aa20.47■□□□□ 0.87
CHRNA3-206ENST00000559658 SOCS7O14512 581 aa20.46■□□□□ 0.87
CHRNA3-206ENST00000559658 POLR3DP05423 398 aaPredicted RBP20.46■□□□□ 0.87
CHRNA3-206ENST00000559658 FGRP09769 529 aa20.46■□□□□ 0.87
CHRNA3-206ENST00000559658 CUL4AQ13619 759 aa20.46■□□□□ 0.87
CHRNA3-206ENST00000559658 RAB11FIP4Q86YS3 637 aa20.46■□□□□ 0.87
CHRNA3-206ENST00000559658 OSBPL5Q9H0X9 879 aaPredicted RBP20.46■□□□□ 0.87
CHRNA3-206ENST00000559658 FGD1P98174 961 aa20.45■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms