RNA–Protein interactions for RNA: ENST00000553778.6

CFAP54-204, Transcript of cilia and flagella associated protein 54, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene CFAP54, Length 1,967 nt, Biotype non stop decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP54-204ENST00000553778 CCDC151A5D8V7 595 aa11.56□□□□□ -0.56
CFAP54-204ENST00000553778 PDCP20941 246 aa11.56□□□□□ -0.56
CFAP54-204ENST00000553778 MAP2K2P36507 400 aa11.56□□□□□ -0.56
CFAP54-204ENST00000553778 BRD3Q15059 726 aa11.56□□□□□ -0.56
CFAP54-204ENST00000553778 CRY2Q49AN0 593 aa11.56□□□□□ -0.56
CFAP54-204ENST00000553778 UBE3BQ7Z3V4 1068 aa11.56□□□□□ -0.56
CFAP54-204ENST00000553778 EGFL6Q8IUX8 553 aa11.56□□□□□ -0.56
CFAP54-204ENST00000553778 CNPY4Q8N129 248 aa11.56□□□□□ -0.56
CFAP54-204ENST00000553778 ANKRD20A12PQ8NF67 263 aa11.56□□□□□ -0.56
CFAP54-204ENST00000553778 RBM17Q96I25 401 aaKnown RBP11.56□□□□□ -0.56
CFAP54-204ENST00000553778 TOMM22Q9NS69 142 aa11.56□□□□□ -0.56
CFAP54-204ENST00000553778 TRMT1Q9NXH9 659 aaKnown RBP11.56□□□□□ -0.56
CFAP54-204ENST00000553778 CDHR2Q9BYE9 1310 aa11.55□□□□□ -0.56
CFAP54-204ENST00000553778 GRM8O00222 908 aa11.55□□□□□ -0.56
CFAP54-204ENST00000553778 SGSM2O43147 1006 aa11.55□□□□□ -0.56
CFAP54-204ENST00000553778 TUBB4BP68371 445 aa11.55□□□□□ -0.56
CFAP54-204ENST00000553778 NOL8Q76FK4 1167 aaKnown RBP11.55□□□□□ -0.56
CFAP54-204ENST00000553778 RABGGTAQ92696 567 aa11.55□□□□□ -0.56
CFAP54-204ENST00000553778 DNAJC25Q9H1X3 360 aa11.55□□□□□ -0.56
CFAP54-204ENST00000553778 A1CFQ9NQ94 594 aaKnown RBP11.55□□□□□ -0.56
CFAP54-204ENST00000553778 SUFUQ9UMX1 484 aa11.55□□□□□ -0.56
CFAP54-204ENST00000553778 RIC1Q4ADV7 1423 aa11.55□□□□□ -0.56
CFAP54-204ENST00000553778 CALRP27797 417 aaKnown RBP11.54□□□□□ -0.56
CFAP54-204ENST00000553778 GJB2P29033 226 aa11.54□□□□□ -0.56
CFAP54-204ENST00000553778 AK2P54819 239 aa11.54□□□□□ -0.56
CFAP54-204ENST00000553778 SF3B3Q15393 1217 aaKnown RBP11.54□□□□□ -0.56
CFAP54-204ENST00000553778 STX1AQ16623 288 aa11.54□□□□□ -0.56
CFAP54-204ENST00000553778 DDX46Q7L014 1031 aaKnown RBP11.54□□□□□ -0.56
CFAP54-204ENST00000553778 RUFY3Q7L099 469 aa11.54□□□□□ -0.56
CFAP54-204ENST00000553778 FCHSD1Q86WN1 690 aa11.54□□□□□ -0.56
CFAP54-204ENST00000553778 STAG1Q8WVM7 1258 aa11.54□□□□□ -0.56
CFAP54-204ENST00000553778 ZCCHC17Q9NP64 241 aaKnown RBP11.54□□□□□ -0.56
CFAP54-204ENST00000553778 RBM28Q9NW13 759 aaKnown RBP11.54□□□□□ -0.56
CFAP54-204ENST00000553778 GOLGA6L4A6NEF3 574 aa11.54□□□□□ -0.56
CFAP54-204ENST00000553778 GRIN3BO60391 1043 aa11.54□□□□□ -0.56
CFAP54-204ENST00000553778 CCDC152Q4G0S7 254 aa11.54□□□□□ -0.56
CFAP54-204ENST00000553778 C3orf67Q6ZVT6 689 aa11.54□□□□□ -0.56
CFAP54-204ENST00000553778 TADA2BQ86TJ2 420 aa11.54□□□□□ -0.56
CFAP54-204ENST00000553778 CKAP2LQ8IYA6 745 aa11.54□□□□□ -0.56
CFAP54-204ENST00000553778 LRRN4CLQ8ND94 238 aa11.54□□□□□ -0.56
CFAP54-204ENST00000553778 MPHOSPH8Q99549 860 aa11.54□□□□□ -0.56
CFAP54-204ENST00000553778 TM6SF1Q9BZW5 370 aa11.54□□□□□ -0.56
CFAP54-204ENST00000553778 N4BP2Q86UW6 1770 aaPredicted RBP11.53□□□□□ -0.56
CFAP54-204ENST00000553778 KIF3CO14782 793 aa11.53□□□□□ -0.56
CFAP54-204ENST00000553778 EIF3JO75822 258 aaKnown RBP11.53□□□□□ -0.56
CFAP54-204ENST00000553778 SMC2O95347 1197 aa11.53□□□□□ -0.56
CFAP54-204ENST00000553778 HOXA10P31260 410 aaPredicted RBP11.53□□□□□ -0.56
CFAP54-204ENST00000553778 TDO2P48775 406 aa11.53□□□□□ -0.56
CFAP54-204ENST00000553778 ARID5BQ14865 1188 aa11.53□□□□□ -0.56
CFAP54-204ENST00000553778 CAMK4Q16566 473 aa11.53□□□□□ -0.56
CFAP54-204ENST00000553778 VPS53Q5VIR6 699 aa11.53□□□□□ -0.56
CFAP54-204ENST00000553778 RSRC2Q7L4I2 434 aaKnown RBP11.53□□□□□ -0.56
CFAP54-204ENST00000553778 ERC1Q8IUD2 1116 aa11.53□□□□□ -0.56
CFAP54-204ENST00000553778 CRAMP1Q96RY5 1269 aa11.53□□□□□ -0.56
CFAP54-204ENST00000553778 MYH15Q9Y2K3 1946 aa11.53□□□□□ -0.56
CFAP54-204ENST00000553778 SRGAP3O43295 1099 aa11.52□□□□□ -0.56
CFAP54-204ENST00000553778 C21orf2O43822 256 aa11.52□□□□□ -0.56
CFAP54-204ENST00000553778 SEC31AO94979 1220 aaKnown RBP11.52□□□□□ -0.56
CFAP54-204ENST00000553778 NBPF7P0C2Y1 421 aaPredicted RBP11.52□□□□□ -0.56
CFAP54-204ENST00000553778 CASP7P55210 303 aa11.52□□□□□ -0.56
CFAP54-204ENST00000553778 EVCP57679 992 aa11.52□□□□□ -0.56
CFAP54-204ENST00000553778 ANKRD31Q8N7Z5 1873 aa11.52□□□□□ -0.56
CFAP54-204ENST00000553778 PLA2G12BQ9BX93 195 aa11.52□□□□□ -0.56
CFAP54-204ENST00000553778 USP44Q9H0E7 712 aa11.52□□□□□ -0.56
CFAP54-204ENST00000553778 TMX4Q9H1E5 349 aaPredicted RBP11.52□□□□□ -0.56
CFAP54-204ENST00000553778 SNX14Q9Y5W7 946 aa11.52□□□□□ -0.56
CFAP54-204ENST00000553778 UTYO14607 1347 aa11.52□□□□□ -0.57
CFAP54-204ENST00000553778 CCDC189A1A4V9 331 aa11.52□□□□□ -0.57
CFAP54-204ENST00000553778 POTEB2H3BUK9 544 aa11.52□□□□□ -0.57
CFAP54-204ENST00000553778 PPP1R12AO14974 1030 aaPredicted RBP11.52□□□□□ -0.57
CFAP54-204ENST00000553778 YBX3P16989 372 aaKnown RBP eCLIP11.52□□□□□ -0.57
CFAP54-204ENST00000553778 CTSWP56202 376 aa11.52□□□□□ -0.57
CFAP54-204ENST00000553778 SART3Q15020 963 aaKnown RBP11.52□□□□□ -0.57
CFAP54-204ENST00000553778 SAMD1Q6SPF0 538 aaPredicted RBP11.52□□□□□ -0.57
CFAP54-204ENST00000553778 TTLL11Q8NHH1 800 aa11.52□□□□□ -0.57
CFAP54-204ENST00000553778 GOLGA6L9A6NEM1 432 aa11.51□□□□□ -0.57
CFAP54-204ENST00000553778 PPFIA4O75335 1185 aa11.51□□□□□ -0.57
CFAP54-204ENST00000553778 BBOX1O75936 387 aa11.51□□□□□ -0.57
CFAP54-204ENST00000553778 GNAI3P08754 354 aa11.51□□□□□ -0.57
CFAP54-204ENST00000553778 USP5P45974 858 aa11.51□□□□□ -0.57
CFAP54-204ENST00000553778 APOBRQ0VD83 1088 aa11.51□□□□□ -0.57
CFAP54-204ENST00000553778 PRPF40BQ6NWY9 871 aaKnown RBP11.51□□□□□ -0.57
CFAP54-204ENST00000553778 TRIM65Q6PJ69 517 aa11.51□□□□□ -0.57
CFAP54-204ENST00000553778 SPATA32Q96LK8 384 aa11.51□□□□□ -0.57
CFAP54-204ENST00000553778 CCDC85AQ96PX6 553 aaPredicted RBP11.51□□□□□ -0.57
CFAP54-204ENST00000553778 NAT10Q9H0A0 1025 aaKnown RBP11.51□□□□□ -0.57
CFAP54-204ENST00000553778 ANO10Q9NW15 660 aa11.51□□□□□ -0.57
CFAP54-204ENST00000553778 ZNF219Q9P2Y4 722 aaPredicted RBP11.51□□□□□ -0.57
CFAP54-204ENST00000553778 BECN2A8MW95 431 aa11.5□□□□□ -0.57
CFAP54-204ENST00000553778 SFPQP23246 707 aaKnown RBP eCLIP11.5□□□□□ -0.57
CFAP54-204ENST00000553778 SOGA3Q5TF21 947 aa11.5□□□□□ -0.57
CFAP54-204ENST00000553778 LEO1Q8WVC0 666 aaPredicted RBP11.5□□□□□ -0.57
CFAP54-204ENST00000553778 KIAA1551Q9HCM1 1747 aa11.5□□□□□ -0.57
CFAP54-204ENST00000553778 H3BQF6 201 aa11.5□□□□□ -0.57
CFAP54-204ENST00000553778 CSF1RP07333 972 aa11.5□□□□□ -0.57
CFAP54-204ENST00000553778 TUBBP07437 444 aa11.5□□□□□ -0.57
CFAP54-204ENST00000553778 UBTFL1P0CB47 393 aaPredicted RBP11.5□□□□□ -0.57
CFAP54-204ENST00000553778 MAP3K9P80192 1104 aa11.5□□□□□ -0.57
CFAP54-204ENST00000553778 GRAPQ13588 217 aa11.5□□□□□ -0.57
CFAP54-204ENST00000553778 LONRF2Q1L5Z9 754 aa11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms