RNA–Protein interactions for RNA: ENST00000545209.1

SPPL3-209, Transcript of signal peptide peptidase like 3, humanhuman

TSL 1 (best)

Gene SPPL3, Length 797 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPPL3-209ENST00000545209 ANKRD18AQ8IVF6 992 aa8.39□□□□□ -1.07
SPPL3-209ENST00000545209 CCDC24Q8N4L8 307 aa8.39□□□□□ -1.07
SPPL3-209ENST00000545209 INTS4Q96HW7 963 aaKnown RBP8.39□□□□□ -1.07
SPPL3-209ENST00000545209 NDUFB9Q9Y6M9 179 aa8.39□□□□□ -1.07
SPPL3-209ENST00000545209 SBF2Q86WG5 1849 aa8.38□□□□□ -1.07
SPPL3-209ENST00000545209 C4BP0C0L5 1744 aa8.38□□□□□ -1.07
SPPL3-209ENST00000545209 DDX60Q8IY21 1712 aaKnown RBP8.38□□□□□ -1.07
SPPL3-209ENST00000545209 CFAP99D6REC4 459 aa8.38□□□□□ -1.07
SPPL3-209ENST00000545209 GOLGA6L22H0YM25 854 aa8.38□□□□□ -1.07
SPPL3-209ENST00000545209 FGFR2P21802 821 aa8.38□□□□□ -1.07
SPPL3-209ENST00000545209 ARID4AP29374 1257 aaPredicted RBP8.38□□□□□ -1.07
SPPL3-209ENST00000545209 MCM4P33991 863 aa8.38□□□□□ -1.07
SPPL3-209ENST00000545209 ZAP70P43403 619 aa8.38□□□□□ -1.07
SPPL3-209ENST00000545209 CUL4AQ13619 759 aa8.38□□□□□ -1.07
SPPL3-209ENST00000545209 ANKRD1Q15327 319 aa8.38□□□□□ -1.07
SPPL3-209ENST00000545209 TSGA10IPQ3SY00 556 aa8.38□□□□□ -1.07
SPPL3-209ENST00000545209 BLOC1S2Q6QNY1 142 aa8.38□□□□□ -1.07
SPPL3-209ENST00000545209 NOL8Q76FK4 1167 aaKnown RBP8.38□□□□□ -1.07
SPPL3-209ENST00000545209 ZSCAN31Q96LW9 406 aaPredicted RBP8.38□□□□□ -1.07
SPPL3-209ENST00000545209 NLRP3Q96P20 1036 aa8.38□□□□□ -1.07
SPPL3-209ENST00000545209 NUDT12Q9BQG2 462 aa8.38□□□□□ -1.07
SPPL3-209ENST00000545209 DSCC1Q9BVC3 393 aa8.38□□□□□ -1.07
SPPL3-209ENST00000545209 SEC31BQ9NQW1 1179 aa8.38□□□□□ -1.07
SPPL3-209ENST00000545209 SH2B1Q9NRF2 756 aaPredicted RBP8.38□□□□□ -1.07
SPPL3-209ENST00000545209 PDRG1Q9NUG6 133 aa8.38□□□□□ -1.07
SPPL3-209ENST00000545209 SRP68Q9UHB9 627 aaKnown RBP8.38□□□□□ -1.07
SPPL3-209ENST00000545209 LIMCH1Q9UPQ0 1083 aa8.38□□□□□ -1.07
SPPL3-209ENST00000545209 CARMIL3Q8ND23 1372 aa8.37□□□□□ -1.07
SPPL3-209ENST00000545209 RPAP1Q9BWH6 1393 aaPredicted RBP8.37□□□□□ -1.07
SPPL3-209ENST00000545209 RBM6P78332 1123 aaKnown RBP8.37□□□□□ -1.07
SPPL3-209ENST00000545209 WASHC4Q2M389 1173 aa8.37□□□□□ -1.07
SPPL3-209ENST00000545209 ZNF697Q5TEC3 545 aa8.37□□□□□ -1.07
SPPL3-209ENST00000545209 CCDC102BQ68D86 513 aa8.37□□□□□ -1.07
SPPL3-209ENST00000545209 CCDC129Q6ZRS4 1044 aa8.37□□□□□ -1.07
SPPL3-209ENST00000545209 RUFY3Q7L099 469 aa8.37□□□□□ -1.07
SPPL3-209ENST00000545209 HELBQ8NG08 1087 aaPredicted RBP8.37□□□□□ -1.07
SPPL3-209ENST00000545209 APPBP2Q92624 585 aa8.37□□□□□ -1.07
SPPL3-209ENST00000545209 TTC14Q96N46 770 aa8.37□□□□□ -1.07
SPPL3-209ENST00000545209 GNL3LQ9NVN8 582 aaKnown RBP8.37□□□□□ -1.07
SPPL3-209ENST00000545209 BSDC1Q9NW68 430 aaPredicted RBP8.37□□□□□ -1.07
SPPL3-209ENST00000545209 CTNNA3Q9UI47 895 aa8.37□□□□□ -1.07
SPPL3-209ENST00000545209 ZSCAN21Q9Y5A6 473 aaPredicted RBP8.37□□□□□ -1.07
SPPL3-209ENST00000545209 COL24A1Q17RW2 1714 aa8.37□□□□□ -1.07
SPPL3-209ENST00000545209 ARAP2Q8WZ64 1704 aa8.37□□□□□ -1.07
SPPL3-209ENST00000545209 TAF1LQ8IZX4 1826 aa8.36□□□□□ -1.07
SPPL3-209ENST00000545209 MAST3O60307 1309 aa8.36□□□□□ -1.07
SPPL3-209ENST00000545209 TRIM37O94972 964 aa8.36□□□□□ -1.07
SPPL3-209ENST00000545209 HMGB1P09429 215 aaKnown RBP8.36□□□□□ -1.07
SPPL3-209ENST00000545209 MCAMP43121 646 aa8.36□□□□□ -1.07
SPPL3-209ENST00000545209 PHKA1P46020 1223 aa8.36□□□□□ -1.07
SPPL3-209ENST00000545209 AK2P54819 239 aa8.36□□□□□ -1.07
SPPL3-209ENST00000545209 CHRNDQ07001 517 aa8.36□□□□□ -1.07
SPPL3-209ENST00000545209 SCARF1Q14162 830 aa8.36□□□□□ -1.07
SPPL3-209ENST00000545209 PTPRNQ16849 979 aa8.36□□□□□ -1.07
SPPL3-209ENST00000545209 LYPD8Q6UX82 237 aa8.36□□□□□ -1.07
SPPL3-209ENST00000545209 PROCA1Q8NCQ7 364 aaPredicted RBP8.36□□□□□ -1.07
SPPL3-209ENST00000545209 TNPO1Q92973 898 aaKnown RBP8.36□□□□□ -1.07
SPPL3-209ENST00000545209 SEC62Q99442 399 aaKnown RBP8.36□□□□□ -1.07
SPPL3-209ENST00000545209 GFRA3O60609 400 aa8.35□□□□□ -1.07
SPPL3-209ENST00000545209 IDH1O75874 414 aaKnown RBP8.35□□□□□ -1.07
SPPL3-209ENST00000545209 CCNYL3P0C7X3 344 aa8.35□□□□□ -1.07
SPPL3-209ENST00000545209 RPS6KB1P23443 525 aa8.35□□□□□ -1.07
SPPL3-209ENST00000545209 MAP3K12Q12852 859 aa8.35□□□□□ -1.07
SPPL3-209ENST00000545209 UBE4AQ14139 1066 aa8.35□□□□□ -1.07
SPPL3-209ENST00000545209 ADCK5Q3MIX3 580 aa8.35□□□□□ -1.07
SPPL3-209ENST00000545209 ZGPATQ8N5A5 531 aaKnown RBP8.35□□□□□ -1.07
SPPL3-209ENST00000545209 CNBD1Q8NA66 436 aa8.35□□□□□ -1.07
SPPL3-209ENST00000545209 SPATA5Q8NB90 893 aa8.35□□□□□ -1.07
SPPL3-209ENST00000545209 ANKRD2Q9GZV1 360 aa8.35□□□□□ -1.07
SPPL3-209ENST00000545209 ALDH8A1Q9H2A2 487 aaPredicted RBP8.35□□□□□ -1.07
SPPL3-209ENST00000545209 GOPCQ9HD26 462 aa8.35□□□□□ -1.07
SPPL3-209ENST00000545209 EVA1BQ9NVM1 165 aa8.35□□□□□ -1.07
SPPL3-209ENST00000545209 M0R2C6 588 aa8.34□□□□□ -1.07
SPPL3-209ENST00000545209 CYP2E1P05181 493 aaPredicted RBP8.34□□□□□ -1.07
SPPL3-209ENST00000545209 HSPD1P10809 573 aaKnown RBP8.34□□□□□ -1.07
SPPL3-209ENST00000545209 ADD2P35612 726 aa8.34□□□□□ -1.07
SPPL3-209ENST00000545209 RPS8P62241 208 aaKnown RBP8.34□□□□□ -1.07
SPPL3-209ENST00000545209 ST5P78524 1137 aa8.34□□□□□ -1.07
SPPL3-209ENST00000545209 FGD1P98174 961 aa8.34□□□□□ -1.07
SPPL3-209ENST00000545209 TRIM32Q13049 653 aa8.34□□□□□ -1.07
SPPL3-209ENST00000545209 RASGRF1Q13972 1273 aa8.34□□□□□ -1.07
SPPL3-209ENST00000545209 NFIXQ14938 502 aa8.34□□□□□ -1.07
SPPL3-209ENST00000545209 LAPTM4AQ15012 233 aa8.34□□□□□ -1.07
SPPL3-209ENST00000545209 UBE3CQ15386 1083 aa8.34□□□□□ -1.07
SPPL3-209ENST00000545209 IMMTQ16891 758 aaKnown RBP8.34□□□□□ -1.07
SPPL3-209ENST00000545209 CAVIN4Q5BKX8 364 aa8.34□□□□□ -1.07
SPPL3-209ENST00000545209 SLC9C2Q5TAH2 1124 aa8.34□□□□□ -1.07
SPPL3-209ENST00000545209 PI16Q6UXB8 463 aa8.34□□□□□ -1.07
SPPL3-209ENST00000545209 CLEC17AQ6ZS10 378 aa8.34□□□□□ -1.07
SPPL3-209ENST00000545209 SMIM5Q71RC9 77 aa8.34□□□□□ -1.07
SPPL3-209ENST00000545209 VPS37DQ86XT2 251 aa8.34□□□□□ -1.07
SPPL3-209ENST00000545209 OSBP2Q969R2 916 aa8.34□□□□□ -1.07
SPPL3-209ENST00000545209 NEK1Q96PY6 1258 aa8.34□□□□□ -1.07
SPPL3-209ENST00000545209 GNL3Q9BVP2 549 aaKnown RBP eCLIP8.34□□□□□ -1.07
SPPL3-209ENST00000545209 LRRC4BQ9NT99 713 aa8.34□□□□□ -1.07
SPPL3-209ENST00000545209 SMC3Q9UQE7 1217 aa8.34□□□□□ -1.07
SPPL3-209ENST00000545209 C4AP0C0L4 1744 aa8.34□□□□□ -1.07
SPPL3-209ENST00000545209 WDR33Q9C0J8 1336 aaKnown RBP8.33□□□□□ -1.08
SPPL3-209ENST00000545209 GPAA1O43292 621 aa8.33□□□□□ -1.08
SPPL3-209ENST00000545209 PDIA4P13667 645 aaKnown RBP8.33□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms