RNA–Protein interactions for RNA: ENST00000536871.6

SMG6-203, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 2 BASIC

Gene SMG6, Length 1,865 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-203ENST00000536871 TMC4Q7Z404 712 aa15.78■□□□□ 0.12
SMG6-203ENST00000536871 NSUN4Q96CB9 384 aaKnown RBP15.78■□□□□ 0.12
SMG6-203ENST00000536871 NOL7Q9UMY1 257 aaKnown RBP15.78■□□□□ 0.12
SMG6-203ENST00000536871 DUOX1Q9NRD9 1551 aa15.77■□□□□ 0.12
SMG6-203ENST00000536871 COL1A1P02452 1464 aaPredicted RBP15.77■□□□□ 0.12
SMG6-203ENST00000536871 PRKAB2O43741 272 aa15.77■□□□□ 0.11
SMG6-203ENST00000536871 KINO60870 393 aaKnown RBP15.77■□□□□ 0.11
SMG6-203ENST00000536871 CALM1P0DP23 149 aa15.77■□□□□ 0.11
SMG6-203ENST00000536871 CALM2P0DP24 149 aa15.77■□□□□ 0.11
SMG6-203ENST00000536871 CALM3P0DP25 149 aa15.77■□□□□ 0.11
SMG6-203ENST00000536871 ME1P48163 572 aa15.77■□□□□ 0.11
SMG6-203ENST00000536871 GSTO1P78417 241 aa15.77■□□□□ 0.11
SMG6-203ENST00000536871 KIF23Q02241 960 aaPredicted RBP15.77■□□□□ 0.11
SMG6-203ENST00000536871 FAM160A1Q05DH4 1040 aa15.77■□□□□ 0.11
SMG6-203ENST00000536871 NFIXQ14938 502 aa15.77■□□□□ 0.11
SMG6-203ENST00000536871 NTRK3Q16288 839 aa15.77■□□□□ 0.11
SMG6-203ENST00000536871 MICU3Q86XE3 530 aa15.77■□□□□ 0.11
SMG6-203ENST00000536871 IQCA1Q86XH1 822 aa15.77■□□□□ 0.11
SMG6-203ENST00000536871 TOMM22Q9NS69 142 aa15.77■□□□□ 0.11
SMG6-203ENST00000536871 MYO5AQ9Y4I1 1855 aaKnown RBP15.77■□□□□ 0.11
SMG6-203ENST00000536871 SBF2Q86WG5 1849 aa15.77■□□□□ 0.11
SMG6-203ENST00000536871 TPM3P06753 285 aa15.76■□□□□ 0.11
SMG6-203ENST00000536871 TYRO3Q06418 890 aa15.76■□□□□ 0.11
SMG6-203ENST00000536871 STK38Q15208 465 aa15.76■□□□□ 0.11
SMG6-203ENST00000536871 SAFBQ15424 915 aaKnown RBP eCLIP15.76■□□□□ 0.11
SMG6-203ENST00000536871 RTN1Q16799 776 aa15.76■□□□□ 0.11
SMG6-203ENST00000536871 ZNF804AQ7Z570 1209 aa15.76■□□□□ 0.11
SMG6-203ENST00000536871 CCAR1Q8IX12 1150 aaKnown RBP15.76■□□□□ 0.11
SMG6-203ENST00000536871 ARPP21Q9UBL0 812 aaPredicted RBP15.76■□□□□ 0.11
SMG6-203ENST00000536871 C4AP0C0L4 1744 aa15.76■□□□□ 0.11
SMG6-203ENST00000536871 GNL2Q13823 731 aaKnown RBP15.76■□□□□ 0.11
SMG6-203ENST00000536871 SBK1Q52WX2 424 aa15.76■□□□□ 0.11
SMG6-203ENST00000536871 ILDR1Q86SU0 546 aaPredicted RBP15.76■□□□□ 0.11
SMG6-203ENST00000536871 LINC00301Q8NCQ3 95 aa15.76■□□□□ 0.11
SMG6-203ENST00000536871 MRPS27Q92552 414 aaKnown RBP15.76■□□□□ 0.11
SMG6-203ENST00000536871 RPGRQ92834 1020 aaKnown RBP15.76■□□□□ 0.11
SMG6-203ENST00000536871 RBM28Q9NW13 759 aaKnown RBP15.76■□□□□ 0.11
SMG6-203ENST00000536871 IQSEC3Q9UPP2 1182 aaPredicted RBP15.76■□□□□ 0.11
SMG6-203ENST00000536871 MYH15Q9Y2K3 1946 aa15.75■□□□□ 0.11
SMG6-203ENST00000536871 NR1I2O75469 434 aa15.75■□□□□ 0.11
SMG6-203ENST00000536871 DEXIO95424 95 aa15.75■□□□□ 0.11
SMG6-203ENST00000536871 XBP1P17861 261 aa15.75■□□□□ 0.11
SMG6-203ENST00000536871 HSPA1LP34931 641 aa15.75■□□□□ 0.11
SMG6-203ENST00000536871 GUCY1B3Q02153 619 aa15.75■□□□□ 0.11
SMG6-203ENST00000536871 RBM17Q96I25 401 aaKnown RBP15.75■□□□□ 0.11
SMG6-203ENST00000536871 MAST2Q6P0Q8 1798 aa15.75■□□□□ 0.11
SMG6-203ENST00000536871 COL4A1P02462 1669 aa15.75■□□□□ 0.11
SMG6-203ENST00000536871 CACNA1SQ13698 1873 aa15.74■□□□□ 0.11
SMG6-203ENST00000536871 IRS2Q9Y4H2 1338 aa15.74■□□□□ 0.11
SMG6-203ENST00000536871 CASZ1Q86V15 1759 aa15.74■□□□□ 0.11
SMG6-203ENST00000536871 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP15.74■□□□□ 0.11
SMG6-203ENST00000536871 MINDY4BA8MYZ0 360 aa15.74■□□□□ 0.11
SMG6-203ENST00000536871 SPTLC2O15270 562 aa15.74■□□□□ 0.11
SMG6-203ENST00000536871 ORC4O43929 436 aa15.74■□□□□ 0.11
SMG6-203ENST00000536871 BBOX1O75936 387 aa15.74■□□□□ 0.11
SMG6-203ENST00000536871 LDHCP07864 332 aa15.74■□□□□ 0.11
SMG6-203ENST00000536871 ATP2B4P23634 1241 aa15.74■□□□□ 0.11
SMG6-203ENST00000536871 U2AF2P26368 475 aaKnown RBP eCLIP15.74■□□□□ 0.119e-7■■■□□ 15.9
SMG6-203ENST00000536871 CDC27P30260 824 aa15.74■□□□□ 0.11
SMG6-203ENST00000536871 MECOMQ03112 1051 aa15.74■□□□□ 0.11
SMG6-203ENST00000536871 CRY2Q49AN0 593 aa15.74■□□□□ 0.11
SMG6-203ENST00000536871 CCDC178Q5BJE1 867 aa15.74■□□□□ 0.11
SMG6-203ENST00000536871 RRP12Q5JTH9 1297 aaKnown RBP15.74■□□□□ 0.11
SMG6-203ENST00000536871 ANO1Q5XXA6 986 aa15.74■□□□□ 0.11
SMG6-203ENST00000536871 KRT40Q6A162 431 aa15.74■□□□□ 0.11
SMG6-203ENST00000536871 ADGRA1Q86SQ6 560 aa15.74■□□□□ 0.11
SMG6-203ENST00000536871 QTRT2Q9H974 415 aaKnown RBP15.74■□□□□ 0.11
SMG6-203ENST00000536871 ANKIB1Q9P2G1 1089 aa15.74■□□□□ 0.11
SMG6-203ENST00000536871 USP25Q9UHP3 1055 aa15.74■□□□□ 0.11
SMG6-203ENST00000536871 PPP6R2O75170 966 aa15.74■□□□□ 0.11
SMG6-203ENST00000536871 PTMAP06454 111 aaKnown RBP15.74■□□□□ 0.11
SMG6-203ENST00000536871 FOSBP53539 338 aa15.74■□□□□ 0.11
SMG6-203ENST00000536871 DZIP1Q86YF9 867 aaKnown RBP15.74■□□□□ 0.11
SMG6-203ENST00000536871 AMOTL1Q8IY63 956 aa15.74■□□□□ 0.11
SMG6-203ENST00000536871 ZNF654Q8IZM8 581 aa15.74■□□□□ 0.11
SMG6-203ENST00000536871 FAM217BQ9NTX9 383 aaPredicted RBP15.74■□□□□ 0.11
SMG6-203ENST00000536871 GOLGA6L6A8MZA4 724 aa15.73■□□□□ 0.11
SMG6-203ENST00000536871 DDAH1O94760 285 aa15.73■□□□□ 0.11
SMG6-203ENST00000536871 BAG3O95817 575 aa15.73■□□□□ 0.11
SMG6-203ENST00000536871 CEBPZQ03701 1054 aaKnown RBP15.73■□□□□ 0.11
SMG6-203ENST00000536871 PDE4BQ07343 736 aa15.73■□□□□ 0.11
SMG6-203ENST00000536871 TPRNQ4KMQ1 711 aa15.73■□□□□ 0.11
SMG6-203ENST00000536871 PRR5LQ6MZQ0 368 aa15.73■□□□□ 0.11
SMG6-203ENST00000536871 CATIPQ7Z7H3 387 aa15.73■□□□□ 0.11
SMG6-203ENST00000536871 FSIP1Q8NA03 581 aa15.73■□□□□ 0.11
SMG6-203ENST00000536871 FANCBQ8NB91 859 aa15.73■□□□□ 0.11
SMG6-203ENST00000536871 ENGASEQ8NFI3 743 aa15.73■□□□□ 0.11
SMG6-203ENST00000536871 TDRD7Q8NHU6 1098 aaKnown RBP15.73■□□□□ 0.11
SMG6-203ENST00000536871 SDR42E1Q8WUS8 393 aa15.73■□□□□ 0.11
SMG6-203ENST00000536871 ZSCAN10Q96SZ4 725 aaPredicted RBP15.73■□□□□ 0.11
SMG6-203ENST00000536871 NOL10Q9BSC4 688 aaKnown RBP15.73■□□□□ 0.11
SMG6-203ENST00000536871 RNF26Q9BY78 433 aaPredicted RBP15.73■□□□□ 0.11
SMG6-203ENST00000536871 ZKSCAN5Q9Y2L8 839 aa15.73■□□□□ 0.11
SMG6-203ENST00000536871 CHD4Q14839 1912 aa15.72■□□□□ 0.11
SMG6-203ENST00000536871 AKAP17AQ02040 695 aaKnown RBP15.72■□□□□ 0.11
SMG6-203ENST00000536871 SLC39A14Q15043 492 aa15.72■□□□□ 0.11
SMG6-203ENST00000536871 SEC23AQ15436 765 aa15.72■□□□□ 0.11
SMG6-203ENST00000536871 CAMK4Q16566 473 aa15.72■□□□□ 0.11
SMG6-203ENST00000536871 KRT27Q7Z3Y8 459 aa15.72■□□□□ 0.11
SMG6-203ENST00000536871 SLC26A6Q9BXS9 759 aa15.72■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms