RNA–Protein interactions for RNA: ENST00000527547.5

CDC27-204, Transcript of cell division cycle 27, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CDC27, Length 2,579 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC27-204ENST00000527547 PICALMQ13492 652 aa10.88□□□□□ -0.67
CDC27-204ENST00000527547 ARHGAP27Q6ZUM4 889 aa10.88□□□□□ -0.67
CDC27-204ENST00000527547 RALYLQ86SE5 291 aaKnown RBP10.88□□□□□ -0.67
CDC27-204ENST00000527547 SLF2Q8IX21 1173 aa10.88□□□□□ -0.67
CDC27-204ENST00000527547 NCOA7Q8NI08 942 aa10.88□□□□□ -0.67
CDC27-204ENST00000527547 BRF1Q92994 677 aa10.88□□□□□ -0.67
CDC27-204ENST00000527547 TEKT1Q969V4 418 aa10.88□□□□□ -0.67
CDC27-204ENST00000527547 ATP8A2Q9NTI2 1148 aa10.88□□□□□ -0.67
CDC27-204ENST00000527547 STK3Q13188 491 aa10.87□□□□□ -0.67
CDC27-204ENST00000527547 ME3Q16798 604 aa10.87□□□□□ -0.67
CDC27-204ENST00000527547 AKNAD1Q5T1N1 836 aa10.87□□□□□ -0.67
CDC27-204ENST00000527547 RSBN1LQ6PCB5 846 aaPredicted RBP10.87□□□□□ -0.67
CDC27-204ENST00000527547 TMED8Q6PL24 325 aaPredicted RBP10.87□□□□□ -0.67
CDC27-204ENST00000527547 NECAB1Q8N987 351 aa10.87□□□□□ -0.67
CDC27-204ENST00000527547 JDP2Q8WYK2 163 aa10.87□□□□□ -0.67
CDC27-204ENST00000527547 DDX4Q9NQI0 724 aaKnown RBP10.87□□□□□ -0.67
CDC27-204ENST00000527547 USP40Q9NVE5 1235 aa10.87□□□□□ -0.67
CDC27-204ENST00000527547 LIMCH1Q9UPQ0 1083 aa10.87□□□□□ -0.67
CDC27-204ENST00000527547 SHTN1A0MZ66 631 aa10.87□□□□□ -0.67
CDC27-204ENST00000527547 PRC1O43663 620 aa10.87□□□□□ -0.67
CDC27-204ENST00000527547 KDM4AO75164 1064 aa10.87□□□□□ -0.67
CDC27-204ENST00000527547 VIL1P09327 827 aaKnown RBP10.87□□□□□ -0.67
CDC27-204ENST00000527547 MCM2P49736 904 aa10.87□□□□□ -0.67
CDC27-204ENST00000527547 FKBP1AP62942 108 aaKnown RBP10.87□□□□□ -0.67
CDC27-204ENST00000527547 FGD1P98174 961 aa10.87□□□□□ -0.67
CDC27-204ENST00000527547 CDC42EP5Q6NZY7 148 aa10.87□□□□□ -0.67
CDC27-204ENST00000527547 MFSD6Q6ZSS7 791 aa10.87□□□□□ -0.67
CDC27-204ENST00000527547 DYNLL2Q96FJ2 89 aa10.87□□□□□ -0.67
CDC27-204ENST00000527547 ZKSCAN3Q9BRR0 538 aa10.87□□□□□ -0.67
CDC27-204ENST00000527547 FLT1P17948 1338 aa10.87□□□□□ -0.67
CDC27-204ENST00000527547 CDK5RAP2Q96SN8 1893 aa10.87□□□□□ -0.67
CDC27-204ENST00000527547 HMGB1P09429 215 aaKnown RBP10.86□□□□□ -0.67
CDC27-204ENST00000527547 PLCD1P51178 756 aa10.86□□□□□ -0.67
CDC27-204ENST00000527547 APOBRQ0VD83 1088 aa10.86□□□□□ -0.67
CDC27-204ENST00000527547 ST3GAL1Q11201 340 aa10.86□□□□□ -0.67
CDC27-204ENST00000527547 NFIAQ12857 509 aa10.86□□□□□ -0.67
CDC27-204ENST00000527547 TRDNQ13061 729 aa10.86□□□□□ -0.67
CDC27-204ENST00000527547 HHIPL2Q6UWX4 724 aa10.86□□□□□ -0.67
CDC27-204ENST00000527547 STAG1Q8WVM7 1258 aa10.86□□□□□ -0.67
CDC27-204ENST00000527547 SENP2Q9HC62 589 aa10.86□□□□□ -0.67
CDC27-204ENST00000527547 ZSWIM5Q9P217 1185 aa10.86□□□□□ -0.67
CDC27-204ENST00000527547 IGSF3O75054 1194 aa10.86□□□□□ -0.67
CDC27-204ENST00000527547 WDHD1O75717 1129 aaPredicted RBP10.86□□□□□ -0.67
CDC27-204ENST00000527547 YBX3P16989 372 aaKnown RBP eCLIP10.86□□□□□ -0.67
CDC27-204ENST00000527547 GIMAP6Q6P9H5 292 aa10.86□□□□□ -0.67
CDC27-204ENST00000527547 RAB11FIP4Q86YS3 637 aa10.86□□□□□ -0.67
CDC27-204ENST00000527547 CCDC83Q8IWF9 413 aa10.86□□□□□ -0.67
CDC27-204ENST00000527547 GMLQ99445 158 aa10.86□□□□□ -0.67
CDC27-204ENST00000527547 VPS33BQ9H267 617 aa10.86□□□□□ -0.67
CDC27-204ENST00000527547 ARFGEF1Q9Y6D6 1849 aa10.86□□□□□ -0.67
CDC27-204ENST00000527547 TIAM2Q8IVF5 1701 aa10.85□□□□□ -0.67
CDC27-204ENST00000527547 SLURP2P0DP57 97 aa10.85□□□□□ -0.67
CDC27-204ENST00000527547 MCM5P33992 734 aa10.85□□□□□ -0.67
CDC27-204ENST00000527547 CFAP100Q494V2 611 aa10.85□□□□□ -0.67
CDC27-204ENST00000527547 ZFPM1Q8IX07 1006 aa10.85□□□□□ -0.67
CDC27-204ENST00000527547 SLC44A5Q8NCS7 719 aa10.85□□□□□ -0.67
CDC27-204ENST00000527547 PRMT6Q96LA8 375 aaPredicted RBP10.85□□□□□ -0.67
CDC27-204ENST00000527547 ZDHHC15Q96MV8 337 aa10.85□□□□□ -0.67
CDC27-204ENST00000527547 TDRD3Q9H7E2 651 aaKnown RBP10.85□□□□□ -0.67
CDC27-204ENST00000527547 ANAPC4Q9UJX5 808 aa10.85□□□□□ -0.67
CDC27-204ENST00000527547 NAP1L2Q9ULW6 460 aaPredicted RBP10.85□□□□□ -0.67
CDC27-204ENST00000527547 PSME4Q14997 1843 aa10.85□□□□□ -0.67
CDC27-204ENST00000527547 PLCG2P16885 1265 aa10.85□□□□□ -0.67
CDC27-204ENST00000527547 C12orf60Q5U649 245 aa10.85□□□□□ -0.67
CDC27-204ENST00000527547 CIAPIN1Q6FI81 312 aa10.85□□□□□ -0.67
CDC27-204ENST00000527547 ARPP21Q9UBL0 812 aaPredicted RBP10.85□□□□□ -0.67
CDC27-204ENST00000527547 NAV1Q8NEY1 1877 aa10.85□□□□□ -0.67
CDC27-204ENST00000527547 LTBP3Q9NS15 1303 aa10.84□□□□□ -0.67
CDC27-204ENST00000527547 POLR3DP05423 398 aaPredicted RBP10.84□□□□□ -0.67
CDC27-204ENST00000527547 TCP10Q12799 353 aa10.84□□□□□ -0.67
CDC27-204ENST00000527547 CUL4AQ13619 759 aa10.84□□□□□ -0.67
CDC27-204ENST00000527547 ALDH8A1Q9H2A2 487 aaPredicted RBP10.84□□□□□ -0.67
CDC27-204ENST00000527547 SERPINA10Q9UK55 444 aa10.84□□□□□ -0.67
CDC27-204ENST00000527547 GJA3Q9Y6H8 435 aa10.84□□□□□ -0.67
CDC27-204ENST00000527547 RANBP6O60518 1105 aaKnown RBP10.84□□□□□ -0.67
CDC27-204ENST00000527547 PPFIA3O75145 1194 aa10.84□□□□□ -0.67
CDC27-204ENST00000527547 SBK1Q52WX2 424 aa10.84□□□□□ -0.67
CDC27-204ENST00000527547 FAM47AQ5JRC9 791 aa10.84□□□□□ -0.67
CDC27-204ENST00000527547 BRPF3Q9ULD4 1205 aa10.84□□□□□ -0.67
CDC27-204ENST00000527547 LAMB1P07942 1786 aa10.84□□□□□ -0.67
CDC27-204ENST00000527547 ZNF541Q9H0D2 1346 aa10.83□□□□□ -0.67
CDC27-204ENST00000527547 CLRN2A0PK11 232 aa10.83□□□□□ -0.68
CDC27-204ENST00000527547 DDIT3P35638 169 aa10.83□□□□□ -0.68
CDC27-204ENST00000527547 ANKRD1Q15327 319 aa10.83□□□□□ -0.68
CDC27-204ENST00000527547 AGXT2Q9BYV1 514 aa10.83□□□□□ -0.68
CDC27-204ENST00000527547 KRT23Q9C075 422 aa10.83□□□□□ -0.68
CDC27-204ENST00000527547 SCAF8Q9UPN6 1271 aaKnown RBP10.83□□□□□ -0.68
CDC27-204ENST00000527547 NMT2O60551 498 aa10.83□□□□□ -0.68
CDC27-204ENST00000527547 EGFRP00533 1210 aa10.83□□□□□ -0.68
CDC27-204ENST00000527547 CCT2P78371 535 aaKnown RBP10.83□□□□□ -0.68
CDC27-204ENST00000527547 HDLBPQ00341 1268 aaKnown RBP10.83□□□□□ -0.68
CDC27-204ENST00000527547 PKP1Q13835 747 aa10.83□□□□□ -0.68
CDC27-204ENST00000527547 RNF41Q9H4P4 317 aaPredicted RBP10.83□□□□□ -0.68
CDC27-204ENST00000527547 CNNM2Q9H8M5 875 aa10.83□□□□□ -0.68
CDC27-204ENST00000527547 NCOA5Q9HCD5 579 aaKnown RBP10.83□□□□□ -0.68
CDC27-204ENST00000527547 DDX52Q9Y2R4 599 aaKnown RBP eCLIP10.83□□□□□ -0.68
CDC27-204ENST00000527547 MYO3BQ8WXR4 1341 aa10.83□□□□□ -0.68
CDC27-204ENST00000527547 FZD9O00144 591 aa10.82□□□□□ -0.68
CDC27-204ENST00000527547 RXRAP19793 462 aa10.82□□□□□ -0.68
CDC27-204ENST00000527547 RBM26Q5T8P6 1007 aaKnown RBP10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms