RNA–Protein interactions for RNA: ENST00000521540.1

NEFM-205, Transcript of neurofilament medium, humanhuman

TSL 5

Gene NEFM, Length 1,885 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEFM-205ENST00000521540 RTCBQ9Y3I0 505 aaKnown RBP15.45■□□□□ 0.06
NEFM-205ENST00000521540 PNPLA7Q6ZV29 1317 aa15.45■□□□□ 0.06
NEFM-205ENST00000521540 NID2Q14112 1375 aa15.45■□□□□ 0.06
NEFM-205ENST00000521540 PTGS1P23219 599 aa15.44■□□□□ 0.06
NEFM-205ENST00000521540 CMA1P23946 247 aa15.44■□□□□ 0.06
NEFM-205ENST00000521540 GTF2F1P35269 517 aaKnown RBP eCLIP15.44■□□□□ 0.06
NEFM-205ENST00000521540 SMIM5Q71RC9 77 aa15.44■□□□□ 0.06
NEFM-205ENST00000521540 CCDC186Q7Z3E2 898 aa15.44■□□□□ 0.06
NEFM-205ENST00000521540 IGDCC4Q8TDY8 1250 aa15.44■□□□□ 0.06
NEFM-205ENST00000521540 TIGD1Q96MW7 591 aa15.44■□□□□ 0.06
NEFM-205ENST00000521540 CDC5LQ99459 802 aaKnown RBP15.44■□□□□ 0.06
NEFM-205ENST00000521540 SDF4Q9BRK5 362 aa15.44■□□□□ 0.06
NEFM-205ENST00000521540 CLIP2Q9UDT6 1046 aa15.44■□□□□ 0.06
NEFM-205ENST00000521540 CLIC4Q9Y696 253 aa15.44■□□□□ 0.06
NEFM-205ENST00000521540 PPP6R2O75170 966 aa15.44■□□□□ 0.06
NEFM-205ENST00000521540 CAMTA2O94983 1202 aa15.44■□□□□ 0.06
NEFM-205ENST00000521540 ADRA2BP18089 450 aa15.44■□□□□ 0.06
NEFM-205ENST00000521540 TRIM29Q14134 588 aa15.44■□□□□ 0.06
NEFM-205ENST00000521540 DHX8Q14562 1220 aaKnown RBP15.44■□□□□ 0.06
NEFM-205ENST00000521540 SLC39A14Q15043 492 aa15.44■□□□□ 0.06
NEFM-205ENST00000521540 MAGEB6Q8N7X4 407 aa15.44■□□□□ 0.06
NEFM-205ENST00000521540 PYCARDQ9ULZ3 195 aa15.44■□□□□ 0.06
NEFM-205ENST00000521540 ZNF652Q9Y2D9 606 aa15.44■□□□□ 0.06
NEFM-205ENST00000521540 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP15.43■□□□□ 0.06
NEFM-205ENST00000521540 B4E1Z4 1266 aa15.43■□□□□ 0.06
NEFM-205ENST00000521540 RGL2O15211 777 aa15.43■□□□□ 0.06
NEFM-205ENST00000521540 POLR3DP05423 398 aaPredicted RBP15.43■□□□□ 0.06
NEFM-205ENST00000521540 IARSP41252 1262 aaKnown RBP15.43■□□□□ 0.06
NEFM-205ENST00000521540 RCAN1P53805 252 aa15.43■□□□□ 0.06
NEFM-205ENST00000521540 RASGRF1Q13972 1273 aa15.43■□□□□ 0.06
NEFM-205ENST00000521540 TMEM67Q5HYA8 995 aa15.43■□□□□ 0.06
NEFM-205ENST00000521540 OTUD7BQ6GQQ9 843 aa15.43■□□□□ 0.06
NEFM-205ENST00000521540 NFXL1Q6ZNB6 911 aa15.43■□□□□ 0.06
NEFM-205ENST00000521540 C11orf57Q6ZUT1 292 aaPredicted RBP15.43■□□□□ 0.06
NEFM-205ENST00000521540 TMTC2Q8N394 836 aa15.43■□□□□ 0.06
NEFM-205ENST00000521540 LY9Q9HBG7 655 aa15.43■□□□□ 0.06
NEFM-205ENST00000521540 KIAA1468Q9P260 1216 aa15.43■□□□□ 0.06
NEFM-205ENST00000521540 SCN7AQ01118 1682 aa15.42■□□□□ 0.06
NEFM-205ENST00000521540 GOLGA8AA7E2F4 631 aa15.42■□□□□ 0.06
NEFM-205ENST00000521540 MBD4O95243 580 aa15.42■□□□□ 0.06
NEFM-205ENST00000521540 SART3Q15020 963 aaKnown RBP15.42■□□□□ 0.06
NEFM-205ENST00000521540 AKNAD1Q5T1N1 836 aa15.42■□□□□ 0.06
NEFM-205ENST00000521540 HELBQ8NG08 1087 aaPredicted RBP15.42■□□□□ 0.06
NEFM-205ENST00000521540 RNF41Q9H4P4 317 aaPredicted RBP15.42■□□□□ 0.06
NEFM-205ENST00000521540 ECM29Q5VYK3 1845 aa15.42■□□□□ 0.06
NEFM-205ENST00000521540 NEDD4P46934 1319 aa15.42■□□□□ 0.06
NEFM-205ENST00000521540 A0A1B0GVL5 298 aa15.42■□□□□ 0.06
NEFM-205ENST00000521540 CCDC69A6NI79 296 aa15.42■□□□□ 0.06
NEFM-205ENST00000521540 NTSR2O95665 410 aa15.42■□□□□ 0.06
NEFM-205ENST00000521540 NDUFA8P51970 172 aa15.42■□□□□ 0.06
NEFM-205ENST00000521540 TPM4P67936 248 aa15.42■□□□□ 0.06
NEFM-205ENST00000521540 GNL2Q13823 731 aaKnown RBP15.42■□□□□ 0.06
NEFM-205ENST00000521540 KRT40Q6A162 431 aa15.42■□□□□ 0.06
NEFM-205ENST00000521540 MFSD6Q6ZSS7 791 aa15.42■□□□□ 0.06
NEFM-205ENST00000521540 DHX40Q8IX18 779 aaKnown RBP15.42■□□□□ 0.06
NEFM-205ENST00000521540 FLAD1Q8NFF5 587 aa15.42■□□□□ 0.06
NEFM-205ENST00000521540 STAG1Q8WVM7 1258 aa15.42■□□□□ 0.06
NEFM-205ENST00000521540 SLC12A7Q9Y666 1083 aa15.42■□□□□ 0.06
NEFM-205ENST00000521540 CASZ1Q86V15 1759 aa15.41■□□□□ 0.06
NEFM-205ENST00000521540 FAM237AA0A1B0GTK4 181 aa15.41■□□□□ 0.06
NEFM-205ENST00000521540 KIF28PB7ZC32 967 aa15.41■□□□□ 0.06
NEFM-205ENST00000521540 IFIT3O14879 490 aaKnown RBP15.41■□□□□ 0.06
NEFM-205ENST00000521540 PPFIA3O75145 1194 aa15.41■□□□□ 0.06
NEFM-205ENST00000521540 U2AF2P26368 475 aaKnown RBP eCLIP15.41■□□□□ 0.06
NEFM-205ENST00000521540 SSRP1Q08945 709 aaKnown RBP15.41■□□□□ 0.06
NEFM-205ENST00000521540 NTRK3Q16288 839 aa15.41■□□□□ 0.06
NEFM-205ENST00000521540 GLIPR1L2Q4G1C9 344 aa15.41■□□□□ 0.06
NEFM-205ENST00000521540 PDGFDQ9GZP0 370 aaPredicted RBP15.41■□□□□ 0.06
NEFM-205ENST00000521540 EPB41L4AQ9HCS5 686 aaPredicted RBP15.41■□□□□ 0.06
NEFM-205ENST00000521540 CCDC196A0A1B0GTZ2 297 aa15.4■□□□□ 0.06
NEFM-205ENST00000521540 SMTNL1A8MU46 457 aa15.4■□□□□ 0.06
NEFM-205ENST00000521540 GSG1L2A8MUP6 293 aa15.4■□□□□ 0.06
NEFM-205ENST00000521540 FMNL1O95466 1100 aaPredicted RBP15.4■□□□□ 0.06
NEFM-205ENST00000521540 SLC3A2P08195 630 aaKnown RBP15.4■□□□□ 0.06
NEFM-205ENST00000521540 IFNAR1P17181 557 aa15.4■□□□□ 0.06
NEFM-205ENST00000521540 NLRP12P59046 1061 aa15.4■□□□□ 0.06
NEFM-205ENST00000521540 AXDND1Q5T1B0 1012 aaPredicted RBP15.4■□□□□ 0.06
NEFM-205ENST00000521540 TRAPPC3LQ5T215 181 aa15.4■□□□□ 0.06
NEFM-205ENST00000521540 CLEC4GQ6UXB4 293 aa15.4■□□□□ 0.06
NEFM-205ENST00000521540 VPS37DQ86XT2 251 aa15.4■□□□□ 0.06
NEFM-205ENST00000521540 ARHGEF1Q92888 912 aaKnown RBP15.4■□□□□ 0.06
NEFM-205ENST00000521540 GNL3LQ9NVN8 582 aaKnown RBP15.4■□□□□ 0.06
NEFM-205ENST00000521540 ERICH2A1L162 156 aa15.4■□□□□ 0.06
NEFM-205ENST00000521540 ZNF202O95125 648 aa15.4■□□□□ 0.06
NEFM-205ENST00000521540 CDC27P30260 824 aa15.4■□□□□ 0.06
NEFM-205ENST00000521540 R3HDM1Q15032 1099 aaKnown RBP15.4■□□□□ 0.06
NEFM-205ENST00000521540 PPP2R5BQ15173 497 aa15.4■□□□□ 0.06
NEFM-205ENST00000521540 MICU3Q86XE3 530 aa15.4■□□□□ 0.06
NEFM-205ENST00000521540 COL23A1Q86Y22 540 aaPredicted RBP15.4■□□□□ 0.06
NEFM-205ENST00000521540 RAB11FIP4Q86YS3 637 aa15.4■□□□□ 0.06
NEFM-205ENST00000521540 ARMT1Q9H993 441 aa15.4■□□□□ 0.06
NEFM-205ENST00000521540 SEC31BQ9NQW1 1179 aa15.4■□□□□ 0.06
NEFM-205ENST00000521540 ZSWIM5Q9P217 1185 aa15.4■□□□□ 0.06
NEFM-205ENST00000521540 NIP7Q9Y221 180 aaKnown RBP eCLIP15.4■□□□□ 0.06
NEFM-205ENST00000521540 PSDA5PKW4 1024 aaPredicted RBP15.39■□□□□ 0.05
NEFM-205ENST00000521540 FAM177BA6PVY3 158 aa15.39■□□□□ 0.05
NEFM-205ENST00000521540 TDO2P48775 406 aa15.39■□□□□ 0.05
NEFM-205ENST00000521540 GSDMDP57764 484 aa15.39■□□□□ 0.05
NEFM-205ENST00000521540 SAFBQ15424 915 aaKnown RBP eCLIP15.39■□□□□ 0.05
NEFM-205ENST00000521540 C17orf53Q8N3J3 647 aaPredicted RBP15.39■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms