RNA–Protein interactions for RNA: ENST00000512189.1

LETM1-206, Transcript of leucine zipper and EF-hand containing transmembrane protein 1, humanhuman

TSL 3

Gene LETM1, Length 320 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETM1-206ENST00000512189 TTC14Q96N46 770 aa18.22■□□□□ 0.51
LETM1-206ENST00000512189 NEK1Q96PY6 1258 aa18.22■□□□□ 0.51
LETM1-206ENST00000512189 USP40Q9NVE5 1235 aa18.22■□□□□ 0.51
LETM1-206ENST00000512189 COL2A1P02458 1487 aaPredicted RBP18.21■□□□□ 0.51
LETM1-206ENST00000512189 USP17L12C9JPN9 530 aa18.21■□□□□ 0.51
LETM1-206ENST00000512189 USP17L21D6R901 530 aa18.21■□□□□ 0.51
LETM1-206ENST00000512189 NPM3O75607 178 aaKnown RBP18.21■□□□□ 0.51
LETM1-206ENST00000512189 CD2BP2O95400 341 aaKnown RBP18.21■□□□□ 0.51
LETM1-206ENST00000512189 RBM5P52756 815 aaKnown RBP eCLIP18.21■□□□□ 0.51
LETM1-206ENST00000512189 COL9A3Q14050 684 aaPredicted RBP18.21■□□□□ 0.51
LETM1-206ENST00000512189 C9orf131Q5VYM1 1079 aa18.21■□□□□ 0.51
LETM1-206ENST00000512189 BLOC1S2Q6QNY1 142 aa18.21■□□□□ 0.51
LETM1-206ENST00000512189 GPC2Q8N158 579 aa18.21■□□□□ 0.51
LETM1-206ENST00000512189 IDI2Q9BXS1 227 aa18.21■□□□□ 0.51
LETM1-206ENST00000512189 DDX4Q9NQI0 724 aaKnown RBP18.21■□□□□ 0.51
LETM1-206ENST00000512189 MCM9Q9NXL9 1143 aa18.21■□□□□ 0.51
LETM1-206ENST00000512189 ZC3H4Q9UPT8 1303 aaKnown RBP18.21■□□□□ 0.51
LETM1-206ENST00000512189 ST18O60284 1047 aa18.2■□□□□ 0.5
LETM1-206ENST00000512189 HMGB1P09429 215 aaKnown RBP18.2■□□□□ 0.5
LETM1-206ENST00000512189 RPS6KB1P23443 525 aa18.2■□□□□ 0.5
LETM1-206ENST00000512189 NEK4P51957 841 aa18.2■□□□□ 0.5
LETM1-206ENST00000512189 CTDSPL2Q05D32 466 aa18.2■□□□□ 0.5
LETM1-206ENST00000512189 DLGAP5Q15398 846 aa18.2■□□□□ 0.5
LETM1-206ENST00000512189 RUFY3Q7L099 469 aa18.2■□□□□ 0.5
LETM1-206ENST00000512189 MB21D2Q8IYB1 491 aaPredicted RBP18.2■□□□□ 0.5
LETM1-206ENST00000512189 PRMT6Q96LA8 375 aaPredicted RBP18.2■□□□□ 0.5
LETM1-206ENST00000512189 CYP46A1Q9Y6A2 500 aa18.2■□□□□ 0.5
LETM1-206ENST00000512189 TACC3Q9Y6A5 838 aa18.2■□□□□ 0.5
LETM1-206ENST00000512189 GJA3Q9Y6H8 435 aa18.2■□□□□ 0.5
LETM1-206ENST00000512189 NEDD4P46934 1319 aa18.2■□□□□ 0.5
LETM1-206ENST00000512189 CYP2D7A0A087X1C5 515 aa18.19■□□□□ 0.5
LETM1-206ENST00000512189 SHTN1A0MZ66 631 aa18.19■□□□□ 0.5
LETM1-206ENST00000512189 CYP2D6P10635 497 aa18.19■□□□□ 0.5
LETM1-206ENST00000512189 CPA1P15085 419 aa18.19■□□□□ 0.5
LETM1-206ENST00000512189 AKNAD1Q5T1N1 836 aa18.19■□□□□ 0.5
LETM1-206ENST00000512189 C12orf60Q5U649 245 aa18.19■□□□□ 0.5
LETM1-206ENST00000512189 MICALL2Q8IY33 904 aa18.19■□□□□ 0.5
LETM1-206ENST00000512189 TBC1D2Q9BYX2 928 aa18.19■□□□□ 0.5
LETM1-206ENST00000512189 OSBPL5Q9H0X9 879 aaPredicted RBP18.19■□□□□ 0.5
LETM1-206ENST00000512189 RNF41Q9H4P4 317 aaPredicted RBP18.19■□□□□ 0.5
LETM1-206ENST00000512189 MYOZ2Q9NPC6 264 aa18.19■□□□□ 0.5
LETM1-206ENST00000512189 BAZ2AQ9UIF9 1905 aaKnown RBP18.19■□□□□ 0.5
LETM1-206ENST00000512189 MINDY4BA8MYZ0 360 aa18.18■□□□□ 0.5
LETM1-206ENST00000512189 SMIM22K7EJ46 135 aa18.18■□□□□ 0.5
LETM1-206ENST00000512189 FGRP09769 529 aa18.18■□□□□ 0.5
LETM1-206ENST00000512189 PCP11498 1178 aaKnown RBP18.18■□□□□ 0.5
LETM1-206ENST00000512189 EVX2Q03828 476 aa18.18■□□□□ 0.5
LETM1-206ENST00000512189 NFIAQ12857 509 aa18.18■□□□□ 0.5
LETM1-206ENST00000512189 SPDYE2Q495Y8 402 aa18.18■□□□□ 0.5
LETM1-206ENST00000512189 AMOTL1Q8IY63 956 aa18.18■□□□□ 0.5
LETM1-206ENST00000512189 NCOA7Q8NI08 942 aa18.18■□□□□ 0.5
LETM1-206ENST00000512189 TDRD3Q9H7E2 651 aaKnown RBP18.18■□□□□ 0.5
LETM1-206ENST00000512189 CNNM2Q9H8M5 875 aa18.18■□□□□ 0.5
LETM1-206ENST00000512189 DDX52Q9Y2R4 599 aaKnown RBP eCLIP18.18■□□□□ 0.5
LETM1-206ENST00000512189 WDR19Q8NEZ3 1342 aa18.18■□□□□ 0.5
LETM1-206ENST00000512189 PICALMQ13492 652 aa18.17■□□□□ 0.5
LETM1-206ENST00000512189 BECN1Q14457 450 aa18.17■□□□□ 0.5
LETM1-206ENST00000512189 RALYLQ86SE5 291 aaKnown RBP18.17■□□□□ 0.5
LETM1-206ENST00000512189 HSCBQ8IWL3 235 aa18.17■□□□□ 0.5
LETM1-206ENST00000512189 IPO9Q96P70 1041 aaKnown RBP18.17■□□□□ 0.5
LETM1-206ENST00000512189 ALDH8A1Q9H2A2 487 aaPredicted RBP18.17■□□□□ 0.5
LETM1-206ENST00000512189 PDRG1Q9NUG6 133 aa18.17■□□□□ 0.5
LETM1-206ENST00000512189 FAM198AQ9UFP1 575 aa18.17■□□□□ 0.5
LETM1-206ENST00000512189 SAP30BPQ9UHR5 308 aaKnown RBP18.17■□□□□ 0.5
LETM1-206ENST00000512189 ATRNL1Q5VV63 1379 aa18.17■□□□□ 0.5
LETM1-206ENST00000512189 ENTPD3O75355 529 aa18.16■□□□□ 0.5
LETM1-206ENST00000512189 MCM2P49736 904 aa18.16■□□□□ 0.5
LETM1-206ENST00000512189 CACNB3P54284 484 aa18.16■□□□□ 0.5
LETM1-206ENST00000512189 EXOSC10Q01780 885 aaKnown RBP18.16■□□□□ 0.5
LETM1-206ENST00000512189 TRDNQ13061 729 aa18.16■□□□□ 0.5
LETM1-206ENST00000512189 FKBP1CQ5VVH2 108 aa18.16■□□□□ 0.5
LETM1-206ENST00000512189 MFSD6Q6ZSS7 791 aa18.16■□□□□ 0.5
LETM1-206ENST00000512189 DHX32Q7L7V1 743 aaKnown RBP18.16■□□□□ 0.5
LETM1-206ENST00000512189 GPRC5DQ9NZD1 345 aa18.16■□□□□ 0.5
LETM1-206ENST00000512189 TMOD2Q9NZR1 351 aa18.16■□□□□ 0.5
LETM1-206ENST00000512189 ZNF70Q9UC06 446 aaPredicted RBP18.16■□□□□ 0.5
LETM1-206ENST00000512189 CNOT7Q9UIV1 285 aaKnown RBP18.16■□□□□ 0.5
LETM1-206ENST00000512189 WNT10BO00744 389 aa18.15■□□□□ 0.5
LETM1-206ENST00000512189 ORC4O43929 436 aa18.15■□□□□ 0.5
LETM1-206ENST00000512189 POLR3DP05423 398 aaPredicted RBP18.15■□□□□ 0.5
LETM1-206ENST00000512189 SLC3A2P08195 630 aaKnown RBP18.15■□□□□ 0.5
LETM1-206ENST00000512189 NT5C2P49902 561 aa18.15■□□□□ 0.5
LETM1-206ENST00000512189 AK2P54819 239 aa18.15■□□□□ 0.5
LETM1-206ENST00000512189 ANTXR2P58335 489 aa18.15■□□□□ 0.5
LETM1-206ENST00000512189 NKX2-3Q8TAU0 364 aa18.15■□□□□ 0.5
LETM1-206ENST00000512189 AGXT2Q9BYV1 514 aa18.15■□□□□ 0.5
LETM1-206ENST00000512189 KRT23Q9C075 422 aa18.15■□□□□ 0.5
LETM1-206ENST00000512189 B4E1Z4 1266 aa18.14■□□□□ 0.49
LETM1-206ENST00000512189 K7ELQ4 463 aaPredicted RBP18.14■□□□□ 0.49
LETM1-206ENST00000512189 EGFRP00533 1210 aa18.14■□□□□ 0.49
LETM1-206ENST00000512189 PLCD1P51178 756 aa18.14■□□□□ 0.49
LETM1-206ENST00000512189 KIF4BQ2VIQ3 1234 aa18.14■□□□□ 0.49
LETM1-206ENST00000512189 FBXL16Q8N461 479 aa18.14■□□□□ 0.49
LETM1-206ENST00000512189 TCEANC2Q96MN5 208 aa18.14■□□□□ 0.49
LETM1-206ENST00000512189 SIPA1L1O43166 1804 aa18.14■□□□□ 0.49
LETM1-206ENST00000512189 MYH1P12882 1939 aa18.13■□□□□ 0.49
LETM1-206ENST00000512189 CLRN2A0PK11 232 aa18.13■□□□□ 0.49
LETM1-206ENST00000512189 PRC1O43663 620 aa18.13■□□□□ 0.49
LETM1-206ENST00000512189 MYO1BO43795 1136 aa18.13■□□□□ 0.49
LETM1-206ENST00000512189 DDNO94850 711 aaPredicted RBP18.13■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms