RNA–Protein interactions for RNA: ENST00000509109.5

CCSER1-208, Transcript of coiled-coil serine rich protein 1, humanhuman

TSL 1 (best)

Gene CCSER1, Length 1,070 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCSER1-208ENST00000509109 GPAMQ9HCL2 828 aa9.69□□□□□ -0.86
CCSER1-208ENST00000509109 RRP7AQ9Y3A4 280 aaKnown RBP9.69□□□□□ -0.86
CCSER1-208ENST00000509109 RNF123Q5XPI4 1314 aa9.68□□□□□ -0.86
CCSER1-208ENST00000509109 KLRG2A4D1S0 409 aaPredicted RBP9.68□□□□□ -0.86
CCSER1-208ENST00000509109 IQCA1LA6NCM1 817 aa9.68□□□□□ -0.86
CCSER1-208ENST00000509109 FAM177BA6PVY3 158 aa9.68□□□□□ -0.86
CCSER1-208ENST00000509109 TMPOP42166 694 aaKnown RBP9.68□□□□□ -0.86
CCSER1-208ENST00000509109 SCNN1DP51172 638 aa9.68□□□□□ -0.86
CCSER1-208ENST00000509109 GDF10P55107 478 aa9.68□□□□□ -0.86
CCSER1-208ENST00000509109 TLR1Q15399 786 aa9.68□□□□□ -0.86
CCSER1-208ENST00000509109 RTKN2Q8IZC4 609 aa9.68□□□□□ -0.86
CCSER1-208ENST00000509109 NGEFQ8N5V2 710 aa9.68□□□□□ -0.86
CCSER1-208ENST00000509109 RPGRQ92834 1020 aaKnown RBP9.68□□□□□ -0.86
CCSER1-208ENST00000509109 ABCC12Q96J65 1359 aa9.67□□□□□ -0.86
CCSER1-208ENST00000509109 PRELPP51888 382 aa9.67□□□□□ -0.86
CCSER1-208ENST00000509109 FKBP4Q02790 459 aaKnown RBP eCLIP9.67□□□□□ -0.86
CCSER1-208ENST00000509109 HLFQ16534 295 aa9.67□□□□□ -0.86
CCSER1-208ENST00000509109 PARP10Q53GL7 1025 aa9.67□□□□□ -0.86
CCSER1-208ENST00000509109 HSP90AB3PQ58FF7 597 aa9.67□□□□□ -0.86
CCSER1-208ENST00000509109 GNASQ5JWF2 1037 aa9.67□□□□□ -0.86
CCSER1-208ENST00000509109 PPP1R42Q7Z4L9 355 aa9.67□□□□□ -0.86
CCSER1-208ENST00000509109 DEPDC4Q8N2C3 294 aa9.67□□□□□ -0.86
CCSER1-208ENST00000509109 ADAMTS19Q8TE59 1207 aa9.67□□□□□ -0.86
CCSER1-208ENST00000509109 GTPBP3Q969Y2 492 aaKnown RBP9.67□□□□□ -0.86
CCSER1-208ENST00000509109 RUNDC1Q96C34 613 aa9.67□□□□□ -0.86
CCSER1-208ENST00000509109 GAS6Q14393 721 aa9.66□□□□□ -0.86
CCSER1-208ENST00000509109 CRY2Q49AN0 593 aa9.66□□□□□ -0.86
CCSER1-208ENST00000509109 C4orf17Q53FE4 359 aa9.66□□□□□ -0.86
CCSER1-208ENST00000509109 TMX4Q9H1E5 349 aaPredicted RBP9.66□□□□□ -0.86
CCSER1-208ENST00000509109 SERTAD1Q9UHV2 236 aa9.66□□□□□ -0.86
CCSER1-208ENST00000509109 UBN2Q6ZU65 1347 aa9.65□□□□□ -0.86
CCSER1-208ENST00000509109 F11P03951 625 aa9.65□□□□□ -0.86
CCSER1-208ENST00000509109 INHAP05111 366 aa9.65□□□□□ -0.86
CCSER1-208ENST00000509109 HOXB7P09629 217 aa9.65□□□□□ -0.86
CCSER1-208ENST00000509109 EIF2S2P20042 333 aaKnown RBP9.65□□□□□ -0.86
CCSER1-208ENST00000509109 GPTP24298 496 aa9.65□□□□□ -0.86
CCSER1-208ENST00000509109 CALD1Q05682 793 aaKnown RBP9.65□□□□□ -0.86
CCSER1-208ENST00000509109 NCOA4Q13772 614 aa9.65□□□□□ -0.86
CCSER1-208ENST00000509109 EML3Q32P44 896 aa9.65□□□□□ -0.86
CCSER1-208ENST00000509109 WDR44Q5JSH3 913 aa9.65□□□□□ -0.86
CCSER1-208ENST00000509109 TTLL7Q6ZT98 887 aa9.65□□□□□ -0.86
CCSER1-208ENST00000509109 CCDC146Q8IYE0 955 aa9.65□□□□□ -0.86
CCSER1-208ENST00000509109 WHAMMQ8TF30 809 aa9.65□□□□□ -0.86
CCSER1-208ENST00000509109 C7orf43Q8WVR3 580 aa9.65□□□□□ -0.86
CCSER1-208ENST00000509109 H7C1W4 665 aa9.64□□□□□ -0.87
CCSER1-208ENST00000509109 NTSR2O95665 410 aa9.64□□□□□ -0.87
CCSER1-208ENST00000509109 HOXA10P31260 410 aaPredicted RBP9.64□□□□□ -0.87
CCSER1-208ENST00000509109 HDGFL1Q5TGJ6 251 aa9.64□□□□□ -0.87
CCSER1-208ENST00000509109 ZNF34Q8IZ26 560 aa9.64□□□□□ -0.87
CCSER1-208ENST00000509109 JDP2Q8WYK2 163 aa9.64□□□□□ -0.87
CCSER1-208ENST00000509109 RBM17Q96I25 401 aaKnown RBP9.64□□□□□ -0.87
CCSER1-208ENST00000509109 PSMD1Q99460 953 aa9.64□□□□□ -0.87
CCSER1-208ENST00000509109 LAMB2P55268 1798 aa9.64□□□□□ -0.87
CCSER1-208ENST00000509109 CHL1O00533 1208 aa9.63□□□□□ -0.87
CCSER1-208ENST00000509109 IARSP41252 1262 aaKnown RBP9.63□□□□□ -0.87
CCSER1-208ENST00000509109 ZNF385CQ66K41 422 aaPredicted RBP9.63□□□□□ -0.87
CCSER1-208ENST00000509109 FOXR1Q6PIV2 292 aa9.63□□□□□ -0.87
CCSER1-208ENST00000509109 SVOPQ8N4V2 548 aa9.63□□□□□ -0.87
CCSER1-208ENST00000509109 KLRG1Q96E93 195 aa9.63□□□□□ -0.87
CCSER1-208ENST00000509109 CRAMP1Q96RY5 1269 aa9.63□□□□□ -0.87
CCSER1-208ENST00000509109 UTP14AQ9BVJ6 771 aaKnown RBP9.63□□□□□ -0.87
CCSER1-208ENST00000509109 NUCKS1Q9H1E3 243 aaKnown RBP9.63□□□□□ -0.87
CCSER1-208ENST00000509109 PRKRIP1Q9H875 184 aaPredicted RBP9.63□□□□□ -0.87
CCSER1-208ENST00000509109 DDX21Q9NR30 783 aaKnown RBP eCLIP9.63□□□□□ -0.87
CCSER1-208ENST00000509109 ZNF277Q9NRM2 450 aaPredicted RBP9.63□□□□□ -0.87
CCSER1-208ENST00000509109 LAS1LQ9Y4W2 734 aaKnown RBP9.63□□□□□ -0.87
CCSER1-208ENST00000509109 PCDHGA11Q9Y5H2 935 aa9.63□□□□□ -0.87
CCSER1-208ENST00000509109 USP17L5A8MUK1 530 aa9.62□□□□□ -0.87
CCSER1-208ENST00000509109 TMEM229AB2RXF0 380 aa9.62□□□□□ -0.87
CCSER1-208ENST00000509109 DDNO94850 711 aaPredicted RBP9.62□□□□□ -0.87
CCSER1-208ENST00000509109 PLA2G4AP47712 749 aa9.62□□□□□ -0.87
CCSER1-208ENST00000509109 SUSD4Q5VX71 490 aa9.62□□□□□ -0.87
CCSER1-208ENST00000509109 LRP10Q7Z4F1 713 aa9.62□□□□□ -0.87
CCSER1-208ENST00000509109 LDHDQ86WU2 507 aa9.62□□□□□ -0.87
CCSER1-208ENST00000509109 DNAJC5GQ8N7S2 189 aa9.62□□□□□ -0.87
CCSER1-208ENST00000509109 RHBDD1Q8TEB9 315 aa9.62□□□□□ -0.87
CCSER1-208ENST00000509109 GMCL1Q96IK5 515 aa9.62□□□□□ -0.87
CCSER1-208ENST00000509109 CHMP4AQ9BY43 222 aa9.62□□□□□ -0.87
CCSER1-208ENST00000509109 RUBCNLQ9H714 662 aa9.62□□□□□ -0.87
CCSER1-208ENST00000509109 DBF4Q9UBU7 674 aaPredicted RBP9.62□□□□□ -0.87
CCSER1-208ENST00000509109 ADAMTS8Q9UP79 889 aa9.62□□□□□ -0.87
CCSER1-208ENST00000509109 NOD1Q9Y239 953 aa9.62□□□□□ -0.87
CCSER1-208ENST00000509109 SNED1Q8TER0 1413 aa9.62□□□□□ -0.87
CCSER1-208ENST00000509109 A0A1B0GTH6 734 aa9.61□□□□□ -0.87
CCSER1-208ENST00000509109 THBS1P07996 1170 aa9.61□□□□□ -0.87
CCSER1-208ENST00000509109 SMTNP53814 917 aa9.61□□□□□ -0.87
CCSER1-208ENST00000509109 GTF2IP78347 998 aa9.61□□□□□ -0.87
CCSER1-208ENST00000509109 PROSER3Q2NL68 480 aa9.61□□□□□ -0.87
CCSER1-208ENST00000509109 TBC1D9Q6ZT07 1266 aa9.61□□□□□ -0.87
CCSER1-208ENST00000509109 COPS6Q7L5N1 327 aa9.61□□□□□ -0.87
CCSER1-208ENST00000509109 PNMA8AQ86V59 439 aaPredicted RBP9.61□□□□□ -0.87
CCSER1-208ENST00000509109 GPC2Q8N158 579 aa9.61□□□□□ -0.87
CCSER1-208ENST00000509109 XAGE3Q8WTP9 111 aa9.61□□□□□ -0.87
CCSER1-208ENST00000509109 UCN2Q96RP3 112 aa9.61□□□□□ -0.87
CCSER1-208ENST00000509109 HACL1Q9UJ83 578 aa9.61□□□□□ -0.87
CCSER1-208ENST00000509109 SH3TC1Q8TE82 1336 aa9.6□□□□□ -0.87
CCSER1-208ENST00000509109 ZNF541Q9H0D2 1346 aa9.6□□□□□ -0.87
CCSER1-208ENST00000509109 LRRC37AA6NMS7 1700 aa9.6□□□□□ -0.87
CCSER1-208ENST00000509109 DDX60Q8IY21 1712 aaKnown RBP9.6□□□□□ -0.87
CCSER1-208ENST00000509109 ANXA1P04083 346 aa9.6□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms