RNA–Protein interactions for RNA: ENST00000509109.5

CCSER1-208, Transcript of coiled-coil serine rich protein 1, humanhuman

TSL 1 (best)

Gene CCSER1, Length 1,070 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCSER1-208ENST00000509109 AEBP2Q6ZN18 517 aaPredicted RBP28.48■■■□□ 2.15
CCSER1-208ENST00000509109 CHIC1Q5VXU3 224 aa27.38■■□□□ 1.97
CCSER1-208ENST00000509109 SENP3Q9H4L4 574 aaPredicted RBP24.16■■□□□ 1.46
CCSER1-208ENST00000509109 PHF23Q9BUL5 403 aaPredicted RBP24.09■■□□□ 1.45
CCSER1-208ENST00000509109 FOXD1Q16676 465 aa22.52■■□□□ 1.2
CCSER1-208ENST00000509109 PLPPR3Q6T4P5 718 aa22.05■■□□□ 1.12
CCSER1-208ENST00000509109 PPP6R1Q9UPN7 881 aa21.4■■□□□ 1.02
CCSER1-208ENST00000509109 ADRA2BP18089 450 aa21.38■■□□□ 1.01
CCSER1-208ENST00000509109 PIAS4Q8N2W9 510 aaPredicted RBP21.16■□□□□ 0.98
CCSER1-208ENST00000509109 POTEDQ86YR6 584 aa20.98■□□□□ 0.95
CCSER1-208ENST00000509109 MSH5O43196 834 aa20.86■□□□□ 0.93
CCSER1-208ENST00000509109 MAPK8IP2Q13387 824 aaPredicted RBP19.53■□□□□ 0.72
CCSER1-208ENST00000509109 SCAF1Q9H7N4 1312 aaKnown RBP19.45■□□□□ 0.7
CCSER1-208ENST00000509109 PPP4R3CPQ6ZMV5 832 aa19.42■□□□□ 0.7
CCSER1-208ENST00000509109 DMRT2Q9Y5R5 561 aa19.23■□□□□ 0.67
CCSER1-208ENST00000509109 CNKSR2Q8WXI2 1034 aa18.93■□□□□ 0.62
CCSER1-208ENST00000509109 NCBP3Q53F19 620 aaKnown RBP18.75■□□□□ 0.59
CCSER1-208ENST00000509109 HOXD11P31277 338 aaPredicted RBP18.65■□□□□ 0.58
CCSER1-208ENST00000509109 RNF216Q9NWF9 866 aaPredicted RBP18.64■□□□□ 0.57
CCSER1-208ENST00000509109 KCNA4P22459 653 aa18.58■□□□□ 0.56
CCSER1-208ENST00000509109 DCAF8L1A6NGE4 600 aa18.54■□□□□ 0.56
CCSER1-208ENST00000509109 NPM3O75607 178 aaKnown RBP18.54■□□□□ 0.56
CCSER1-208ENST00000509109 NISCHQ9Y2I1 1504 aa18.41■□□□□ 0.54
CCSER1-208ENST00000509109 CACNB1Q02641 598 aaPredicted RBP17.97■□□□□ 0.47
CCSER1-208ENST00000509109 DNAJC5BQ9UF47 199 aa17.89■□□□□ 0.45
CCSER1-208ENST00000509109 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.86■□□□□ 0.45
CCSER1-208ENST00000509109 RNF39Q9H2S5 420 aa17.85■□□□□ 0.45
CCSER1-208ENST00000509109 SLC4A2P04920 1241 aa17.6■□□□□ 0.41
CCSER1-208ENST00000509109 SLC4A1APQ9BWU0 796 aaKnown RBP17.6■□□□□ 0.41
CCSER1-208ENST00000509109 C1QBPQ07021 282 aaKnown RBP17.59■□□□□ 0.41
CCSER1-208ENST00000509109 U3KPZ7 1027 aaPredicted RBP17.51■□□□□ 0.39
CCSER1-208ENST00000509109 SPINK5Q9NQ38 1064 aaPredicted RBP17.18■□□□□ 0.34
CCSER1-208ENST00000509109 FOXD4L1Q9NU39 408 aa17.15■□□□□ 0.34
CCSER1-208ENST00000509109 CAPN15O75808 1086 aa17.13■□□□□ 0.33
CCSER1-208ENST00000509109 MYCNP04198 464 aaPredicted RBP17.1■□□□□ 0.33
CCSER1-208ENST00000509109 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.08■□□□□ 0.32
CCSER1-208ENST00000509109 ZBTB22O15209 634 aa17.08■□□□□ 0.32
CCSER1-208ENST00000509109 HNRNPUL2Q1KMD3 747 aaKnown RBP17.08■□□□□ 0.32
CCSER1-208ENST00000509109 SAMD1Q6SPF0 538 aaPredicted RBP17.02■□□□□ 0.32
CCSER1-208ENST00000509109 APLP2Q06481 763 aa16.98■□□□□ 0.31
CCSER1-208ENST00000509109 TRHP20396 242 aaPredicted RBP16.97■□□□□ 0.31
CCSER1-208ENST00000509109 DSG3P32926 999 aa16.88■□□□□ 0.29
CCSER1-208ENST00000509109 ZNF219Q9P2Y4 722 aaPredicted RBP16.86■□□□□ 0.29
CCSER1-208ENST00000509109 ABCB7O75027 752 aa16.8■□□□□ 0.28
CCSER1-208ENST00000509109 ATF5Q9Y2D1 282 aaPredicted RBP16.75■□□□□ 0.27
CCSER1-208ENST00000509109 EHMT2Q96KQ7 1210 aa16.74■□□□□ 0.27
CCSER1-208ENST00000509109 CSRNP3Q8WYN3 585 aa16.65■□□□□ 0.26
CCSER1-208ENST00000509109 CCDC180Q9P1Z9 1646 aa16.6■□□□□ 0.25
CCSER1-208ENST00000509109 POLA2Q14181 598 aa16.57■□□□□ 0.24
CCSER1-208ENST00000509109 ATXN8OSP0DMR3 200 aa16.52■□□□□ 0.24
CCSER1-208ENST00000509109 ABCC9O60706 1549 aa16.37■□□□□ 0.21
CCSER1-208ENST00000509109 POTEHQ6S545 545 aa16.3■□□□□ 0.2
CCSER1-208ENST00000509109 ZBTB12Q9Y330 459 aaPredicted RBP16.18■□□□□ 0.18
CCSER1-208ENST00000509109 OSCARQ8IYS5 282 aa16.04■□□□□ 0.16
CCSER1-208ENST00000509109 RBM42Q9BTD8 480 aaKnown RBP16.04■□□□□ 0.16
CCSER1-208ENST00000509109 FBLN2P98095 1184 aa16.01■□□□□ 0.15
CCSER1-208ENST00000509109 MKRN4PQ13434 485 aaPredicted RBP15.97■□□□□ 0.15
CCSER1-208ENST00000509109 AKT1S1Q96B36 256 aa15.78■□□□□ 0.12
CCSER1-208ENST00000509109 SPDYE2BA6NHP3 402 aa15.73■□□□□ 0.11
CCSER1-208ENST00000509109 SPDYE6P0CI01 402 aa15.73■□□□□ 0.11
CCSER1-208ENST00000509109 SPDYE2Q495Y8 402 aa15.73■□□□□ 0.11
CCSER1-208ENST00000509109 RB1CC1Q8TDY2 1594 aa15.72■□□□□ 0.11
CCSER1-208ENST00000509109 REM2Q8IYK8 340 aaPredicted RBP15.67■□□□□ 0.1
CCSER1-208ENST00000509109 ZNF692Q9BU19 519 aaPredicted RBP15.67■□□□□ 0.1
CCSER1-208ENST00000509109 NACADO15069 1562 aa15.62■□□□□ 0.09
CCSER1-208ENST00000509109 CHRDL2Q6WN34 429 aa15.58■□□□□ 0.08
CCSER1-208ENST00000509109 SSUH2Q9Y2M2 353 aa15.57■□□□□ 0.08
CCSER1-208ENST00000509109 PITPNM1O00562 1244 aa15.52■□□□□ 0.08
CCSER1-208ENST00000509109 PABPN1Q86U42 306 aaKnown RBP eCLIP15.46■□□□□ 0.07
CCSER1-208ENST00000509109 MYO15BQ96JP2 1530 aa15.45■□□□□ 0.06
CCSER1-208ENST00000509109 SPDYE4A6NLX3 237 aa15.42■□□□□ 0.06
CCSER1-208ENST00000509109 CLEC11AQ9Y240 323 aa15.42■□□□□ 0.06
CCSER1-208ENST00000509109 DCAF8L2P0C7V8 631 aa15.41■□□□□ 0.06
CCSER1-208ENST00000509109 SPDYE1Q8NFV5 336 aaPredicted RBP15.38■□□□□ 0.05
CCSER1-208ENST00000509109 UNC13AQ9UPW8 1703 aa15.35■□□□□ 0.05
CCSER1-208ENST00000509109 PIP4P2Q8N4L2 257 aa15.32■□□□□ 0.04
CCSER1-208ENST00000509109 ZCCHC6Q5VYS8 1495 aaKnown RBP15.3■□□□□ 0.04
CCSER1-208ENST00000509109 DCAF1Q9Y4B6 1507 aa15.27■□□□□ 0.04
CCSER1-208ENST00000509109 FXR2P51116 673 aaKnown RBP eCLIP15.25■□□□□ 0.03
CCSER1-208ENST00000509109 PRR29P0C7W0 189 aa15.18■□□□□ 0.02
CCSER1-208ENST00000509109 BICRAQ9NZM4 1560 aa15.18■□□□□ 0.02
CCSER1-208ENST00000509109 PRKAR2AP13861 404 aaKnown RBP15.13■□□□□ 0.01
CCSER1-208ENST00000509109 SHROOM4Q9ULL8 1493 aa15.13■□□□□ 0.01
CCSER1-208ENST00000509109 FKBP8Q14318 412 aa15.11■□□□□ 0.01
CCSER1-208ENST00000509109 CHADLQ6NUI6 762 aa15.09■□□□□ 0.01
CCSER1-208ENST00000509109 SP7Q8TDD2 431 aaPredicted RBP15.06■□□□□ 0
CCSER1-208ENST00000509109 STAG3Q9UJ98 1225 aa15.05■□□□□ -0
CCSER1-208ENST00000509109 SCRIBQ14160 1630 aa15.05■□□□□ -0
CCSER1-208ENST00000509109 PROM2Q8N271 834 aa15.03■□□□□ -0
CCSER1-208ENST00000509109 HAX1O00165 279 aa14.96□□□□□ -0.01
CCSER1-208ENST00000509109 CREBZFQ9NS37 354 aa14.89□□□□□ -0.03
CCSER1-208ENST00000509109 EIF4G1Q04637 1599 aaKnown RBP14.85□□□□□ -0.03
CCSER1-208ENST00000509109 FARP1Q9Y4F1 1045 aaPredicted RBP14.84□□□□□ -0.03
CCSER1-208ENST00000509109 CC2D2AQ9P2K1 1620 aa14.84□□□□□ -0.03
CCSER1-208ENST00000509109 EVX2Q03828 476 aa14.82□□□□□ -0.04
CCSER1-208ENST00000509109 CECR2Q9BXF3 1484 aa14.76□□□□□ -0.05
CCSER1-208ENST00000509109 C19orf67A6NJJ6 358 aa14.75□□□□□ -0.05
CCSER1-208ENST00000509109 MIER1Q8N108 512 aa14.69□□□□□ -0.06
CCSER1-208ENST00000509109 CD44P16070 742 aaKnown RBP14.67□□□□□ -0.06
CCSER1-208ENST00000509109 MNX1P50219 401 aaPredicted RBP14.66□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms