RNA–Protein interactions for RNA: ENST00000476983.5

CLK2-205, Transcript of CDC like kinase 2, humanhuman

TSL 1 (best)

Gene CLK2, Length 1,885 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK2-205ENST00000476983 MYO3BQ8WXR4 1341 aa23.48■■□□□ 1.35
CLK2-205ENST00000476983 MCM2P49736 904 aa23.48■■□□□ 1.35
CLK2-205ENST00000476983 CIAPIN1Q6FI81 312 aa23.48■■□□□ 1.35
CLK2-205ENST00000476983 NKX2-3Q8TAU0 364 aa23.48■■□□□ 1.35
CLK2-205ENST00000476983 ECM29Q5VYK3 1845 aa23.48■■□□□ 1.35
CLK2-205ENST00000476983 HMGB1P09429 215 aaKnown RBP23.47■■□□□ 1.35
CLK2-205ENST00000476983 APOBEC3HQ6NTF7 200 aaKnown RBP23.47■■□□□ 1.35
CLK2-205ENST00000476983 DHX32Q7L7V1 743 aaKnown RBP23.47■■□□□ 1.35
CLK2-205ENST00000476983 USP40Q9NVE5 1235 aa23.47■■□□□ 1.35
CLK2-205ENST00000476983 MKRN1Q9UHC7 482 aaKnown RBP23.47■■□□□ 1.35
CLK2-205ENST00000476983 SAP30BPQ9UHR5 308 aaKnown RBP23.47■■□□□ 1.35
CLK2-205ENST00000476983 TRDNQ13061 729 aa23.47■■□□□ 1.35
CLK2-205ENST00000476983 PICALMQ13492 652 aa23.47■■□□□ 1.35
CLK2-205ENST00000476983 AKNAD1Q5T1N1 836 aa23.47■■□□□ 1.35
CLK2-205ENST00000476983 Q6ZUG5 572 aa23.47■■□□□ 1.35
CLK2-205ENST00000476983 MB21D2Q8IYB1 491 aaPredicted RBP23.47■■□□□ 1.35
CLK2-205ENST00000476983 TMX3Q96JJ7 454 aa23.47■■□□□ 1.35
CLK2-205ENST00000476983 ZDHHC15Q96MV8 337 aa23.47■■□□□ 1.35
CLK2-205ENST00000476983 TOMM22Q9NS69 142 aa23.47■■□□□ 1.35
CLK2-205ENST00000476983 ARPP21Q9UBL0 812 aaPredicted RBP23.47■■□□□ 1.35
CLK2-205ENST00000476983 FLT1P17948 1338 aa23.46■■□□□ 1.35
CLK2-205ENST00000476983 DDX60LQ5H9U9 1706 aaKnown RBP23.46■■□□□ 1.35
CLK2-205ENST00000476983 B4E1Z4 1266 aa23.46■■□□□ 1.35
CLK2-205ENST00000476983 YBX3P16989 372 aaKnown RBP eCLIP23.46■■□□□ 1.35
CLK2-205ENST00000476983 HDLBPQ00341 1268 aaKnown RBP23.46■■□□□ 1.35
CLK2-205ENST00000476983 TOB2Q14106 344 aaPredicted RBP23.46■■□□□ 1.35
CLK2-205ENST00000476983 RRP12Q5JTH9 1297 aaKnown RBP23.46■■□□□ 1.35
CLK2-205ENST00000476983 CDC42EP5Q6NZY7 148 aa23.46■■□□□ 1.35
CLK2-205ENST00000476983 STAG1Q8WVM7 1258 aa23.46■■□□□ 1.35
CLK2-205ENST00000476983 GMLQ99445 158 aa23.46■■□□□ 1.35
CLK2-205ENST00000476983 SLKQ9H2G2 1235 aaPredicted RBP23.46■■□□□ 1.35
CLK2-205ENST00000476983 SERPINA10Q9UK55 444 aa23.46■■□□□ 1.35
CLK2-205ENST00000476983 MYH1P12882 1939 aa23.46■■□□□ 1.35
CLK2-205ENST00000476983 HSP90AA1P07900 732 aaKnown RBP23.45■■□□□ 1.35
CLK2-205ENST00000476983 EXOSC10Q01780 885 aaKnown RBP23.45■■□□□ 1.35
CLK2-205ENST00000476983 CFAP100Q494V2 611 aa23.45■■□□□ 1.35
CLK2-205ENST00000476983 MFSD6Q6ZSS7 791 aa23.45■■□□□ 1.35
CLK2-205ENST00000476983 ANAPC4Q9UJX5 808 aa23.45■■□□□ 1.35
CLK2-205ENST00000476983 IL27Q8NEV9 243 aa23.45■■□□□ 1.34
CLK2-205ENST00000476983 MRIQ9BWK5 157 aa23.45■■□□□ 1.34
CLK2-205ENST00000476983 ANTXR2P58335 489 aa23.44■■□□□ 1.34
CLK2-205ENST00000476983 FGD1P98174 961 aa23.44■■□□□ 1.34
CLK2-205ENST00000476983 PRC1O43663 620 aa23.43■■□□□ 1.34
CLK2-205ENST00000476983 WDHD1O75717 1129 aaPredicted RBP23.43■■□□□ 1.34
CLK2-205ENST00000476983 LARGE1O95461 756 aa23.43■■□□□ 1.34
CLK2-205ENST00000476983 SBK1Q52WX2 424 aa23.43■■□□□ 1.34
CLK2-205ENST00000476983 CYB5R4Q7L1T6 521 aa23.43■■□□□ 1.34
CLK2-205ENST00000476983 DDX4Q9NQI0 724 aaKnown RBP23.43■■□□□ 1.34
CLK2-205ENST00000476983 LIMCH1Q9UPQ0 1083 aa23.43■■□□□ 1.34
CLK2-205ENST00000476983 SBF1O95248 1867 aa23.43■■□□□ 1.34
CLK2-205ENST00000476983 POLR3DP05423 398 aaPredicted RBP23.43■■□□□ 1.34
CLK2-205ENST00000476983 MCM5P33992 734 aa23.43■■□□□ 1.34
CLK2-205ENST00000476983 CACNB3P54284 484 aa23.43■■□□□ 1.34
CLK2-205ENST00000476983 EIF6P56537 245 aaKnown RBP23.43■■□□□ 1.34
CLK2-205ENST00000476983 TNIP1Q15025 636 aa23.43■■□□□ 1.34
CLK2-205ENST00000476983 AGBL3Q8NEM8 1001 aa23.43■■□□□ 1.34
CLK2-205ENST00000476983 ALDH8A1Q9H2A2 487 aaPredicted RBP23.43■■□□□ 1.34
CLK2-205ENST00000476983 RNF41Q9H4P4 317 aaPredicted RBP23.43■■□□□ 1.34
CLK2-205ENST00000476983 HDAC9Q9UKV0 1011 aa23.43■■□□□ 1.34
CLK2-205ENST00000476983 DICER1Q9UPY3 1922 aaKnown RBP23.42■■□□□ 1.34
CLK2-205ENST00000476983 KDM4AO75164 1064 aa23.42■■□□□ 1.34
CLK2-205ENST00000476983 PRDM1O75626 825 aa23.42■■□□□ 1.34
CLK2-205ENST00000476983 BRF1Q92994 677 aa23.42■■□□□ 1.34
CLK2-205ENST00000476983 GPHNQ9NQX3 736 aaPredicted RBP23.42■■□□□ 1.34
CLK2-205ENST00000476983 TPCN1Q9ULQ1 816 aa23.42■■□□□ 1.34
CLK2-205ENST00000476983 GJA3Q9Y6H8 435 aa23.42■■□□□ 1.34
CLK2-205ENST00000476983 FZD9O00144 591 aa23.41■■□□□ 1.34
CLK2-205ENST00000476983 ANKRD1Q15327 319 aa23.41■■□□□ 1.34
CLK2-205ENST00000476983 C12orf60Q5U649 245 aa23.41■■□□□ 1.34
CLK2-205ENST00000476983 AMOTL1Q8IY63 956 aa23.41■■□□□ 1.34
CLK2-205ENST00000476983 OGFOD1Q8N543 542 aa23.41■■□□□ 1.34
CLK2-205ENST00000476983 KRT23Q9C075 422 aa23.41■■□□□ 1.34
CLK2-205ENST00000476983 CNNM2Q9H8M5 875 aa23.41■■□□□ 1.34
CLK2-205ENST00000476983 ZNF541Q9H0D2 1346 aa23.41■■□□□ 1.34
CLK2-205ENST00000476983 SHTN1A0MZ66 631 aa23.41■■□□□ 1.34
CLK2-205ENST00000476983 LMNB1P20700 586 aa23.41■■□□□ 1.34
CLK2-205ENST00000476983 NFIAQ12857 509 aa23.41■■□□□ 1.34
CLK2-205ENST00000476983 DYNLL2Q96FJ2 89 aa23.41■■□□□ 1.34
CLK2-205ENST00000476983 PRMT6Q96LA8 375 aaPredicted RBP23.41■■□□□ 1.34
CLK2-205ENST00000476983 TDRD3Q9H7E2 651 aaKnown RBP23.41■■□□□ 1.34
CLK2-205ENST00000476983 PLCD1P51178 756 aa23.4■■□□□ 1.34
CLK2-205ENST00000476983 ME3Q16798 604 aa23.39■■□□□ 1.34
CLK2-205ENST00000476983 SLC3A2P08195 630 aaKnown RBP23.39■■□□□ 1.33
CLK2-205ENST00000476983 APOBRQ0VD83 1088 aa23.39■■□□□ 1.33
CLK2-205ENST00000476983 ZSWIM5Q9P217 1185 aa23.39■■□□□ 1.33
CLK2-205ENST00000476983 STK3Q13188 491 aa23.38■■□□□ 1.33
CLK2-205ENST00000476983 DLGAP5Q15398 846 aa23.38■■□□□ 1.33
CLK2-205ENST00000476983 DDX52Q9Y2R4 599 aaKnown RBP eCLIP23.38■■□□□ 1.33
CLK2-205ENST00000476983 SPDYE2BA6NHP3 402 aa23.37■■□□□ 1.33
CLK2-205ENST00000476983 SPDYE6P0CI01 402 aa23.37■■□□□ 1.33
CLK2-205ENST00000476983 GMPSP49915 693 aaPredicted RBP23.37■■□□□ 1.33
CLK2-205ENST00000476983 NECAB1Q8N987 351 aa23.37■■□□□ 1.33
CLK2-205ENST00000476983 ZSCAN31Q96LW9 406 aaPredicted RBP23.37■■□□□ 1.33
CLK2-205ENST00000476983 ZKSCAN3Q9BRR0 538 aa23.37■■□□□ 1.33
CLK2-205ENST00000476983 OSBPL5Q9H0X9 879 aaPredicted RBP23.37■■□□□ 1.33
CLK2-205ENST00000476983 ROBO3Q96MS0 1386 aa23.37■■□□□ 1.33
CLK2-205ENST00000476983 WDR19Q8NEZ3 1342 aa23.37■■□□□ 1.33
CLK2-205ENST00000476983 SOCS7O14512 581 aa23.36■■□□□ 1.33
CLK2-205ENST00000476983 RANBP6O60518 1105 aaKnown RBP23.36■■□□□ 1.33
CLK2-205ENST00000476983 TCP10Q12799 353 aa23.36■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms