RNA–Protein interactions for RNA: ENST00000473073.1

PCCB-211, Transcript of propionyl-CoA carboxylase subunit beta, humanhuman

TSL 2

Gene PCCB, Length 1,964 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCCB-211ENST00000473073 B4E1Z4 1266 aa14.93□□□□□ -0.02
PCCB-211ENST00000473073 HSP90AA1P07900 732 aaKnown RBP14.93□□□□□ -0.02
PCCB-211ENST00000473073 PICALMQ13492 652 aa14.93□□□□□ -0.02
PCCB-211ENST00000473073 RRP12Q5JTH9 1297 aaKnown RBP14.93□□□□□ -0.02
PCCB-211ENST00000473073 APOBEC3HQ6NTF7 200 aaKnown RBP14.93□□□□□ -0.02
PCCB-211ENST00000473073 RALYLQ86SE5 291 aaKnown RBP14.93□□□□□ -0.02
PCCB-211ENST00000473073 MB21D2Q8IYB1 491 aaPredicted RBP14.93□□□□□ -0.02
PCCB-211ENST00000473073 NCOA7Q8NI08 942 aa14.93□□□□□ -0.02
PCCB-211ENST00000473073 GPHNQ9NQX3 736 aaPredicted RBP14.93□□□□□ -0.02
PCCB-211ENST00000473073 TOMM22Q9NS69 142 aa14.93□□□□□ -0.02
PCCB-211ENST00000473073 MKRN1Q9UHC7 482 aaKnown RBP14.93□□□□□ -0.02
PCCB-211ENST00000473073 FLT1P17948 1338 aa14.92□□□□□ -0.02
PCCB-211ENST00000473073 DTNBO60941 627 aa14.92□□□□□ -0.02
PCCB-211ENST00000473073 VIL1P09327 827 aaKnown RBP14.92□□□□□ -0.02
PCCB-211ENST00000473073 CACNB3P54284 484 aa14.92□□□□□ -0.02
PCCB-211ENST00000473073 AKNAD1Q5T1N1 836 aa14.92□□□□□ -0.02
PCCB-211ENST00000473073 GIMAP6Q6P9H5 292 aa14.92□□□□□ -0.02
PCCB-211ENST00000473073 HHIPL2Q6UWX4 724 aa14.92□□□□□ -0.02
PCCB-211ENST00000473073 DHX32Q7L7V1 743 aaKnown RBP14.92□□□□□ -0.02
PCCB-211ENST00000473073 LTBP3Q9NS15 1303 aa14.92□□□□□ -0.02
PCCB-211ENST00000473073 PRDM1O75626 825 aa14.91□□□□□ -0.02
PCCB-211ENST00000473073 YBX3P16989 372 aaKnown RBP eCLIP14.91□□□□□ -0.02
PCCB-211ENST00000473073 ANTXR2P58335 489 aa14.91□□□□□ -0.02
PCCB-211ENST00000473073 EXOSC10Q01780 885 aaKnown RBP14.91□□□□□ -0.02
PCCB-211ENST00000473073 CDC42EP5Q6NZY7 148 aa14.91□□□□□ -0.02
PCCB-211ENST00000473073 MFSD6Q6ZSS7 791 aa14.91□□□□□ -0.02
PCCB-211ENST00000473073 CYB5R4Q7L1T6 521 aa14.91□□□□□ -0.02
PCCB-211ENST00000473073 USP40Q9NVE5 1235 aa14.91□□□□□ -0.02
PCCB-211ENST00000473073 TPCN1Q9ULQ1 816 aa14.91□□□□□ -0.02
PCCB-211ENST00000473073 DDX60LQ5H9U9 1706 aaKnown RBP14.91□□□□□ -0.02
PCCB-211ENST00000473073 SHTN1A0MZ66 631 aa14.91□□□□□ -0.02
PCCB-211ENST00000473073 HMGB1P09429 215 aaKnown RBP14.91□□□□□ -0.02
PCCB-211ENST00000473073 PLCG2P16885 1265 aa14.91□□□□□ -0.02
PCCB-211ENST00000473073 MCM2P49736 904 aa14.91□□□□□ -0.02
PCCB-211ENST00000473073 FGD1P98174 961 aa14.91□□□□□ -0.02
PCCB-211ENST00000473073 TRDNQ13061 729 aa14.91□□□□□ -0.02
PCCB-211ENST00000473073 STAG1Q8WVM7 1258 aa14.91□□□□□ -0.02
PCCB-211ENST00000473073 BRF1Q92994 677 aa14.91□□□□□ -0.02
PCCB-211ENST00000473073 ZDHHC15Q96MV8 337 aa14.91□□□□□ -0.02
PCCB-211ENST00000473073 DDX4Q9NQI0 724 aaKnown RBP14.91□□□□□ -0.02
PCCB-211ENST00000473073 LIMCH1Q9UPQ0 1083 aa14.91□□□□□ -0.02
PCCB-211ENST00000473073 FOCADQ5VW36 1801 aa14.91□□□□□ -0.02
PCCB-211ENST00000473073 ECM29Q5VYK3 1845 aa14.9□□□□□ -0.02
PCCB-211ENST00000473073 PRC1O43663 620 aa14.9□□□□□ -0.02
PCCB-211ENST00000473073 KDM4AO75164 1064 aa14.9□□□□□ -0.02
PCCB-211ENST00000473073 CFAP100Q494V2 611 aa14.9□□□□□ -0.02
PCCB-211ENST00000473073 CIAPIN1Q6FI81 312 aa14.9□□□□□ -0.02
PCCB-211ENST00000473073 GMLQ99445 158 aa14.9□□□□□ -0.02
PCCB-211ENST00000473073 ARPP21Q9UBL0 812 aaPredicted RBP14.9□□□□□ -0.02
PCCB-211ENST00000473073 WDHD1O75717 1129 aaPredicted RBP14.89□□□□□ -0.03
PCCB-211ENST00000473073 PLCD1P51178 756 aa14.89□□□□□ -0.03
PCCB-211ENST00000473073 NFIAQ12857 509 aa14.89□□□□□ -0.03
PCCB-211ENST00000473073 STK3Q13188 491 aa14.89□□□□□ -0.03
PCCB-211ENST00000473073 ME3Q16798 604 aa14.89□□□□□ -0.03
PCCB-211ENST00000473073 DYNLL2Q96FJ2 89 aa14.89□□□□□ -0.03
PCCB-211ENST00000473073 ANAPC4Q9UJX5 808 aa14.89□□□□□ -0.03
PCCB-211ENST00000473073 SERPINA10Q9UK55 444 aa14.89□□□□□ -0.03
PCCB-211ENST00000473073 MYO3BQ8WXR4 1341 aa14.89□□□□□ -0.03
PCCB-211ENST00000473073 MCM5P33992 734 aa14.89□□□□□ -0.03
PCCB-211ENST00000473073 APOBRQ0VD83 1088 aa14.89□□□□□ -0.03
PCCB-211ENST00000473073 CERS3Q8IU89 383 aa14.89□□□□□ -0.03
PCCB-211ENST00000473073 NECAB1Q8N987 351 aa14.89□□□□□ -0.03
PCCB-211ENST00000473073 ZKSCAN3Q9BRR0 538 aa14.89□□□□□ -0.03
PCCB-211ENST00000473073 TDRD3Q9H7E2 651 aaKnown RBP14.89□□□□□ -0.03
PCCB-211ENST00000473073 MYH1P12882 1939 aa14.88□□□□□ -0.03
PCCB-211ENST00000473073 ZNF541Q9H0D2 1346 aa14.88□□□□□ -0.03
PCCB-211ENST00000473073 POLR3DP05423 398 aaPredicted RBP14.88□□□□□ -0.03
PCCB-211ENST00000473073 SBK1Q52WX2 424 aa14.88□□□□□ -0.03
PCCB-211ENST00000473073 C12orf60Q5U649 245 aa14.88□□□□□ -0.03
PCCB-211ENST00000473073 PRMT6Q96LA8 375 aaPredicted RBP14.88□□□□□ -0.03
PCCB-211ENST00000473073 ZSWIM5Q9P217 1185 aa14.88□□□□□ -0.03
PCCB-211ENST00000473073 GJA3Q9Y6H8 435 aa14.88□□□□□ -0.03
PCCB-211ENST00000473073 HDLBPQ00341 1268 aaKnown RBP14.87□□□□□ -0.03
PCCB-211ENST00000473073 ST3GAL1Q11201 340 aa14.87□□□□□ -0.03
PCCB-211ENST00000473073 TCP10Q12799 353 aa14.87□□□□□ -0.03
PCCB-211ENST00000473073 CCDC83Q8IWF9 413 aa14.87□□□□□ -0.03
PCCB-211ENST00000473073 SLC44A5Q8NCS7 719 aa14.87□□□□□ -0.03
PCCB-211ENST00000473073 ALDH8A1Q9H2A2 487 aaPredicted RBP14.87□□□□□ -0.03
PCCB-211ENST00000473073 SENP2Q9HC62 589 aa14.87□□□□□ -0.03
PCCB-211ENST00000473073 NAP1L2Q9ULW6 460 aaPredicted RBP14.87□□□□□ -0.03
PCCB-211ENST00000473073 FZD9O00144 591 aa14.87□□□□□ -0.03
PCCB-211ENST00000473073 ANKRD1Q15327 319 aa14.87□□□□□ -0.03
PCCB-211ENST00000473073 RAB11FIP4Q86YS3 637 aa14.87□□□□□ -0.03
PCCB-211ENST00000473073 ZFPM1Q8IX07 1006 aa14.87□□□□□ -0.03
PCCB-211ENST00000473073 AGBL3Q8NEM8 1001 aa14.87□□□□□ -0.03
PCCB-211ENST00000473073 MRIQ9BWK5 157 aa14.87□□□□□ -0.03
PCCB-211ENST00000473073 KRT23Q9C075 422 aa14.87□□□□□ -0.03
PCCB-211ENST00000473073 RNF41Q9H4P4 317 aaPredicted RBP14.87□□□□□ -0.03
PCCB-211ENST00000473073 CNNM2Q9H8M5 875 aa14.87□□□□□ -0.03
PCCB-211ENST00000473073 RANBP6O60518 1105 aaKnown RBP14.86□□□□□ -0.03
PCCB-211ENST00000473073 EIF6P56537 245 aaKnown RBP14.86□□□□□ -0.03
PCCB-211ENST00000473073 CUL4AQ13619 759 aa14.86□□□□□ -0.03
PCCB-211ENST00000473073 OGFOD1Q8N543 542 aa14.86□□□□□ -0.03
PCCB-211ENST00000473073 SBF1O95248 1867 aa14.86□□□□□ -0.03
PCCB-211ENST00000473073 CLRN2A0PK11 232 aa14.85□□□□□ -0.03
PCCB-211ENST00000473073 SLURP2P0DP57 97 aa14.85□□□□□ -0.03
PCCB-211ENST00000473073 LMNB1P20700 586 aa14.85□□□□□ -0.03
PCCB-211ENST00000473073 TNIP1Q15025 636 aa14.85□□□□□ -0.03
PCCB-211ENST00000473073 FAM47AQ5JRC9 791 aa14.85□□□□□ -0.03
PCCB-211ENST00000473073 AMOTL1Q8IY63 956 aa14.85□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms