RNA–Protein interactions for RNA: ENST00000457745.1

RIF1-208, Transcript of replication timing regulatory factor 1, humanhuman

TSL 1 (best)

Gene RIF1, Length 1,006 nt, Biotype processed transcript, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-208ENST00000457745 RPS6KB1P23443 525 aa10.42□□□□□ -0.74
RIF1-208ENST00000457745 BTDP43251 543 aa10.42□□□□□ -0.74
RIF1-208ENST00000457745 ALX1Q15699 326 aa10.42□□□□□ -0.74
RIF1-208ENST00000457745 DALRD3Q5D0E6 543 aaKnown RBP10.42□□□□□ -0.74
RIF1-208ENST00000457745 CYB5R4Q7L1T6 521 aa10.42□□□□□ -0.74
RIF1-208ENST00000457745 DZIP1Q86YF9 867 aaKnown RBP10.42□□□□□ -0.74
RIF1-208ENST00000457745 MB21D2Q8IYB1 491 aaPredicted RBP10.42□□□□□ -0.74
RIF1-208ENST00000457745 PSMD1Q99460 953 aa10.42□□□□□ -0.74
RIF1-208ENST00000457745 EYA3Q99504 573 aa10.42□□□□□ -0.74
RIF1-208ENST00000457745 TMEM106CQ9BVX2 250 aa10.42□□□□□ -0.74
RIF1-208ENST00000457745 DDX4Q9NQI0 724 aaKnown RBP10.42□□□□□ -0.74
RIF1-208ENST00000457745 BMP2KQ9NSY1 1161 aaPredicted RBP10.42□□□□□ -0.74
RIF1-208ENST00000457745 MYH1P12882 1939 aa10.41□□□□□ -0.74
RIF1-208ENST00000457745 GPR75-ASB3A0A0A6YYF3 556 aa10.41□□□□□ -0.74
RIF1-208ENST00000457745 RAD17O75943 681 aa10.41□□□□□ -0.74
RIF1-208ENST00000457745 USP17L8P0C7I0 530 aa10.41□□□□□ -0.74
RIF1-208ENST00000457745 EXOSC10Q01780 885 aaKnown RBP10.41□□□□□ -0.74
RIF1-208ENST00000457745 CC2D2BQ6DHV5 1058 aa10.41□□□□□ -0.74
RIF1-208ENST00000457745 ASTLQ6HA08 431 aaPredicted RBP10.41□□□□□ -0.74
RIF1-208ENST00000457745 CTR9Q6PD62 1173 aa10.41□□□□□ -0.74
RIF1-208ENST00000457745 KIAA0825Q8IV33 1275 aa10.41□□□□□ -0.74
RIF1-208ENST00000457745 SLC39A7Q92504 469 aa10.41□□□□□ -0.74
RIF1-208ENST00000457745 TMX3Q96JJ7 454 aa10.41□□□□□ -0.74
RIF1-208ENST00000457745 GMLQ99445 158 aa10.41□□□□□ -0.74
RIF1-208ENST00000457745 TM6SF1Q9BZW5 370 aa10.41□□□□□ -0.74
RIF1-208ENST00000457745 SLKQ9H2G2 1235 aaPredicted RBP10.41□□□□□ -0.74
RIF1-208ENST00000457745 SPON1Q9HCB6 807 aa10.41□□□□□ -0.74
RIF1-208ENST00000457745 DCP1AQ9NPI6 582 aaPredicted RBP10.41□□□□□ -0.74
RIF1-208ENST00000457745 TPCN1Q9ULQ1 816 aa10.41□□□□□ -0.74
RIF1-208ENST00000457745 TTF2Q9UNY4 1162 aaKnown RBP10.41□□□□□ -0.74
RIF1-208ENST00000457745 ZMYM6O95789 1325 aa10.4□□□□□ -0.74
RIF1-208ENST00000457745 PSMD14O00487 310 aa10.4□□□□□ -0.74
RIF1-208ENST00000457745 RIOK3O14730 519 aaKnown RBP10.4□□□□□ -0.74
RIF1-208ENST00000457745 APPP05067 770 aa10.4□□□□□ -0.74
RIF1-208ENST00000457745 YBX3P16989 372 aaKnown RBP eCLIP10.4□□□□□ -0.74
RIF1-208ENST00000457745 IARSP41252 1262 aaKnown RBP10.4□□□□□ -0.74
RIF1-208ENST00000457745 CACNB3P54284 484 aa10.4□□□□□ -0.74
RIF1-208ENST00000457745 PPP4CP60510 307 aa10.4□□□□□ -0.74
RIF1-208ENST00000457745 LRRFIP1Q32MZ4 808 aaKnown RBP10.4□□□□□ -0.74
RIF1-208ENST00000457745 APOBEC3HQ6NTF7 200 aaKnown RBP10.4□□□□□ -0.74
RIF1-208ENST00000457745 PODNQ7Z5L7 613 aa10.4□□□□□ -0.74
RIF1-208ENST00000457745 RAB11FIP4Q86YS3 637 aa10.4□□□□□ -0.74
RIF1-208ENST00000457745 MAPKAPK5Q8IW41 473 aa10.4□□□□□ -0.74
RIF1-208ENST00000457745 HSCBQ8IWL3 235 aa10.4□□□□□ -0.74
RIF1-208ENST00000457745 ZFPM1Q8IX07 1006 aa10.4□□□□□ -0.74
RIF1-208ENST00000457745 LARGE2Q8N3Y3 721 aa10.4□□□□□ -0.74
RIF1-208ENST00000457745 NECAB1Q8N987 351 aa10.4□□□□□ -0.74
RIF1-208ENST00000457745 PDRG1Q9NUG6 133 aa10.4□□□□□ -0.74
RIF1-208ENST00000457745 ZNF541Q9H0D2 1346 aa10.39□□□□□ -0.75
RIF1-208ENST00000457745 TTLL13PA6NNM8 815 aa10.39□□□□□ -0.75
RIF1-208ENST00000457745 B4E1Z4 1266 aa10.39□□□□□ -0.75
RIF1-208ENST00000457745 WDHD1O75717 1129 aaPredicted RBP10.39□□□□□ -0.75
RIF1-208ENST00000457745 PSEN1P49768 467 aa10.39□□□□□ -0.75
RIF1-208ENST00000457745 ATN1P54259 1190 aaPredicted RBP10.39□□□□□ -0.75
RIF1-208ENST00000457745 CXCL9Q07325 125 aa10.39□□□□□ -0.75
RIF1-208ENST00000457745 NFIAQ12857 509 aa10.39□□□□□ -0.75
RIF1-208ENST00000457745 PDAP1Q13442 181 aaKnown RBP10.39□□□□□ -0.75
RIF1-208ENST00000457745 PKP1Q13835 747 aa10.39□□□□□ -0.75
RIF1-208ENST00000457745 ME3Q16798 604 aa10.39□□□□□ -0.75
RIF1-208ENST00000457745 STRIP1Q5VSL9 837 aa10.39□□□□□ -0.75
RIF1-208ENST00000457745 SPTY2D1Q68D10 685 aaPredicted RBP10.39□□□□□ -0.75
RIF1-208ENST00000457745 BLOC1S2Q6QNY1 142 aa10.39□□□□□ -0.75
RIF1-208ENST00000457745 MAMSTRQ6ZN01 415 aa10.39□□□□□ -0.75
RIF1-208ENST00000457745 RTKN2Q8IZC4 609 aa10.39□□□□□ -0.75
RIF1-208ENST00000457745 SLC44A5Q8NCS7 719 aa10.39□□□□□ -0.75
RIF1-208ENST00000457745 TGFBRAP1Q8WUH2 860 aa10.39□□□□□ -0.75
RIF1-208ENST00000457745 DYNLL2Q96FJ2 89 aa10.39□□□□□ -0.75
RIF1-208ENST00000457745 NEK1Q96PY6 1258 aa10.39□□□□□ -0.75
RIF1-208ENST00000457745 NAPBQ9H115 298 aa10.39□□□□□ -0.75
RIF1-208ENST00000457745 SAP30BPQ9UHR5 308 aaKnown RBP10.39□□□□□ -0.75
RIF1-208ENST00000457745 DICER1Q9UPY3 1922 aaKnown RBP10.39□□□□□ -0.75
RIF1-208ENST00000457745 USP17L3A6NCW0 530 aa10.38□□□□□ -0.75
RIF1-208ENST00000457745 USP17L4A6NCW7 530 aa10.38□□□□□ -0.75
RIF1-208ENST00000457745 MINDY4BA8MYZ0 360 aa10.38□□□□□ -0.75
RIF1-208ENST00000457745 USP17L12C9JPN9 530 aa10.38□□□□□ -0.75
RIF1-208ENST00000457745 USP17L21D6R901 530 aa10.38□□□□□ -0.75
RIF1-208ENST00000457745 PRDM1O75626 825 aa10.38□□□□□ -0.75
RIF1-208ENST00000457745 EGFRP00533 1210 aa10.38□□□□□ -0.75
RIF1-208ENST00000457745 CRKP46108 304 aa10.38□□□□□ -0.75
RIF1-208ENST00000457745 TDO2P48775 406 aa10.38□□□□□ -0.75
RIF1-208ENST00000457745 PPARAQ07869 468 aa10.38□□□□□ -0.75
RIF1-208ENST00000457745 CUL4AQ13619 759 aa10.38□□□□□ -0.75
RIF1-208ENST00000457745 CDC42EP5Q6NZY7 148 aa10.38□□□□□ -0.75
RIF1-208ENST00000457745 Q6ZUG5 572 aa10.38□□□□□ -0.75
RIF1-208ENST00000457745 USP17L1Q7RTZ2 530 aa10.38□□□□□ -0.75
RIF1-208ENST00000457745 SUPT20HQ8NEM7 779 aa10.38□□□□□ -0.75
RIF1-208ENST00000457745 TBC1D22AQ8WUA7 517 aa10.38□□□□□ -0.75
RIF1-208ENST00000457745 CHAMP1Q96JM3 812 aa10.38□□□□□ -0.75
RIF1-208ENST00000457745 SYT17Q9BSW7 474 aa10.38□□□□□ -0.75
RIF1-208ENST00000457745 TAOK3Q9H2K8 898 aa10.38□□□□□ -0.75
RIF1-208ENST00000457745 BRPF3Q9ULD4 1205 aa10.38□□□□□ -0.75
RIF1-208ENST00000457745 DDX52Q9Y2R4 599 aaKnown RBP eCLIP10.38□□□□□ -0.75
RIF1-208ENST00000457745 CYP46A1Q9Y6A2 500 aa10.38□□□□□ -0.75
RIF1-208ENST00000457745 FLT1P17948 1338 aa10.37□□□□□ -0.75
RIF1-208ENST00000457745 ZNF213O14771 459 aa10.37□□□□□ -0.75
RIF1-208ENST00000457745 EIF5BO60841 1220 aaKnown RBP10.37□□□□□ -0.75
RIF1-208ENST00000457745 VIL1P09327 827 aaKnown RBP10.37□□□□□ -0.75
RIF1-208ENST00000457745 ZKSCAN1P17029 563 aaPredicted RBP10.37□□□□□ -0.75
RIF1-208ENST00000457745 PLCD1P51178 756 aa10.37□□□□□ -0.75
RIF1-208ENST00000457745 APOBRQ0VD83 1088 aa10.37□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 472.9 ms