RNA–Protein interactions for RNA: ENST00000420239.6

CHD2-202, Transcript of chromodomain helicase DNA binding protein 2, humanhuman

TSL 1 (best) BASIC

Gene CHD2, Length 2,221 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2-202ENST00000420239 CCDC91Q7Z6B0 441 aa7.02□□□□□ -1.29
CHD2-202ENST00000420239 TMEM139Q8IV31 216 aa7.02□□□□□ -1.29
CHD2-202ENST00000420239 SYMPKQ92797 1274 aaKnown RBP7.02□□□□□ -1.29
CHD2-202ENST00000420239 MAP3K19Q56UN5 1328 aa7.02□□□□□ -1.29
CHD2-202ENST00000420239 IGSF1Q8N6C5 1336 aa7.02□□□□□ -1.29
CHD2-202ENST00000420239 CCDC151A5D8V7 595 aa7.01□□□□□ -1.29
CHD2-202ENST00000420239 TMEM88BA6NKF7 163 aa7.01□□□□□ -1.29
CHD2-202ENST00000420239 SRGAP3O43295 1099 aa7.01□□□□□ -1.29
CHD2-202ENST00000420239 TXLNAP40222 546 aa7.01□□□□□ -1.29
CHD2-202ENST00000420239 BRD3Q15059 726 aa7.01□□□□□ -1.29
CHD2-202ENST00000420239 BEND6Q5SZJ8 279 aaPredicted RBP7.01□□□□□ -1.29
CHD2-202ENST00000420239 NAA16Q6N069 864 aaPredicted RBP7.01□□□□□ -1.29
CHD2-202ENST00000420239 FCHSD1Q86WN1 690 aa7.01□□□□□ -1.29
CHD2-202ENST00000420239 FAM177A1Q8N128 213 aaPredicted RBP7.01□□□□□ -1.29
CHD2-202ENST00000420239 GOLGA1Q92805 767 aa7.01□□□□□ -1.29
CHD2-202ENST00000420239 DHX58Q96C10 678 aa7.01□□□□□ -1.29
CHD2-202ENST00000420239 MPHOSPH8Q99549 860 aa7.01□□□□□ -1.29
CHD2-202ENST00000420239 LLPHQ9BRT6 129 aaKnown RBP7.01□□□□□ -1.29
CHD2-202ENST00000420239 ZBED2Q9BTP6 218 aa7.01□□□□□ -1.29
CHD2-202ENST00000420239 ANKZF1Q9H8Y5 726 aa7.01□□□□□ -1.29
CHD2-202ENST00000420239 SEPT9Q9UHD8 586 aaPredicted RBP7.01□□□□□ -1.29
CHD2-202ENST00000420239 KDM3BQ7LBC6 1761 aa7.01□□□□□ -1.29
CHD2-202ENST00000420239 PTPRUQ92729 1446 aa7.01□□□□□ -1.29
CHD2-202ENST00000420239 KINO60870 393 aaKnown RBP7.01□□□□□ -1.29
CHD2-202ENST00000420239 FAM160A1Q05DH4 1040 aa7.01□□□□□ -1.29
CHD2-202ENST00000420239 NR6A1Q15406 480 aa7.01□□□□□ -1.29
CHD2-202ENST00000420239 PLEKHO1Q53GL0 409 aaPredicted RBP7.01□□□□□ -1.29
CHD2-202ENST00000420239 CCDC73Q6ZRK6 1079 aa7.01□□□□□ -1.29
CHD2-202ENST00000420239 TADA2BQ86TJ2 420 aa7.01□□□□□ -1.29
CHD2-202ENST00000420239 ERC1Q8IUD2 1116 aa7.01□□□□□ -1.29
CHD2-202ENST00000420239 EFCAB13Q8IY85 973 aa7.01□□□□□ -1.29
CHD2-202ENST00000420239 FSIP1Q8NA03 581 aa7.01□□□□□ -1.29
CHD2-202ENST00000420239 DPF2Q92785 391 aa7.01□□□□□ -1.29
CHD2-202ENST00000420239 GPATCH3Q96I76 525 aa7.01□□□□□ -1.29
CHD2-202ENST00000420239 CEP89Q96ST8 783 aa7.01□□□□□ -1.29
CHD2-202ENST00000420239 PNKPQ96T60 521 aa7.01□□□□□ -1.29
CHD2-202ENST00000420239 NAT10Q9H0A0 1025 aaKnown RBP7.01□□□□□ -1.29
CHD2-202ENST00000420239 HSD3B7Q9H2F3 369 aa7.01□□□□□ -1.29
CHD2-202ENST00000420239 SUGCTQ9HAC7 445 aa7.01□□□□□ -1.29
CHD2-202ENST00000420239 MKRN1Q9UHC7 482 aaKnown RBP7.01□□□□□ -1.29
CHD2-202ENST00000420239 PPP2R2CQ9Y2T4 447 aa7.01□□□□□ -1.29
CHD2-202ENST00000420239 MAFBQ9Y5Q3 323 aaPredicted RBP7.01□□□□□ -1.29
CHD2-202ENST00000420239 IVNS1ABPQ9Y6Y0 642 aa7.01□□□□□ -1.29
CHD2-202ENST00000420239 SBNO1A3KN83 1393 aa7□□□□□ -1.29
CHD2-202ENST00000420239 PRR36Q9H6K5 1346 aa7□□□□□ -1.29
CHD2-202ENST00000420239 POTEB2H3BUK9 544 aa7□□□□□ -1.29
CHD2-202ENST00000420239 FOXO3O43524 673 aa7□□□□□ -1.29
CHD2-202ENST00000420239 ATP1A3P13637 1013 aa7□□□□□ -1.29
CHD2-202ENST00000420239 FANCCQ00597 558 aa7□□□□□ -1.29
CHD2-202ENST00000420239 KRT32Q14532 448 aa7□□□□□ -1.29
CHD2-202ENST00000420239 PTPN21Q16825 1174 aa7□□□□□ -1.29
CHD2-202ENST00000420239 HSP90AB2PQ58FF8 381 aa7□□□□□ -1.29
CHD2-202ENST00000420239 DNAJC21Q5F1R6 531 aaKnown RBP7□□□□□ -1.29
CHD2-202ENST00000420239 BEND3Q5T5X7 828 aa7□□□□□ -1.29
CHD2-202ENST00000420239 KCNV1Q6PIU1 500 aa7□□□□□ -1.29
CHD2-202ENST00000420239 DHX37Q8IY37 1157 aaKnown RBP7□□□□□ -1.29
CHD2-202ENST00000420239 FMR1NBQ8N0W7 255 aaPredicted RBP7□□□□□ -1.29
CHD2-202ENST00000420239 CLASRPQ8N2M8 674 aaKnown RBP7□□□□□ -1.29
CHD2-202ENST00000420239 CNNM3Q8NE01 707 aa7□□□□□ -1.29
CHD2-202ENST00000420239 USP28Q96RU2 1077 aa7□□□□□ -1.29
CHD2-202ENST00000420239 UTP14AQ9BVJ6 771 aaKnown RBP7□□□□□ -1.29
CHD2-202ENST00000420239 BICC1Q9H694 974 aaKnown RBP7□□□□□ -1.29
CHD2-202ENST00000420239 SUFUQ9UMX1 484 aa7□□□□□ -1.29
CHD2-202ENST00000420239 LAMA4Q16363 1823 aa7□□□□□ -1.29
CHD2-202ENST00000420239 USP54Q70EL1 1684 aa7□□□□□ -1.29
CHD2-202ENST00000420239 NWD1Q149M9 1564 aa7□□□□□ -1.29
CHD2-202ENST00000420239 MRC1P22897 1456 aa7□□□□□ -1.29
CHD2-202ENST00000420239 USP6P35125 1406 aa7□□□□□ -1.29
CHD2-202ENST00000420239 NCAPD2Q15021 1401 aa7□□□□□ -1.29
CHD2-202ENST00000420239 RFX7Q2KHR2 1363 aa7□□□□□ -1.29
CHD2-202ENST00000420239 A0A1W2PQ27 194 aa7□□□□□ -1.29
CHD2-202ENST00000420239 A0A1W2PQ64 194 aa7□□□□□ -1.29
CHD2-202ENST00000420239 A0A1W2PQD8 194 aa7□□□□□ -1.29
CHD2-202ENST00000420239 TMEM232C9JQI7 657 aa7□□□□□ -1.29
CHD2-202ENST00000420239 NRDCO43847 1150 aa7□□□□□ -1.29
CHD2-202ENST00000420239 ALDH1L1O75891 902 aa7□□□□□ -1.29
CHD2-202ENST00000420239 HOXB7P09629 217 aa7□□□□□ -1.29
CHD2-202ENST00000420239 USP5P45974 858 aa7□□□□□ -1.29
CHD2-202ENST00000420239 GNG11P61952 73 aa7□□□□□ -1.29
CHD2-202ENST00000420239 NMIQ13287 307 aaPredicted RBP7□□□□□ -1.29
CHD2-202ENST00000420239 JAKMIP3Q5VZ66 844 aa7□□□□□ -1.29
CHD2-202ENST00000420239 WWC2Q6AWC2 1192 aa7□□□□□ -1.29
CHD2-202ENST00000420239 HNRNPLLQ8WVV9 542 aaKnown RBP7□□□□□ -1.29
CHD2-202ENST00000420239 FAM227BQ96M60 508 aa7□□□□□ -1.29
CHD2-202ENST00000420239 CARD10Q9BWT7 1032 aa7□□□□□ -1.29
CHD2-202ENST00000420239 RAB21Q9UL25 225 aa7□□□□□ -1.29
CHD2-202ENST00000420239 FLT4P35916 1363 aa6.99□□□□□ -1.29
CHD2-202ENST00000420239 A0A087WUV0 522 aaPredicted RBP6.99□□□□□ -1.29
CHD2-202ENST00000420239 PPFIA4O75335 1185 aa6.99□□□□□ -1.29
CHD2-202ENST00000420239 TAF7Q15545 349 aaPredicted RBP6.99□□□□□ -1.29
CHD2-202ENST00000420239 ISM2Q6H9L7 571 aa6.99□□□□□ -1.29
CHD2-202ENST00000420239 TOGARAM2Q6ZUX3 1019 aa6.99□□□□□ -1.29
CHD2-202ENST00000420239 HDXQ7Z353 690 aa6.99□□□□□ -1.29
CHD2-202ENST00000420239 MSANTD4Q8NCY6 345 aa6.99□□□□□ -1.29
CHD2-202ENST00000420239 ZNF396Q96N95 335 aaPredicted RBP6.99□□□□□ -1.29
CHD2-202ENST00000420239 CLIC6Q96NY7 704 aa6.99□□□□□ -1.29
CHD2-202ENST00000420239 ZSWIM4Q9H7M6 989 aa6.99□□□□□ -1.29
CHD2-202ENST00000420239 ABCB6Q9NP58 842 aa6.99□□□□□ -1.29
CHD2-202ENST00000420239 L1RE1Q9UN81 338 aa6.99□□□□□ -1.29
CHD2-202ENST00000420239 BIN1O00499 593 aa6.99□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms