RNA–Protein interactions for RNA: ENST00000399084.5

HLA-DQB1-204, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

APPRIS P1 BASIC

Gene HLA-DQB1, Length 1,734 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-204ENST00000399084 PPP6R2O75170 966 aa20.56■□□□□ 0.88
HLA-DQB1-204ENST00000399084 CEBPZQ03701 1054 aaKnown RBP20.56■□□□□ 0.88
HLA-DQB1-204ENST00000399084 SLC39A14Q15043 492 aa20.56■□□□□ 0.88
HLA-DQB1-204ENST00000399084 TRAPPC3LQ5T215 181 aa20.56■□□□□ 0.88
HLA-DQB1-204ENST00000399084 BICDL1Q6ZP65 573 aa20.56■□□□□ 0.88
HLA-DQB1-204ENST00000399084 TDRD7Q8NHU6 1098 aaKnown RBP20.56■□□□□ 0.88
HLA-DQB1-204ENST00000399084 GJD4Q96KN9 370 aaPredicted RBP20.56■□□□□ 0.88
HLA-DQB1-204ENST00000399084 UBAC1Q9BSL1 405 aa20.56■□□□□ 0.88
HLA-DQB1-204ENST00000399084 PRKAB2O43741 272 aa20.56■□□□□ 0.88
HLA-DQB1-204ENST00000399084 RFC4P35249 363 aa20.56■□□□□ 0.88
HLA-DQB1-204ENST00000399084 KIAA2012Q0VF49 1180 aa20.56■□□□□ 0.88
HLA-DQB1-204ENST00000399084 STX1AQ16623 288 aa20.56■□□□□ 0.88
HLA-DQB1-204ENST00000399084 ANO6Q4KMQ2 910 aa20.56■□□□□ 0.88
HLA-DQB1-204ENST00000399084 KRT40Q6A162 431 aa20.56■□□□□ 0.88
HLA-DQB1-204ENST00000399084 ARHGAP30Q7Z6I6 1101 aaPredicted RBP20.56■□□□□ 0.88
HLA-DQB1-204ENST00000399084 MICU3Q86XE3 530 aa20.56■□□□□ 0.88
HLA-DQB1-204ENST00000399084 CKAP2LQ8IYA6 745 aa20.56■□□□□ 0.88
HLA-DQB1-204ENST00000399084 FSIP1Q8NA03 581 aa20.56■□□□□ 0.88
HLA-DQB1-204ENST00000399084 ARHGEF1Q92888 912 aaKnown RBP20.56■□□□□ 0.88
HLA-DQB1-204ENST00000399084 FAM217BQ9NTX9 383 aaPredicted RBP20.56■□□□□ 0.88
HLA-DQB1-204ENST00000399084 EIF2AK3Q9NZJ5 1116 aaKnown RBP20.56■□□□□ 0.88
HLA-DQB1-204ENST00000399084 LEMD3Q9Y2U8 911 aa20.56■□□□□ 0.88
HLA-DQB1-204ENST00000399084 CMA1P23946 247 aa20.55■□□□□ 0.88
HLA-DQB1-204ENST00000399084 CDC27P30260 824 aa20.55■□□□□ 0.88
HLA-DQB1-204ENST00000399084 ZNF165P49910 485 aa20.55■□□□□ 0.88
HLA-DQB1-204ENST00000399084 SAFBQ15424 915 aaKnown RBP eCLIP20.55■□□□□ 0.88
HLA-DQB1-204ENST00000399084 FMR1NBQ8N0W7 255 aaPredicted RBP20.55■□□□□ 0.88
HLA-DQB1-204ENST00000399084 TIGD1Q96MW7 591 aa20.55■□□□□ 0.88
HLA-DQB1-204ENST00000399084 NAT10Q9H0A0 1025 aaKnown RBP20.55■□□□□ 0.88
HLA-DQB1-204ENST00000399084 EIF4ENIF1Q9NRA8 985 aaKnown RBP20.55■□□□□ 0.88
HLA-DQB1-204ENST00000399084 ATP8A2Q9NTI2 1148 aa20.55■□□□□ 0.88
HLA-DQB1-204ENST00000399084 ANO10Q9NW15 660 aa20.55■□□□□ 0.88
HLA-DQB1-204ENST00000399084 CALM1P0DP23 149 aa20.54■□□□□ 0.88
HLA-DQB1-204ENST00000399084 CALM2P0DP24 149 aa20.54■□□□□ 0.88
HLA-DQB1-204ENST00000399084 CALM3P0DP25 149 aa20.54■□□□□ 0.88
HLA-DQB1-204ENST00000399084 FOSBP53539 338 aa20.54■□□□□ 0.88
HLA-DQB1-204ENST00000399084 RTN1Q16799 776 aa20.54■□□□□ 0.88
HLA-DQB1-204ENST00000399084 MIGA1Q8NAN2 632 aa20.54■□□□□ 0.88
HLA-DQB1-204ENST00000399084 CBX8Q9HC52 389 aa20.54■□□□□ 0.88
HLA-DQB1-204ENST00000399084 CASZ1Q86V15 1759 aa20.54■□□□□ 0.88
HLA-DQB1-204ENST00000399084 DEXIO95424 95 aa20.53■□□□□ 0.88
HLA-DQB1-204ENST00000399084 POLR3DP05423 398 aaPredicted RBP20.53■□□□□ 0.88
HLA-DQB1-204ENST00000399084 SLC3A2P08195 630 aaKnown RBP20.53■□□□□ 0.88
HLA-DQB1-204ENST00000399084 TM4SF1P30408 202 aa20.53■□□□□ 0.88
HLA-DQB1-204ENST00000399084 C15orf52Q6ZUT6 534 aaKnown RBP20.53■□□□□ 0.88
HLA-DQB1-204ENST00000399084 CERS3Q8IU89 383 aa20.53■□□□□ 0.88
HLA-DQB1-204ENST00000399084 CACNA1SQ13698 1873 aa20.53■□□□□ 0.88
HLA-DQB1-204ENST00000399084 TAF1LQ8IZX4 1826 aa20.53■□□□□ 0.88
HLA-DQB1-204ENST00000399084 GNL2Q13823 731 aaKnown RBP20.53■□□□□ 0.88
HLA-DQB1-204ENST00000399084 FANCBQ8NB91 859 aa20.53■□□□□ 0.88
HLA-DQB1-204ENST00000399084 NSUN4Q96CB9 384 aaKnown RBP20.53■□□□□ 0.88
HLA-DQB1-204ENST00000399084 NOL10Q9BSC4 688 aaKnown RBP20.53■□□□□ 0.88
HLA-DQB1-204ENST00000399084 CRNKL1Q9BZJ0 848 aaKnown RBP20.53■□□□□ 0.88
HLA-DQB1-204ENST00000399084 BCL11BQ9C0K0 894 aaPredicted RBP20.53■□□□□ 0.88
HLA-DQB1-204ENST00000399084 SRP68Q9UHB9 627 aaKnown RBP20.53■□□□□ 0.88
HLA-DQB1-204ENST00000399084 SBK1Q52WX2 424 aa20.52■□□□□ 0.88
HLA-DQB1-204ENST00000399084 IQCA1Q86XH1 822 aa20.52■□□□□ 0.88
HLA-DQB1-204ENST00000399084 FOXP1Q9H334 677 aaPredicted RBP20.52■□□□□ 0.88
HLA-DQB1-204ENST00000399084 TOMM22Q9NS69 142 aa20.52■□□□□ 0.88
HLA-DQB1-204ENST00000399084 CLIC4Q9Y696 253 aa20.52■□□□□ 0.88
HLA-DQB1-204ENST00000399084 MORC2Q9Y6X9 1032 aaPredicted RBP20.52■□□□□ 0.88
HLA-DQB1-204ENST00000399084 FAM237AA0A1B0GTK4 181 aa20.51■□□□□ 0.87
HLA-DQB1-204ENST00000399084 ORC4O43929 436 aa20.51■□□□□ 0.87
HLA-DQB1-204ENST00000399084 XBP1P17861 261 aa20.51■□□□□ 0.87
HLA-DQB1-204ENST00000399084 SEC23AQ15436 765 aa20.51■□□□□ 0.87
HLA-DQB1-204ENST00000399084 OTUD7BQ6GQQ9 843 aa20.51■□□□□ 0.87
HLA-DQB1-204ENST00000399084 CRACR2BQ8N4Y2 399 aaPredicted RBP20.51■□□□□ 0.87
HLA-DQB1-204ENST00000399084 WDR66Q8TBY9 1149 aa20.51■□□□□ 0.87
HLA-DQB1-204ENST00000399084 SDF4Q9BRK5 362 aa20.51■□□□□ 0.87
HLA-DQB1-204ENST00000399084 RNF26Q9BY78 433 aaPredicted RBP20.51■□□□□ 0.87
HLA-DQB1-204ENST00000399084 GOLPH3LQ9H4A5 285 aa20.51■□□□□ 0.87
HLA-DQB1-204ENST00000399084 RBM28Q9NW13 759 aaKnown RBP20.51■□□□□ 0.87
HLA-DQB1-204ENST00000399084 COL1A1P02452 1464 aaPredicted RBP20.51■□□□□ 0.87
HLA-DQB1-204ENST00000399084 RBM6P78332 1123 aaKnown RBP20.5■□□□□ 0.87
HLA-DQB1-204ENST00000399084 RRP12Q5JTH9 1297 aaKnown RBP20.5■□□□□ 0.87
HLA-DQB1-204ENST00000399084 SARM1Q6SZW1 724 aa20.5■□□□□ 0.87
HLA-DQB1-204ENST00000399084 ADGRA1Q86SQ6 560 aa20.5■□□□□ 0.87
HLA-DQB1-204ENST00000399084 ELOA2Q8IYF1 753 aaPredicted RBP20.5■□□□□ 0.87
HLA-DQB1-204ENST00000399084 ZNF654Q8IZM8 581 aa20.5■□□□□ 0.87
HLA-DQB1-204ENST00000399084 GNL3Q9BVP2 549 aaKnown RBP eCLIP20.5■□□□□ 0.87
HLA-DQB1-204ENST00000399084 FTOQ9C0B1 505 aaKnown RBP eCLIP20.5■□□□□ 0.87
HLA-DQB1-204ENST00000399084 TRPC5Q9UL62 973 aaPredicted RBP20.5■□□□□ 0.87
HLA-DQB1-204ENST00000399084 GOLGA6L19H0YKK7 550 aa20.5■□□□□ 0.87
HLA-DQB1-204ENST00000399084 RANBP6O60518 1105 aaKnown RBP20.5■□□□□ 0.87
HLA-DQB1-204ENST00000399084 GRAPQ13588 217 aa20.5■□□□□ 0.87
HLA-DQB1-204ENST00000399084 GRAPLQ8TC17 118 aaPredicted RBP20.5■□□□□ 0.87
HLA-DQB1-204ENST00000399084 ZSCAN10Q96SZ4 725 aaPredicted RBP20.5■□□□□ 0.87
HLA-DQB1-204ENST00000399084 SLC26A6Q9BXS9 759 aa20.5■□□□□ 0.87
HLA-DQB1-204ENST00000399084 SENP2Q9HC62 589 aa20.5■□□□□ 0.87
HLA-DQB1-204ENST00000399084 IQSEC3Q9UPP2 1182 aaPredicted RBP20.5■□□□□ 0.87
HLA-DQB1-204ENST00000399084 TACC3Q9Y6A5 838 aa20.5■□□□□ 0.87
HLA-DQB1-204ENST00000399084 COL4A1P02462 1669 aa20.49■□□□□ 0.87
HLA-DQB1-204ENST00000399084 MINDY4BA8MYZ0 360 aa20.49■□□□□ 0.87
HLA-DQB1-204ENST00000399084 KIF28PB7ZC32 967 aa20.49■□□□□ 0.87
HLA-DQB1-204ENST00000399084 NPHP1O15259 732 aa20.49■□□□□ 0.87
HLA-DQB1-204ENST00000399084 CDC25BP30305 580 aa20.49■□□□□ 0.87
HLA-DQB1-204ENST00000399084 KCNQ4P56696 695 aa20.49■□□□□ 0.87
HLA-DQB1-204ENST00000399084 ZRSR1Q15695 479 aaKnown RBP20.49■□□□□ 0.87
HLA-DQB1-204ENST00000399084 RILPL1Q5EBL4 403 aa20.49■□□□□ 0.87
HLA-DQB1-204ENST00000399084 AXDND1Q5T1B0 1012 aaPredicted RBP20.49■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms