RNA–Protein interactions for RNA: ENST00000397007.8

NUP98-205, Transcript of nucleoporin 98, humanhuman

TSL 1 (best) BASIC

Gene NUP98, Length 3,698 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-205ENST00000397007 LDHCP07864 332 aa12.81□□□□□ -0.36
NUP98-205ENST00000397007 CYP7A1P22680 504 aa12.81□□□□□ -0.36
NUP98-205ENST00000397007 DLGAP5Q15398 846 aa12.81□□□□□ -0.36
NUP98-205ENST00000397007 ANGEL2Q5VTE6 544 aaKnown RBP12.81□□□□□ -0.36
NUP98-205ENST00000397007 DDX24Q9GZR7 859 aaKnown RBP eCLIP12.81□□□□□ -0.365e-7■■■□□ 17.8
NUP98-205ENST00000397007 LRP2BPQ9P2M1 347 aa12.81□□□□□ -0.36
NUP98-205ENST00000397007 NKX2-3Q8TAU0 364 aa12.81□□□□□ -0.36
NUP98-205ENST00000397007 ABCF2Q9UG63 623 aa12.81□□□□□ -0.36
NUP98-205ENST00000397007 DDTLA6NHG4 134 aaPredicted RBP12.8□□□□□ -0.36
NUP98-205ENST00000397007 MCMDC2Q4G0Z9 681 aa12.8□□□□□ -0.36
NUP98-205ENST00000397007 DZIP1Q86YF9 867 aaKnown RBP12.8□□□□□ -0.36
NUP98-205ENST00000397007 DSCC1Q9BVC3 393 aa12.8□□□□□ -0.36
NUP98-205ENST00000397007 ATP8A2Q9NTI2 1148 aa12.8□□□□□ -0.36
NUP98-205ENST00000397007 DDX52Q9Y2R4 599 aaKnown RBP eCLIP12.8□□□□□ -0.36
NUP98-205ENST00000397007 CCDC171Q6TFL3 1326 aa12.8□□□□□ -0.36
NUP98-205ENST00000397007 GPAA1O43292 621 aa12.8□□□□□ -0.36
NUP98-205ENST00000397007 RRP1BQ14684 758 aaKnown RBP12.8□□□□□ -0.36
NUP98-205ENST00000397007 NOL9Q5SY16 702 aaKnown RBP12.8□□□□□ -0.36
NUP98-205ENST00000397007 LDLRAD1Q5T700 205 aa12.8□□□□□ -0.36
NUP98-205ENST00000397007 VPS53Q5VIR6 699 aa12.8□□□□□ -0.36
NUP98-205ENST00000397007 AATFQ9NY61 560 aaKnown RBP eCLIP12.8□□□□□ -0.36
NUP98-205ENST00000397007 LMOD1P29536 600 aaPredicted RBP12.8□□□□□ -0.36
NUP98-205ENST00000397007 OGFOD1Q8N543 542 aa12.8□□□□□ -0.36
NUP98-205ENST00000397007 HHIPL1Q96JK4 782 aa12.8□□□□□ -0.36
NUP98-205ENST00000397007 ESYT1Q9BSJ8 1104 aa12.8□□□□□ -0.36
NUP98-205ENST00000397007 PLXNB2O15031 1838 aa12.79□□□□□ -0.36
NUP98-205ENST00000397007 COL11A1P12107 1806 aaPredicted RBP12.79□□□□□ -0.36
NUP98-205ENST00000397007 MAGEB6P1A0A0J9YX57 407 aa12.79□□□□□ -0.36
NUP98-205ENST00000397007 HIP1O00291 1037 aa12.79□□□□□ -0.36
NUP98-205ENST00000397007 PRKAB2O43741 272 aa12.79□□□□□ -0.36
NUP98-205ENST00000397007 IDH1O75874 414 aaKnown RBP12.79□□□□□ -0.36
NUP98-205ENST00000397007 PLCG2P16885 1265 aa12.79□□□□□ -0.36
NUP98-205ENST00000397007 MAP4K1Q92918 833 aa12.79□□□□□ -0.36
NUP98-205ENST00000397007 RAI14Q9P0K7 980 aa12.79□□□□□ -0.36
NUP98-205ENST00000397007 IGKV6D-41A0A0C4DH26 115 aa12.79□□□□□ -0.36
NUP98-205ENST00000397007 F8W031 263 aaPredicted RBP12.79□□□□□ -0.36
NUP98-205ENST00000397007 SMIM22K7EJ46 135 aa12.79□□□□□ -0.36
NUP98-205ENST00000397007 HSPD1P10809 573 aaKnown RBP12.79□□□□□ -0.36
NUP98-205ENST00000397007 TSGA10IPQ3SY00 556 aa12.79□□□□□ -0.36
NUP98-205ENST00000397007 CTR9Q6PD62 1173 aa12.79□□□□□ -0.36
NUP98-205ENST00000397007 PATL2C9JE40 543 aaKnown RBP12.78□□□□□ -0.36
NUP98-205ENST00000397007 MBD4O95243 580 aa12.78□□□□□ -0.36
NUP98-205ENST00000397007 C12orf60Q5U649 245 aa12.78□□□□□ -0.36
NUP98-205ENST00000397007 USP40Q9NVE5 1235 aa12.78□□□□□ -0.36
NUP98-205ENST00000397007 MGAMO43451 1857 aa12.78□□□□□ -0.36
NUP98-205ENST00000397007 ADM5C9JUS6 153 aa12.78□□□□□ -0.36
NUP98-205ENST00000397007 G3V3G9 751 aa12.78□□□□□ -0.36
NUP98-205ENST00000397007 GNAT2P19087 354 aa12.78□□□□□ -0.36
NUP98-205ENST00000397007 RGS3P49796 1198 aa12.78□□□□□ -0.36
NUP98-205ENST00000397007 DCAF8Q5TAQ9 597 aa12.78□□□□□ -0.36
NUP98-205ENST00000397007 DEFB129Q9H1M3 183 aa12.78□□□□□ -0.36
NUP98-205ENST00000397007 ARMT1Q9H993 441 aa12.78□□□□□ -0.36
NUP98-205ENST00000397007 DLK2Q6UY11 383 aa12.78□□□□□ -0.36
NUP98-205ENST00000397007 CDCA5Q96FF9 252 aa12.78□□□□□ -0.36
NUP98-205ENST00000397007 GPBP1L1Q9HC44 474 aaPredicted RBP12.78□□□□□ -0.36
NUP98-205ENST00000397007 DDX55Q8NHQ9 600 aaKnown RBP eCLIP12.77□□□□□ -0.36
NUP98-205ENST00000397007 FSD1Q9BTV5 496 aa12.77□□□□□ -0.36
NUP98-205ENST00000397007 LCTP09848 1927 aa12.77□□□□□ -0.36
NUP98-205ENST00000397007 USP2O75604 605 aaPredicted RBP12.77□□□□□ -0.37
NUP98-205ENST00000397007 JAG1P78504 1218 aa12.77□□□□□ -0.37
NUP98-205ENST00000397007 NECTIN1Q15223 517 aa12.77□□□□□ -0.37
NUP98-205ENST00000397007 CCDC129Q6ZRS4 1044 aa12.77□□□□□ -0.37
NUP98-205ENST00000397007 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.77□□□□□ -0.37
NUP98-205ENST00000397007 TMEM39BQ9GZU3 492 aa12.77□□□□□ -0.37
NUP98-205ENST00000397007 C16orf86Q6ZW13 317 aa12.77□□□□□ -0.37
NUP98-205ENST00000397007 CDC37L1Q7L3B6 337 aa12.77□□□□□ -0.37
NUP98-205ENST00000397007 SMC1BQ8NDV3 1235 aa12.77□□□□□ -0.37
NUP98-205ENST00000397007 FAM155AB1AL88 458 aaPredicted RBP12.76□□□□□ -0.37
NUP98-205ENST00000397007 PTH1RQ03431 593 aa12.76□□□□□ -0.37
NUP98-205ENST00000397007 RASA3Q14644 834 aa12.76□□□□□ -0.37
NUP98-205ENST00000397007 MIGA1Q8NAN2 632 aa12.76□□□□□ -0.37
NUP98-205ENST00000397007 ZNF236Q9UL36 1845 aa12.76□□□□□ -0.37
NUP98-205ENST00000397007 BAG3O95817 575 aa12.76□□□□□ -0.37
NUP98-205ENST00000397007 GUCY1A2P33402 732 aa12.76□□□□□ -0.37
NUP98-205ENST00000397007 SHMT1P34896 483 aa12.76□□□□□ -0.37
NUP98-205ENST00000397007 PLCD1P51178 756 aa12.76□□□□□ -0.37
NUP98-205ENST00000397007 FKBP1BP68106 108 aa12.76□□□□□ -0.37
NUP98-205ENST00000397007 FMR1Q06787 632 aaKnown RBP eCLIP12.76□□□□□ -0.377e-8■■■□□ 17.9
NUP98-205ENST00000397007 IFNL3Q8IZI9 196 aa12.76□□□□□ -0.37
NUP98-205ENST00000397007 GLIS2Q9BZE0 524 aaPredicted RBP12.76□□□□□ -0.37
NUP98-205ENST00000397007 LRRC37A2A6NM11 1700 aa12.76□□□□□ -0.37
NUP98-205ENST00000397007 FRAT2O75474 233 aaPredicted RBP12.76□□□□□ -0.37
NUP98-205ENST00000397007 CACNB3P54284 484 aa12.76□□□□□ -0.37
NUP98-205ENST00000397007 MOGSQ13724 837 aa12.76□□□□□ -0.37
NUP98-205ENST00000397007 DHX36Q9H2U1 1008 aaKnown RBP12.76□□□□□ -0.37
NUP98-205ENST00000397007 KLRG1Q96E93 195 aa12.75□□□□□ -0.37
NUP98-205ENST00000397007 CDC45O75419 566 aa12.75□□□□□ -0.37
NUP98-205ENST00000397007 LRRFIP1Q32MZ4 808 aaKnown RBP12.75□□□□□ -0.37
NUP98-205ENST00000397007 SDR42E1Q8WUS8 393 aa12.75□□□□□ -0.37
NUP98-205ENST00000397007 CLRN2A0PK11 232 aa12.75□□□□□ -0.37
NUP98-205ENST00000397007 TRAF5O00463 557 aa12.75□□□□□ -0.37
NUP98-205ENST00000397007 NBPF12Q5TAG4 269 aaPredicted RBP12.75□□□□□ -0.37
NUP98-205ENST00000397007 TLL2Q9Y6L7 1015 aa12.75□□□□□ -0.37
NUP98-205ENST00000397007 NT5C2P49902 561 aa12.74□□□□□ -0.37
NUP98-205ENST00000397007 TNFAIP1Q13829 316 aa12.74□□□□□ -0.37
NUP98-205ENST00000397007 TEX11Q8IYF3 940 aa12.74□□□□□ -0.37
NUP98-205ENST00000397007 FBXW7Q969H0 707 aa12.74□□□□□ -0.37
NUP98-205ENST00000397007 ARPP21Q9UBL0 812 aaPredicted RBP12.74□□□□□ -0.37
NUP98-205ENST00000397007 MAP1SQ66K74 1059 aaPredicted RBP12.74□□□□□ -0.37
NUP98-205ENST00000397007 TAF6LQ9Y6J9 622 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms