RNA–Protein interactions for RNA: ENST00000371558.6

UBE2A-202, Transcript of ubiquitin conjugating enzyme E2 A, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene UBE2A, Length 1,874 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2A-202ENST00000371558 IL27Q8NEV9 243 aa17.03■□□□□ 0.32
UBE2A-202ENST00000371558 NKX2-3Q8TAU0 364 aa17.03■□□□□ 0.32
UBE2A-202ENST00000371558 SYT17Q9BSW7 474 aa17.03■□□□□ 0.32
UBE2A-202ENST00000371558 MCM9Q9NXL9 1143 aa17.03■□□□□ 0.32
UBE2A-202ENST00000371558 LIMCH1Q9UPQ0 1083 aa17.03■□□□□ 0.32
UBE2A-202ENST00000371558 B4E1Z4 1266 aa17.02■□□□□ 0.32
UBE2A-202ENST00000371558 USP17L8P0C7I0 530 aa17.02■□□□□ 0.32
UBE2A-202ENST00000371558 CYP2D6P10635 497 aa17.02■□□□□ 0.32
UBE2A-202ENST00000371558 PLCG2P16885 1265 aa17.02■□□□□ 0.32
UBE2A-202ENST00000371558 TOB2Q14106 344 aaPredicted RBP17.02■□□□□ 0.32
UBE2A-202ENST00000371558 RRP12Q5JTH9 1297 aaKnown RBP17.02■□□□□ 0.32
UBE2A-202ENST00000371558 AKNAD1Q5T1N1 836 aa17.02■□□□□ 0.32
UBE2A-202ENST00000371558 RSBN1LQ6PCB5 846 aaPredicted RBP17.02■□□□□ 0.32
UBE2A-202ENST00000371558 HHIPL2Q6UWX4 724 aa17.02■□□□□ 0.32
UBE2A-202ENST00000371558 MFSD6Q6ZSS7 791 aa17.02■□□□□ 0.32
UBE2A-202ENST00000371558 CERS3Q8IU89 383 aa17.02■□□□□ 0.32
UBE2A-202ENST00000371558 MB21D2Q8IYB1 491 aaPredicted RBP17.02■□□□□ 0.32
UBE2A-202ENST00000371558 ZBTB12Q9Y330 459 aaPredicted RBP17.02■□□□□ 0.32
UBE2A-202ENST00000371558 LARGE1O95461 756 aa17.01■□□□□ 0.31
UBE2A-202ENST00000371558 PRELPP51888 382 aa17.01■□□□□ 0.31
UBE2A-202ENST00000371558 EXOSC10Q01780 885 aaKnown RBP17.01■□□□□ 0.31
UBE2A-202ENST00000371558 ARPP21Q9UBL0 812 aaPredicted RBP17.01■□□□□ 0.31
UBE2A-202ENST00000371558 SAP30BPQ9UHR5 308 aaKnown RBP17.01■□□□□ 0.31
UBE2A-202ENST00000371558 VIL1P09327 827 aaKnown RBP17.01■□□□□ 0.31
UBE2A-202ENST00000371558 MCM5P33992 734 aa17.01■□□□□ 0.31
UBE2A-202ENST00000371558 ANKRD1Q15327 319 aa17.01■□□□□ 0.31
UBE2A-202ENST00000371558 STAG1Q8WVM7 1258 aa17.01■□□□□ 0.31
UBE2A-202ENST00000371558 BRF1Q92994 677 aa17.01■□□□□ 0.31
UBE2A-202ENST00000371558 USP40Q9NVE5 1235 aa17.01■□□□□ 0.31
UBE2A-202ENST00000371558 MKRN1Q9UHC7 482 aaKnown RBP17.01■□□□□ 0.31
UBE2A-202ENST00000371558 TPCN1Q9ULQ1 816 aa17.01■□□□□ 0.31
UBE2A-202ENST00000371558 LTBP3Q9NS15 1303 aa17.01■□□□□ 0.31
UBE2A-202ENST00000371558 PRC1O43663 620 aa17■□□□□ 0.31
UBE2A-202ENST00000371558 CXCL9Q07325 125 aa17■□□□□ 0.31
UBE2A-202ENST00000371558 PICALMQ13492 652 aa17■□□□□ 0.31
UBE2A-202ENST00000371558 APOBEC3HQ6NTF7 200 aaKnown RBP17■□□□□ 0.31
UBE2A-202ENST00000371558 ARHGAP27Q6ZUM4 889 aa17■□□□□ 0.31
UBE2A-202ENST00000371558 CYB5R4Q7L1T6 521 aa17■□□□□ 0.31
UBE2A-202ENST00000371558 ALDH8A1Q9H2A2 487 aaPredicted RBP17■□□□□ 0.31
UBE2A-202ENST00000371558 ANAPC4Q9UJX5 808 aa17■□□□□ 0.31
UBE2A-202ENST00000371558 FLT1P17948 1338 aa17■□□□□ 0.31
UBE2A-202ENST00000371558 MYO3BQ8WXR4 1341 aa17■□□□□ 0.31
UBE2A-202ENST00000371558 ANTXR2P58335 489 aa16.99■□□□□ 0.31
UBE2A-202ENST00000371558 DDX60LQ5H9U9 1706 aaKnown RBP16.99■□□□□ 0.31
UBE2A-202ENST00000371558 CDC42EP5Q6NZY7 148 aa16.99■□□□□ 0.31
UBE2A-202ENST00000371558 ZDHHC15Q96MV8 337 aa16.99■□□□□ 0.31
UBE2A-202ENST00000371558 RNF41Q9H4P4 317 aaPredicted RBP16.99■□□□□ 0.31
UBE2A-202ENST00000371558 GPHNQ9NQX3 736 aaPredicted RBP16.99■□□□□ 0.31
UBE2A-202ENST00000371558 KDM4AO75164 1064 aa16.99■□□□□ 0.31
UBE2A-202ENST00000371558 PRDM1O75626 825 aa16.99■□□□□ 0.31
UBE2A-202ENST00000371558 ME3Q16798 604 aa16.99■□□□□ 0.31
UBE2A-202ENST00000371558 SBK1Q52WX2 424 aa16.99■□□□□ 0.31
UBE2A-202ENST00000371558 CIAPIN1Q6FI81 312 aa16.99■□□□□ 0.31
UBE2A-202ENST00000371558 KRT23Q9C075 422 aa16.99■□□□□ 0.31
UBE2A-202ENST00000371558 CNNM2Q9H8M5 875 aa16.99■□□□□ 0.31
UBE2A-202ENST00000371558 SERPINA10Q9UK55 444 aa16.99■□□□□ 0.31
UBE2A-202ENST00000371558 POLR3DP05423 398 aaPredicted RBP16.98■□□□□ 0.31
UBE2A-202ENST00000371558 HDLBPQ00341 1268 aaKnown RBP16.98■□□□□ 0.31
UBE2A-202ENST00000371558 APOBRQ0VD83 1088 aa16.98■□□□□ 0.31
UBE2A-202ENST00000371558 STK3Q13188 491 aa16.98■□□□□ 0.31
UBE2A-202ENST00000371558 CFAP100Q494V2 611 aa16.98■□□□□ 0.31
UBE2A-202ENST00000371558 AMOTL1Q8IY63 956 aa16.98■□□□□ 0.31
UBE2A-202ENST00000371558 CACNB3P54284 484 aa16.97■□□□□ 0.31
UBE2A-202ENST00000371558 CUL4AQ13619 759 aa16.97■□□□□ 0.31
UBE2A-202ENST00000371558 C12orf60Q5U649 245 aa16.97■□□□□ 0.31
UBE2A-202ENST00000371558 CCDC83Q8IWF9 413 aa16.97■□□□□ 0.31
UBE2A-202ENST00000371558 NECAB1Q8N987 351 aa16.97■□□□□ 0.31
UBE2A-202ENST00000371558 ZSCAN31Q96LW9 406 aaPredicted RBP16.97■□□□□ 0.31
UBE2A-202ENST00000371558 MRIQ9BWK5 157 aa16.97■□□□□ 0.31
UBE2A-202ENST00000371558 DDX4Q9NQI0 724 aaKnown RBP16.97■□□□□ 0.31
UBE2A-202ENST00000371558 ZSWIM5Q9P217 1185 aa16.97■□□□□ 0.31
UBE2A-202ENST00000371558 NAP1L2Q9ULW6 460 aaPredicted RBP16.97■□□□□ 0.31
UBE2A-202ENST00000371558 SBF1O95248 1867 aa16.97■□□□□ 0.31
UBE2A-202ENST00000371558 DICER1Q9UPY3 1922 aaKnown RBP16.97■□□□□ 0.31
UBE2A-202ENST00000371558 WDHD1O75717 1129 aaPredicted RBP16.97■□□□□ 0.31
UBE2A-202ENST00000371558 PLCD1P51178 756 aa16.97■□□□□ 0.31
UBE2A-202ENST00000371558 DYNLL2Q96FJ2 89 aa16.97■□□□□ 0.31
UBE2A-202ENST00000371558 GMLQ99445 158 aa16.97■□□□□ 0.31
UBE2A-202ENST00000371558 RANBP6O60518 1105 aaKnown RBP16.96■□□□□ 0.31
UBE2A-202ENST00000371558 DTNBO60941 627 aa16.96■□□□□ 0.31
UBE2A-202ENST00000371558 SLC3A2P08195 630 aaKnown RBP16.96■□□□□ 0.31
UBE2A-202ENST00000371558 NFIAQ12857 509 aa16.96■□□□□ 0.31
UBE2A-202ENST00000371558 OGFOD1Q8N543 542 aa16.96■□□□□ 0.31
UBE2A-202ENST00000371558 ZKSCAN3Q9BRR0 538 aa16.96■□□□□ 0.31
UBE2A-202ENST00000371558 AGXT2Q9BYV1 514 aa16.96■□□□□ 0.31
UBE2A-202ENST00000371558 SH2B1Q9NRF2 756 aaPredicted RBP16.96■□□□□ 0.31
UBE2A-202ENST00000371558 HDAC9Q9UKV0 1011 aa16.96■□□□□ 0.31
UBE2A-202ENST00000371558 AGBL3Q8NEM8 1001 aa16.95■□□□□ 0.3
UBE2A-202ENST00000371558 TDRD3Q9H7E2 651 aaKnown RBP16.95■□□□□ 0.3
UBE2A-202ENST00000371558 GJA3Q9Y6H8 435 aa16.95■□□□□ 0.3
UBE2A-202ENST00000371558 WDR19Q8NEZ3 1342 aa16.95■□□□□ 0.3
UBE2A-202ENST00000371558 EIF6P56537 245 aaKnown RBP16.95■□□□□ 0.3
UBE2A-202ENST00000371558 ST3GAL1Q11201 340 aa16.95■□□□□ 0.3
UBE2A-202ENST00000371558 TNIP1Q15025 636 aa16.95■□□□□ 0.3
UBE2A-202ENST00000371558 ESR2Q92731 530 aa16.95■□□□□ 0.3
UBE2A-202ENST00000371558 PRMT6Q96LA8 375 aaPredicted RBP16.95■□□□□ 0.3
UBE2A-202ENST00000371558 MYH8P13535 1937 aa16.94■□□□□ 0.3
UBE2A-202ENST00000371558 YBX3P16989 372 aaKnown RBP eCLIP16.94■□□□□ 0.33e-7■■□□□ 11.5
UBE2A-202ENST00000371558 PDE4BQ07343 736 aa16.94■□□□□ 0.3
UBE2A-202ENST00000371558 DDX52Q9Y2R4 599 aaKnown RBP eCLIP16.94■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 78.7 ms