RNA–Protein interactions for RNA: ENST00000346436.10

CLCN6-202, Transcript of chloride voltage-gated channel 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLCN6, Length 5,583 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-202ENST00000346436 PUM3Q15397 648 aaKnown RBP12.32□□□□□ -0.44
CLCN6-202ENST00000346436 CCDC102BQ68D86 513 aa12.32□□□□□ -0.44
CLCN6-202ENST00000346436 U2AF2P26368 475 aaKnown RBP eCLIP12.31□□□□□ -0.442e-7■■■□□ 14.7
CLCN6-202ENST00000346436 KIF4BQ2VIQ3 1234 aa12.31□□□□□ -0.44
CLCN6-202ENST00000346436 FAM47CQ5HY64 1035 aa12.31□□□□□ -0.44
CLCN6-202ENST00000346436 ZKSCAN3Q9BRR0 538 aa12.31□□□□□ -0.44
CLCN6-202ENST00000346436 RGS12O14924 1447 aa12.31□□□□□ -0.44
CLCN6-202ENST00000346436 ZBTB43O43298 467 aa12.31□□□□□ -0.44
CLCN6-202ENST00000346436 ACTN2P35609 894 aa12.31□□□□□ -0.44
CLCN6-202ENST00000346436 MRPS9P82933 396 aaKnown RBP12.31□□□□□ -0.44
CLCN6-202ENST00000346436 HOOK3Q86VS8 718 aa12.31□□□□□ -0.44
CLCN6-202ENST00000346436 FAM89AQ96GI7 184 aa12.31□□□□□ -0.44
CLCN6-202ENST00000346436 METTL22Q9BUU2 404 aaPredicted RBP12.31□□□□□ -0.44
CLCN6-202ENST00000346436 TRIM6Q9C030 488 aaPredicted RBP12.31□□□□□ -0.44
CLCN6-202ENST00000346436 OSBPL3Q9H4L5 887 aa12.31□□□□□ -0.44
CLCN6-202ENST00000346436 RTKN2Q8IZC4 609 aa12.31□□□□□ -0.44
CLCN6-202ENST00000346436 ZNF496Q96IT1 587 aaPredicted RBP12.31□□□□□ -0.44
CLCN6-202ENST00000346436 ZFP91Q96JP5 570 aaPredicted RBP12.31□□□□□ -0.44
CLCN6-202ENST00000346436 CLSTN2Q9H4D0 955 aa12.31□□□□□ -0.44
CLCN6-202ENST00000346436 A0A1B0GUL7 405 aa12.31□□□□□ -0.44
CLCN6-202ENST00000346436 HOXD10P28358 340 aa12.31□□□□□ -0.44
CLCN6-202ENST00000346436 GCKRQ14397 625 aa12.31□□□□□ -0.44
CLCN6-202ENST00000346436 GADL1Q6ZQY3 521 aa12.31□□□□□ -0.44
CLCN6-202ENST00000346436 CDAN1Q8IWY9 1227 aa12.31□□□□□ -0.44
CLCN6-202ENST00000346436 KCNG4Q8TDN1 519 aa12.31□□□□□ -0.44
CLCN6-202ENST00000346436 LRRC7Q96NW7 1537 aa12.3□□□□□ -0.44
CLCN6-202ENST00000346436 SYT10Q6XYQ8 523 aa12.3□□□□□ -0.44
CLCN6-202ENST00000346436 SLC52A2Q9HAB3 445 aa12.3□□□□□ -0.44
CLCN6-202ENST00000346436 ATP7BP35670 1465 aa12.3□□□□□ -0.44
CLCN6-202ENST00000346436 GOLGA6L10A6NI86 522 aa12.3□□□□□ -0.44
CLCN6-202ENST00000346436 GIGYF1O75420 1035 aaPredicted RBP12.3□□□□□ -0.44
CLCN6-202ENST00000346436 A1BGP04217 495 aa12.3□□□□□ -0.44
CLCN6-202ENST00000346436 ZNF75DP51815 510 aa12.3□□□□□ -0.44
CLCN6-202ENST00000346436 SPECC1Q5M775 1068 aa12.3□□□□□ -0.44
CLCN6-202ENST00000346436 PIM2Q9P1W9 311 aa12.3□□□□□ -0.44
CLCN6-202ENST00000346436 IQCA1LA6NCM1 817 aa12.3□□□□□ -0.44
CLCN6-202ENST00000346436 HOXB7P09629 217 aa12.3□□□□□ -0.44
CLCN6-202ENST00000346436 PARP1P09874 1014 aaKnown RBP12.3□□□□□ -0.44
CLCN6-202ENST00000346436 RTN1Q16799 776 aa12.3□□□□□ -0.44
CLCN6-202ENST00000346436 MYRIPQ8NFW9 859 aa12.3□□□□□ -0.44
CLCN6-202ENST00000346436 STAP2Q9UGK3 403 aa12.3□□□□□ -0.44
CLCN6-202ENST00000346436 TULP4Q9NRJ4 1543 aa12.3□□□□□ -0.44
CLCN6-202ENST00000346436 ZNF500O60304 480 aaPredicted RBP12.29□□□□□ -0.44
CLCN6-202ENST00000346436 CAVIN2O95810 425 aa12.29□□□□□ -0.44
CLCN6-202ENST00000346436 IREB2P48200 963 aaKnown RBP12.29□□□□□ -0.44
CLCN6-202ENST00000346436 SPA17Q15506 151 aa12.29□□□□□ -0.44
CLCN6-202ENST00000346436 LEKR1Q6ZMV7 388 aa12.29□□□□□ -0.44
CLCN6-202ENST00000346436 NUP88Q99567 741 aaPredicted RBP12.29□□□□□ -0.44
CLCN6-202ENST00000346436 RNF216Q9NWF9 866 aaPredicted RBP12.29□□□□□ -0.44
CLCN6-202ENST00000346436 ZDHHC9Q9Y397 364 aa12.29□□□□□ -0.44
CLCN6-202ENST00000346436 NOC2LQ9Y3T9 749 aaKnown RBP12.29□□□□□ -0.44
CLCN6-202ENST00000346436 GTF2F1P35269 517 aaKnown RBP eCLIP12.29□□□□□ -0.44
CLCN6-202ENST00000346436 KANK3Q6NY19 840 aa12.29□□□□□ -0.44
CLCN6-202ENST00000346436 GIGYF2Q6Y7W6 1299 aaKnown RBP12.29□□□□□ -0.44
CLCN6-202ENST00000346436 MIGA1Q8NAN2 632 aa12.29□□□□□ -0.44
CLCN6-202ENST00000346436 KCNG1Q9UIX4 513 aa12.29□□□□□ -0.44
CLCN6-202ENST00000346436 GTPBP4Q9BZE4 634 aaKnown RBP12.29□□□□□ -0.44
CLCN6-202ENST00000346436 PYCARDQ9ULZ3 195 aa12.29□□□□□ -0.44
CLCN6-202ENST00000346436 STK24Q9Y6E0 443 aa12.29□□□□□ -0.44
CLCN6-202ENST00000346436 ZNF335Q9H4Z2 1342 aaPredicted RBP12.29□□□□□ -0.44
CLCN6-202ENST00000346436 USP8P40818 1118 aa12.29□□□□□ -0.44
CLCN6-202ENST00000346436 KMT5BQ4FZB7 885 aa12.29□□□□□ -0.44
CLCN6-202ENST00000346436 DNAJC10Q8IXB1 793 aa12.29□□□□□ -0.44
CLCN6-202ENST00000346436 CARD10Q9BWT7 1032 aa12.29□□□□□ -0.44
CLCN6-202ENST00000346436 ZSWIM6Q9HCJ5 1215 aa12.29□□□□□ -0.44
CLCN6-202ENST00000346436 PATL2C9JE40 543 aaKnown RBP12.29□□□□□ -0.44
CLCN6-202ENST00000346436 CEP152O94986 1710 aa12.29□□□□□ -0.44
CLCN6-202ENST00000346436 STX17P56962 302 aa12.29□□□□□ -0.44
CLCN6-202ENST00000346436 RPS8P62241 208 aaKnown RBP12.29□□□□□ -0.44
CLCN6-202ENST00000346436 KIAA1328Q86T90 577 aa12.29□□□□□ -0.44
CLCN6-202ENST00000346436 MYL10Q9BUA6 226 aa12.29□□□□□ -0.44
CLCN6-202ENST00000346436 MLH3Q9UHC1 1453 aa12.28□□□□□ -0.44
CLCN6-202ENST00000346436 DNA2P51530 1060 aa12.28□□□□□ -0.44
CLCN6-202ENST00000346436 ZNF589Q86UQ0 364 aaPredicted RBP12.28□□□□□ -0.44
CLCN6-202ENST00000346436 PAGR1Q9BTK6 254 aa12.28□□□□□ -0.44
CLCN6-202ENST00000346436 TMEM106CQ9BVX2 250 aa12.28□□□□□ -0.44
CLCN6-202ENST00000346436 JCADQ9P266 1359 aa12.28□□□□□ -0.44
CLCN6-202ENST00000346436 NEURL1BA8MQ27 555 aa12.28□□□□□ -0.44
CLCN6-202ENST00000346436 MAGEB6Q8N7X4 407 aa12.28□□□□□ -0.44
CLCN6-202ENST00000346436 CHURC1Q8WUH1 139 aa12.28□□□□□ -0.44
CLCN6-202ENST00000346436 NRBP1Q9UHY1 535 aa12.28□□□□□ -0.44
CLCN6-202ENST00000346436 NLRP1Q9C000 1473 aa12.28□□□□□ -0.44
CLCN6-202ENST00000346436 LAMC1P11047 1609 aa12.28□□□□□ -0.44
CLCN6-202ENST00000346436 KIF5CO60282 957 aa12.28□□□□□ -0.44
CLCN6-202ENST00000346436 ITGA6P23229 1130 aa12.28□□□□□ -0.44
CLCN6-202ENST00000346436 FAM160A1Q05DH4 1040 aa12.28□□□□□ -0.44
CLCN6-202ENST00000346436 CUL4AQ13619 759 aa12.28□□□□□ -0.44
CLCN6-202ENST00000346436 GOLGA1Q92805 767 aa12.28□□□□□ -0.44
CLCN6-202ENST00000346436 RTEL1Q9NZ71 1219 aa12.28□□□□□ -0.44
CLCN6-202ENST00000346436 GNPTABQ3T906 1256 aa12.27□□□□□ -0.44
CLCN6-202ENST00000346436 B4E1Z4 1266 aa12.27□□□□□ -0.44
CLCN6-202ENST00000346436 RSPH3Q86UC2 560 aa12.27□□□□□ -0.44
CLCN6-202ENST00000346436 MROH5Q6ZUA9 1318 aa12.27□□□□□ -0.45
CLCN6-202ENST00000346436 HECW2Q9P2P5 1572 aa12.27□□□□□ -0.45
CLCN6-202ENST00000346436 CDK12Q9NYV4 1490 aaPredicted RBP12.27□□□□□ -0.45
CLCN6-202ENST00000346436 ERLIN1O75477 346 aa12.27□□□□□ -0.45
CLCN6-202ENST00000346436 FAM13AO94988 1023 aa12.27□□□□□ -0.45
CLCN6-202ENST00000346436 KARSQ15046 597 aaKnown RBP12.27□□□□□ -0.45
CLCN6-202ENST00000346436 TTLL6Q8N841 843 aa12.27□□□□□ -0.45
CLCN6-202ENST00000346436 FTOQ9C0B1 505 aaKnown RBP eCLIP12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms