RNA–Protein interactions for RNA: ENST00000344129.2

CT55-202, Transcript of cancer/testis antigen 55, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CT55, Length 1,728 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CT55-202ENST00000344129 Q6ZUG5 572 aa15.03■□□□□ -0
CT55-202ENST00000344129 ARHGAP27Q6ZUM4 889 aa15.03■□□□□ -0
CT55-202ENST00000344129 RALYLQ86SE5 291 aaKnown RBP15.03■□□□□ -0
CT55-202ENST00000344129 NCOA7Q8NI08 942 aa15.03■□□□□ -0
CT55-202ENST00000344129 USP40Q9NVE5 1235 aa15.03■□□□□ -0
CT55-202ENST00000344129 SAP30BPQ9UHR5 308 aaKnown RBP15.03■□□□□ -0
CT55-202ENST00000344129 CDK5RAP2Q96SN8 1893 aa15.03■□□□□ -0
CT55-202ENST00000344129 PLCG2P16885 1265 aa15.03■□□□□ -0
CT55-202ENST00000344129 EXOSC10Q01780 885 aaKnown RBP15.03■□□□□ -0
CT55-202ENST00000344129 RRP12Q5JTH9 1297 aaKnown RBP15.03■□□□□ -0
CT55-202ENST00000344129 AKNAD1Q5T1N1 836 aa15.03■□□□□ -0
CT55-202ENST00000344129 APOBEC3HQ6NTF7 200 aaKnown RBP15.03■□□□□ -0
CT55-202ENST00000344129 MB21D2Q8IYB1 491 aaPredicted RBP15.03■□□□□ -0
CT55-202ENST00000344129 TOMM22Q9NS69 142 aa15.03■□□□□ -0
CT55-202ENST00000344129 MKRN1Q9UHC7 482 aaKnown RBP15.03■□□□□ -0
CT55-202ENST00000344129 TIAM2Q8IVF5 1701 aa15.02■□□□□ -0
CT55-202ENST00000344129 NAV1Q8NEY1 1877 aa15.02■□□□□ -0
CT55-202ENST00000344129 B4E1Z4 1266 aa15.02□□□□□ -0.01
CT55-202ENST00000344129 LARGE1O95461 756 aa15.02□□□□□ -0.01
CT55-202ENST00000344129 FGD1P98174 961 aa15.02□□□□□ -0.01
CT55-202ENST00000344129 TRDNQ13061 729 aa15.02□□□□□ -0.01
CT55-202ENST00000344129 PICALMQ13492 652 aa15.02□□□□□ -0.01
CT55-202ENST00000344129 MFSD6Q6ZSS7 791 aa15.02□□□□□ -0.01
CT55-202ENST00000344129 CERS3Q8IU89 383 aa15.02□□□□□ -0.01
CT55-202ENST00000344129 LIMCH1Q9UPQ0 1083 aa15.02□□□□□ -0.01
CT55-202ENST00000344129 FLT1P17948 1338 aa15.01□□□□□ -0.01
CT55-202ENST00000344129 PRC1O43663 620 aa15.01□□□□□ -0.01
CT55-202ENST00000344129 ANTXR2P58335 489 aa15.01□□□□□ -0.01
CT55-202ENST00000344129 CIAPIN1Q6FI81 312 aa15.01□□□□□ -0.01
CT55-202ENST00000344129 CDC42EP5Q6NZY7 148 aa15.01□□□□□ -0.01
CT55-202ENST00000344129 CYB5R4Q7L1T6 521 aa15.01□□□□□ -0.01
CT55-202ENST00000344129 STAG1Q8WVM7 1258 aa15.01□□□□□ -0.01
CT55-202ENST00000344129 ZDHHC15Q96MV8 337 aa15.01□□□□□ -0.01
CT55-202ENST00000344129 GMLQ99445 158 aa15.01□□□□□ -0.01
CT55-202ENST00000344129 ALDH8A1Q9H2A2 487 aaPredicted RBP15.01□□□□□ -0.01
CT55-202ENST00000344129 GPHNQ9NQX3 736 aaPredicted RBP15.01□□□□□ -0.01
CT55-202ENST00000344129 ARPP21Q9UBL0 812 aaPredicted RBP15.01□□□□□ -0.01
CT55-202ENST00000344129 ANAPC4Q9UJX5 808 aa15.01□□□□□ -0.01
CT55-202ENST00000344129 TPCN1Q9ULQ1 816 aa15.01□□□□□ -0.01
CT55-202ENST00000344129 LAMB1P07942 1786 aa15.01□□□□□ -0.01
CT55-202ENST00000344129 MYO3BQ8WXR4 1341 aa15.01□□□□□ -0.01
CT55-202ENST00000344129 PRDM1O75626 825 aa15□□□□□ -0.01
CT55-202ENST00000344129 MCM5P33992 734 aa15□□□□□ -0.01
CT55-202ENST00000344129 CFAP100Q494V2 611 aa15□□□□□ -0.01
CT55-202ENST00000344129 IL27Q8NEV9 243 aa15□□□□□ -0.01
CT55-202ENST00000344129 BRF1Q92994 677 aa15□□□□□ -0.01
CT55-202ENST00000344129 SERPINA10Q9UK55 444 aa15□□□□□ -0.01
CT55-202ENST00000344129 KDM4AO75164 1064 aa15□□□□□ -0.01
CT55-202ENST00000344129 WDHD1O75717 1129 aaPredicted RBP15□□□□□ -0.01
CT55-202ENST00000344129 POLR3DP05423 398 aaPredicted RBP15□□□□□ -0.01
CT55-202ENST00000344129 YBX3P16989 372 aaKnown RBP eCLIP15□□□□□ -0.014e-8■■□□□ 14.5
CT55-202ENST00000344129 CACNB3P54284 484 aa15□□□□□ -0.01
CT55-202ENST00000344129 HDLBPQ00341 1268 aaKnown RBP15□□□□□ -0.01
CT55-202ENST00000344129 ANKRD1Q15327 319 aa15□□□□□ -0.01
CT55-202ENST00000344129 SBK1Q52WX2 424 aa15□□□□□ -0.01
CT55-202ENST00000344129 MRIQ9BWK5 157 aa15□□□□□ -0.01
CT55-202ENST00000344129 DDX4Q9NQI0 724 aaKnown RBP15□□□□□ -0.01
CT55-202ENST00000344129 APOBRQ0VD83 1088 aa14.99□□□□□ -0.01
CT55-202ENST00000344129 ME3Q16798 604 aa14.99□□□□□ -0.01
CT55-202ENST00000344129 C12orf60Q5U649 245 aa14.99□□□□□ -0.01
CT55-202ENST00000344129 NECAB1Q8N987 351 aa14.99□□□□□ -0.01
CT55-202ENST00000344129 DYNLL2Q96FJ2 89 aa14.99□□□□□ -0.01
CT55-202ENST00000344129 RNF41Q9H4P4 317 aaPredicted RBP14.99□□□□□ -0.01
CT55-202ENST00000344129 CNNM2Q9H8M5 875 aa14.99□□□□□ -0.01
CT55-202ENST00000344129 SHTN1A0MZ66 631 aa14.98□□□□□ -0.01
CT55-202ENST00000344129 DTNBO60941 627 aa14.98□□□□□ -0.01
CT55-202ENST00000344129 PLCD1P51178 756 aa14.98□□□□□ -0.01
CT55-202ENST00000344129 NFIAQ12857 509 aa14.98□□□□□ -0.01
CT55-202ENST00000344129 STK3Q13188 491 aa14.98□□□□□ -0.01
CT55-202ENST00000344129 TNIP1Q15025 636 aa14.98□□□□□ -0.01
CT55-202ENST00000344129 PRMT6Q96LA8 375 aaPredicted RBP14.98□□□□□ -0.01
CT55-202ENST00000344129 KRT23Q9C075 422 aa14.98□□□□□ -0.01
CT55-202ENST00000344129 ZSWIM5Q9P217 1185 aa14.98□□□□□ -0.01
CT55-202ENST00000344129 GJA3Q9Y6H8 435 aa14.98□□□□□ -0.01
CT55-202ENST00000344129 FOCADQ5VW36 1801 aa14.98□□□□□ -0.01
CT55-202ENST00000344129 EIF6P56537 245 aaKnown RBP14.97□□□□□ -0.01
CT55-202ENST00000344129 CUL4AQ13619 759 aa14.97□□□□□ -0.01
CT55-202ENST00000344129 CCDC83Q8IWF9 413 aa14.97□□□□□ -0.01
CT55-202ENST00000344129 AMOTL1Q8IY63 956 aa14.97□□□□□ -0.01
CT55-202ENST00000344129 AGBL3Q8NEM8 1001 aa14.97□□□□□ -0.01
CT55-202ENST00000344129 ZSCAN31Q96LW9 406 aaPredicted RBP14.97□□□□□ -0.01
CT55-202ENST00000344129 ZKSCAN3Q9BRR0 538 aa14.97□□□□□ -0.01
CT55-202ENST00000344129 TDRD3Q9H7E2 651 aaKnown RBP14.97□□□□□ -0.01
CT55-202ENST00000344129 HDAC9Q9UKV0 1011 aa14.97□□□□□ -0.01
CT55-202ENST00000344129 NAP1L2Q9ULW6 460 aaPredicted RBP14.97□□□□□ -0.01
CT55-202ENST00000344129 DDX60LQ5H9U9 1706 aaKnown RBP14.97□□□□□ -0.01
CT55-202ENST00000344129 ZNF541Q9H0D2 1346 aa14.97□□□□□ -0.01
CT55-202ENST00000344129 ECM29Q5VYK3 1845 aa14.97□□□□□ -0.01
CT55-202ENST00000344129 FZD9O00144 591 aa14.97□□□□□ -0.01
CT55-202ENST00000344129 SLC3A2P08195 630 aaKnown RBP14.97□□□□□ -0.01
CT55-202ENST00000344129 OGFOD1Q8N543 542 aa14.97□□□□□ -0.01
CT55-202ENST00000344129 DDX52Q9Y2R4 599 aaKnown RBP eCLIP14.97□□□□□ -0.01
CT55-202ENST00000344129 SRCAPQ6ZRS2 3230 aa14.97□□□□□ -0.01
CT55-202ENST00000344129 MYH1P12882 1939 aa14.97□□□□□ -0.01
CT55-202ENST00000344129 RANBP6O60518 1105 aaKnown RBP14.96□□□□□ -0.01
CT55-202ENST00000344129 LMNB1P20700 586 aa14.96□□□□□ -0.01
CT55-202ENST00000344129 ST3GAL1Q11201 340 aa14.96□□□□□ -0.01
CT55-202ENST00000344129 TCP10Q12799 353 aa14.96□□□□□ -0.01
CT55-202ENST00000344129 DLGAP5Q15398 846 aa14.96□□□□□ -0.01
CT55-202ENST00000344129 ZFPM1Q8IX07 1006 aa14.96□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms